RNA–Protein interactions for RNA: ENST00000440927.1

SCML4-206, Transcript of Scm polycomb group protein like 4, humanhuman

TSL 3

Gene SCML4, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4-206ENST00000440927 ZBTB1Q9Y2K1 713 aa17.11■□□□□ 0.33
SCML4-206ENST00000440927 KIF3CO14782 793 aa17.1■□□□□ 0.33
SCML4-206ENST00000440927 U2SURPO15042 1029 aaKnown RBP17.1■□□□□ 0.33
SCML4-206ENST00000440927 TTC5Q8N0Z6 440 aa17.1■□□□□ 0.33
SCML4-206ENST00000440927 CEP350Q5VT06 3117 aa17.1■□□□□ 0.33
SCML4-206ENST00000440927 GNAT3A8MTJ3 354 aa17.09■□□□□ 0.33
SCML4-206ENST00000440927 DALRD3Q5D0E6 543 aaKnown RBP17.09■□□□□ 0.33
SCML4-206ENST00000440927 NRXN2Q9P2S2 1712 aa17.09■□□□□ 0.33
SCML4-206ENST00000440927 HSPA6P17066 643 aa17.08■□□□□ 0.32
SCML4-206ENST00000440927 TEFQ10587 303 aa17.08■□□□□ 0.32
SCML4-206ENST00000440927 IL17REQ8NFR9 667 aa17.08■□□□□ 0.32
SCML4-206ENST00000440927 SIPA1L3O60292 1781 aaPredicted RBP17.07■□□□□ 0.32
SCML4-206ENST00000440927 STARD3NLO95772 234 aa17.07■□□□□ 0.32
SCML4-206ENST00000440927 NFIXQ14938 502 aa17.07■□□□□ 0.32
SCML4-206ENST00000440927 ZNF790Q6PG37 636 aa17.07■□□□□ 0.32
SCML4-206ENST00000440927 BCL2L12Q9HB09 334 aa17.07■□□□□ 0.32
SCML4-206ENST00000440927 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
SCML4-206ENST00000440927 HEG1Q9ULI3 1381 aa17.06■□□□□ 0.32
SCML4-206ENST00000440927 CHRNA5P30532 468 aa17.06■□□□□ 0.32
SCML4-206ENST00000440927 CFAP53Q96M91 514 aa17.06■□□□□ 0.32
SCML4-206ENST00000440927 TEX13AQ9BXU3 409 aaPredicted RBP17.06■□□□□ 0.32
SCML4-206ENST00000440927 AFDNP55196 1824 aaKnown RBP17.05■□□□□ 0.32
SCML4-206ENST00000440927 A0A087WZG4 1122 aa17.05■□□□□ 0.32
SCML4-206ENST00000440927 CANXP27824 592 aaKnown RBP17.05■□□□□ 0.32
SCML4-206ENST00000440927 EIF5P55010 431 aaKnown RBP17.05■□□□□ 0.32
SCML4-206ENST00000440927 CNGB1Q14028 1251 aaPredicted RBP17.05■□□□□ 0.32
SCML4-206ENST00000440927 ZNF496Q96IT1 587 aaPredicted RBP17.05■□□□□ 0.32
SCML4-206ENST00000440927 C9orf131Q5VYM1 1079 aa17.04■□□□□ 0.32
SCML4-206ENST00000440927 RSPH6AQ9H0K4 717 aa17.04■□□□□ 0.32
SCML4-206ENST00000440927 DLEC1Q9Y238 1755 aa17.03■□□□□ 0.32
SCML4-206ENST00000440927 TOMM70O94826 608 aa17.03■□□□□ 0.32
SCML4-206ENST00000440927 SERPINB2P05120 415 aa17.03■□□□□ 0.32
SCML4-206ENST00000440927 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
SCML4-206ENST00000440927 SCN7AQ01118 1682 aa17.03■□□□□ 0.32
SCML4-206ENST00000440927 IL6STP40189 918 aaPredicted RBP17.02■□□□□ 0.32
SCML4-206ENST00000440927 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.32
SCML4-206ENST00000440927 FMNL2Q96PY5 1086 aa17.02■□□□□ 0.32
SCML4-206ENST00000440927 NUDCQ9Y266 331 aa17.02■□□□□ 0.32
SCML4-206ENST00000440927 PPP2R1AP30153 589 aa17■□□□□ 0.31
SCML4-206ENST00000440927 NMRK2Q9NPI5 230 aa17■□□□□ 0.31
SCML4-206ENST00000440927 RNF181Q9P0P0 153 aa17■□□□□ 0.31
SCML4-206ENST00000440927 KDM2BQ8NHM5 1336 aa16.99■□□□□ 0.31
SCML4-206ENST00000440927 ZC3H4Q9UPT8 1303 aaKnown RBP16.99■□□□□ 0.31
SCML4-206ENST00000440927 BTBD11A6QL63 1104 aa16.99■□□□□ 0.31
SCML4-206ENST00000440927 PDZRN3Q9UPQ7 1066 aa16.99■□□□□ 0.31
SCML4-206ENST00000440927 CARMIL3Q8ND23 1372 aa16.99■□□□□ 0.31
SCML4-206ENST00000440927 SBF1O95248 1867 aa16.99■□□□□ 0.31
SCML4-206ENST00000440927 APLP1P51693 650 aa16.98■□□□□ 0.31
SCML4-206ENST00000440927 TBC1D9BQ66K14 1250 aa16.98■□□□□ 0.31
SCML4-206ENST00000440927 C2CD5Q86YS7 1000 aa16.98■□□□□ 0.31
SCML4-206ENST00000440927 TTLL6Q8N841 843 aa16.98■□□□□ 0.31
SCML4-206ENST00000440927 H0YIN7 160 aa16.97■□□□□ 0.31
SCML4-206ENST00000440927 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
SCML4-206ENST00000440927 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
SCML4-206ENST00000440927 BICDL1Q6ZP65 573 aa16.97■□□□□ 0.31
SCML4-206ENST00000440927 RBM46Q8TBY0 533 aaKnown RBP16.97■□□□□ 0.31
SCML4-206ENST00000440927 KCNQ3O43525 872 aa16.96■□□□□ 0.31
SCML4-206ENST00000440927 A1BGP04217 495 aa16.96■□□□□ 0.31
SCML4-206ENST00000440927 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
SCML4-206ENST00000440927 RTF1Q92541 710 aaKnown RBP16.96■□□□□ 0.31
SCML4-206ENST00000440927 BRIP1Q9BX63 1249 aa16.96■□□□□ 0.31
SCML4-206ENST00000440927 TBC1D2BQ9UPU7 963 aa16.96■□□□□ 0.31
SCML4-206ENST00000440927 ZNF330Q9Y3S2 320 aaPredicted RBP16.96■□□□□ 0.31
SCML4-206ENST00000440927 TNRC6CQ9HCJ0 1690 aaKnown RBP16.96■□□□□ 0.31
SCML4-206ENST00000440927 ANKRD31Q8N7Z5 1873 aa16.95■□□□□ 0.3
SCML4-206ENST00000440927 BCORQ6W2J9 1755 aa16.95■□□□□ 0.3
SCML4-206ENST00000440927 HTATSF1O43719 755 aaKnown RBP16.95■□□□□ 0.3
SCML4-206ENST00000440927 CAMTA2O94983 1202 aa16.95■□□□□ 0.3
SCML4-206ENST00000440927 RASSF7Q02833 373 aa16.95■□□□□ 0.3
SCML4-206ENST00000440927 LMNB1P20700 586 aa16.94■□□□□ 0.3
SCML4-206ENST00000440927 PDE6BP35913 854 aa16.94■□□□□ 0.3
SCML4-206ENST00000440927 PRR5LQ6MZQ0 368 aa16.94■□□□□ 0.3
SCML4-206ENST00000440927 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
SCML4-206ENST00000440927 SNRPA1P09661 255 aaKnown RBP16.93■□□□□ 0.3
SCML4-206ENST00000440927 FSTL1Q12841 308 aa16.93■□□□□ 0.3
SCML4-206ENST00000440927 MCM10Q7L590 875 aa16.93■□□□□ 0.3
SCML4-206ENST00000440927 DZIP3Q86Y13 1208 aaKnown RBP16.93■□□□□ 0.3
SCML4-206ENST00000440927 SETDB2Q96T68 719 aa16.93■□□□□ 0.3
SCML4-206ENST00000440927 USP16Q9Y5T5 823 aa16.93■□□□□ 0.3
SCML4-206ENST00000440927 NFKBIEO00221 500 aa16.92■□□□□ 0.3
SCML4-206ENST00000440927 COL11A2P13942 1736 aaPredicted RBP16.92■□□□□ 0.3
SCML4-206ENST00000440927 RGL2O15211 777 aa16.91■□□□□ 0.3
SCML4-206ENST00000440927 PRELPP51888 382 aa16.91■□□□□ 0.3
SCML4-206ENST00000440927 CLEC4GQ6UXB4 293 aa16.91■□□□□ 0.3
SCML4-206ENST00000440927 CNBD1Q8NA66 436 aa16.91■□□□□ 0.3
SCML4-206ENST00000440927 RRAGCQ9HB90 399 aa16.91■□□□□ 0.3
SCML4-206ENST00000440927 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
SCML4-206ENST00000440927 TIAM2Q8IVF5 1701 aa16.9■□□□□ 0.3
SCML4-206ENST00000440927 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
SCML4-206ENST00000440927 PRAMEF22A3QJZ6 481 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 ST5P78524 1137 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 DCTN1Q14203 1278 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 DNAJC5GQ8N7S2 189 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 ZNF652Q9Y2D9 606 aa16.89■□□□□ 0.29
SCML4-206ENST00000440927 NPHP1O15259 732 aa16.88■□□□□ 0.29
SCML4-206ENST00000440927 TAF7Q15545 349 aaPredicted RBP16.88■□□□□ 0.29
SCML4-206ENST00000440927 STYK1Q6J9G0 422 aa16.88■□□□□ 0.29
SCML4-206ENST00000440927 CCDC24Q8N4L8 307 aa16.88■□□□□ 0.29
SCML4-206ENST00000440927 LTBP3Q9NS15 1303 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms