RNA–Protein interactions for RNA: ENST00000440552.5

PTPRN-205, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-205ENST00000440552 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
PTPRN-205ENST00000440552 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
PTPRN-205ENST00000440552 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
PTPRN-205ENST00000440552 NFIXQ14938 502 aa19.29■□□□□ 0.68
PTPRN-205ENST00000440552 VSIG10Q8N0Z9 540 aa19.29■□□□□ 0.68
PTPRN-205ENST00000440552 PCGF6Q9BYE7 350 aa19.29■□□□□ 0.68
PTPRN-205ENST00000440552 NRXN2Q9P2S2 1712 aa19.28■□□□□ 0.68
PTPRN-205ENST00000440552 TNRC6CQ9HCJ0 1690 aaKnown RBP19.28■□□□□ 0.68
PTPRN-205ENST00000440552 AFDNP55196 1824 aaKnown RBP19.28■□□□□ 0.68
PTPRN-205ENST00000440552 JMYQ8N9B5 988 aa19.27■□□□□ 0.68
PTPRN-205ENST00000440552 KLRG1Q96E93 195 aa19.27■□□□□ 0.68
PTPRN-205ENST00000440552 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
PTPRN-205ENST00000440552 COL15A1P39059 1388 aa19.27■□□□□ 0.68
PTPRN-205ENST00000440552 SLC39A6Q13433 755 aa19.26■□□□□ 0.67
PTPRN-205ENST00000440552 BCL2L12Q9HB09 334 aa19.26■□□□□ 0.67
PTPRN-205ENST00000440552 ZBTB1Q9Y2K1 713 aa19.26■□□□□ 0.67
PTPRN-205ENST00000440552 VIRMAQ69YN4 1812 aaKnown RBP19.25■□□□□ 0.67
PTPRN-205ENST00000440552 DLEC1Q9Y238 1755 aa19.25■□□□□ 0.67
PTPRN-205ENST00000440552 SERPINB2P05120 415 aa19.24■□□□□ 0.67
PTPRN-205ENST00000440552 LMNB1P20700 586 aa19.24■□□□□ 0.67
PTPRN-205ENST00000440552 MTHFSDQ2M296 383 aaKnown RBP19.24■□□□□ 0.67
PTPRN-205ENST00000440552 SMC1BQ8NDV3 1235 aa19.24■□□□□ 0.67
PTPRN-205ENST00000440552 HMOX1P09601 288 aa19.23■□□□□ 0.67
PTPRN-205ENST00000440552 TTLL6Q8N841 843 aa19.23■□□□□ 0.67
PTPRN-205ENST00000440552 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
PTPRN-205ENST00000440552 HTRA3P83110 453 aa19.22■□□□□ 0.67
PTPRN-205ENST00000440552 RASSF7Q02833 373 aa19.22■□□□□ 0.67
PTPRN-205ENST00000440552 A0A087WZG4 1122 aa19.21■□□□□ 0.67
PTPRN-205ENST00000440552 GLTPD2A6NH11 291 aa19.21■□□□□ 0.67
PTPRN-205ENST00000440552 DIAPH1O60610 1272 aaKnown RBP19.21■□□□□ 0.67
PTPRN-205ENST00000440552 STARD3NLO95772 234 aa19.21■□□□□ 0.67
PTPRN-205ENST00000440552 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
PTPRN-205ENST00000440552 H0YIN7 160 aa19.2■□□□□ 0.66
PTPRN-205ENST00000440552 VEGFAP15692 232 aaPredicted RBP19.2■□□□□ 0.66
PTPRN-205ENST00000440552 PRELPP51888 382 aa19.2■□□□□ 0.66
PTPRN-205ENST00000440552 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
PTPRN-205ENST00000440552 PDZRN3Q9UPQ7 1066 aa19.2■□□□□ 0.66
PTPRN-205ENST00000440552 PER1O15534 1290 aaPredicted RBP19.19■□□□□ 0.66
PTPRN-205ENST00000440552 CANXP27824 592 aaKnown RBP19.19■□□□□ 0.66
PTPRN-205ENST00000440552 TTC5Q8N0Z6 440 aa19.18■□□□□ 0.66
PTPRN-205ENST00000440552 TEX13AQ9BXU3 409 aaPredicted RBP19.18■□□□□ 0.66
PTPRN-205ENST00000440552 KIF7Q2M1P5 1343 aa19.18■□□□□ 0.66
PTPRN-205ENST00000440552 CARMIL3Q8ND23 1372 aa19.18■□□□□ 0.66
PTPRN-205ENST00000440552 NFKBIEO00221 500 aa19.17■□□□□ 0.66
PTPRN-205ENST00000440552 CCDC88AQ3V6T2 1871 aa19.16■□□□□ 0.66
PTPRN-205ENST00000440552 BRIP1Q9BX63 1249 aa19.16■□□□□ 0.66
PTPRN-205ENST00000440552 ZNF496Q96IT1 587 aaPredicted RBP19.15■□□□□ 0.66
PTPRN-205ENST00000440552 HEG1Q9ULI3 1381 aa19.15■□□□□ 0.66
PTPRN-205ENST00000440552 TIAM2Q8IVF5 1701 aa19.14■□□□□ 0.66
PTPRN-205ENST00000440552 ANKRD31Q8N7Z5 1873 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 PDE6BP35913 854 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 IL6STP40189 918 aaPredicted RBP19.14■□□□□ 0.65
PTPRN-205ENST00000440552 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 BICDL1Q6ZP65 573 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 IL17REQ8NFR9 667 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 NPC1L1Q9UHC9 1359 aa19.14■□□□□ 0.65
PTPRN-205ENST00000440552 COL3A1P02461 1466 aaPredicted RBP19.14■□□□□ 0.65
PTPRN-205ENST00000440552 GNAT3A8MTJ3 354 aa19.13■□□□□ 0.65
PTPRN-205ENST00000440552 TEFQ10587 303 aa19.13■□□□□ 0.65
PTPRN-205ENST00000440552 COL13A1Q5TAT6 717 aaPredicted RBP19.13■□□□□ 0.65
PTPRN-205ENST00000440552 SCN7AQ01118 1682 aa19.13■□□□□ 0.65
PTPRN-205ENST00000440552 DICER1Q9UPY3 1922 aaKnown RBP19.12■□□□□ 0.65
PTPRN-205ENST00000440552 SIPA1L3O60292 1781 aaPredicted RBP19.12■□□□□ 0.65
PTPRN-205ENST00000440552 POTECB2RU33 542 aa19.12■□□□□ 0.65
PTPRN-205ENST00000440552 PRR5LQ6MZQ0 368 aa19.12■□□□□ 0.65
PTPRN-205ENST00000440552 DPY19L2Q6NUT2 758 aa19.12■□□□□ 0.65
PTPRN-205ENST00000440552 FER1L6Q2WGJ9 1857 aa19.11■□□□□ 0.65
PTPRN-205ENST00000440552 LTBP3Q9NS15 1303 aa19.11■□□□□ 0.65
PTPRN-205ENST00000440552 CC2D1BQ5T0F9 858 aaKnown RBP19.11■□□□□ 0.65
PTPRN-205ENST00000440552 CCER1Q8TC90 406 aaPredicted RBP19.11■□□□□ 0.65
PTPRN-205ENST00000440552 ZNF622Q969S3 477 aaKnown RBP eCLIP19.11■□□□□ 0.65
PTPRN-205ENST00000440552 FMNL2Q96PY5 1086 aa19.11■□□□□ 0.65
PTPRN-205ENST00000440552 PCNTO95613 3336 aa19.11■□□□□ 0.65
PTPRN-205ENST00000440552 TBC1D2BQ9UPU7 963 aa19.1■□□□□ 0.65
PTPRN-205ENST00000440552 CEMIPQ8WUJ3 1361 aa19.09■□□□□ 0.65
PTPRN-205ENST00000440552 COL11A2P13942 1736 aaPredicted RBP19.09■□□□□ 0.65
PTPRN-205ENST00000440552 C21orf2O43822 256 aa19.09■□□□□ 0.65
PTPRN-205ENST00000440552 CAMTA2O94983 1202 aa19.08■□□□□ 0.64
PTPRN-205ENST00000440552 ERFEQ4G0M1 354 aa19.08■□□□□ 0.64
PTPRN-205ENST00000440552 STYK1Q6J9G0 422 aa19.08■□□□□ 0.64
PTPRN-205ENST00000440552 CNKSR1Q969H4 720 aa19.08■□□□□ 0.64
PTPRN-205ENST00000440552 SETDB2Q96T68 719 aa19.08■□□□□ 0.64
PTPRN-205ENST00000440552 U2SURPO15042 1029 aaKnown RBP19.07■□□□□ 0.64
PTPRN-205ENST00000440552 A1BGP04217 495 aa19.07■□□□□ 0.64
PTPRN-205ENST00000440552 SOGA3Q5TF21 947 aa19.07■□□□□ 0.64
PTPRN-205ENST00000440552 NPM2Q86SE8 214 aaKnown RBP19.07■□□□□ 0.64
PTPRN-205ENST00000440552 CNBD1Q8NA66 436 aa19.07■□□□□ 0.64
PTPRN-205ENST00000440552 TAOK3Q9H2K8 898 aa19.07■□□□□ 0.64
PTPRN-205ENST00000440552 SRGNP10124 158 aa19.06■□□□□ 0.64
PTPRN-205ENST00000440552 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
PTPRN-205ENST00000440552 ST5P78524 1137 aa19.05■□□□□ 0.64
PTPRN-205ENST00000440552 TNS4Q8IZW8 715 aa19.05■□□□□ 0.64
PTPRN-205ENST00000440552 CCDC24Q8N4L8 307 aa19.05■□□□□ 0.64
PTPRN-205ENST00000440552 MASTLQ96GX5 879 aa19.05■□□□□ 0.64
PTPRN-205ENST00000440552 SLX4Q8IY92 1834 aa19.04■□□□□ 0.64
PTPRN-205ENST00000440552 ARFGEF2Q9Y6D5 1785 aa19.04■□□□□ 0.64
PTPRN-205ENST00000440552 HSPA1AP0DMV8 641 aaKnown RBP19.04■□□□□ 0.64
PTPRN-205ENST00000440552 HSPA1BP0DMV9 641 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms