RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 SMC1BQ8NDV3 1235 aa28.13■■■□□ 2.09
TRIM39-210ENST00000440271 NARFQ9UHQ1 456 aa28.13■■■□□ 2.09
TRIM39-210ENST00000440271 SCN11AQ9UI33 1791 aa28.13■■■□□ 2.09
TRIM39-210ENST00000440271 RASSF7Q02833 373 aa28.12■■■□□ 2.09
TRIM39-210ENST00000440271 COL13A1Q5TAT6 717 aaPredicted RBP28.12■■■□□ 2.09
TRIM39-210ENST00000440271 SLC39A6Q13433 755 aa28.11■■■□□ 2.09
TRIM39-210ENST00000440271 ZC3H4Q9UPT8 1303 aaKnown RBP28.11■■■□□ 2.09
TRIM39-210ENST00000440271 RNMTO43148 476 aaKnown RBP28.09■■■□□ 2.09
TRIM39-210ENST00000440271 KNSTRNQ9Y448 316 aa28.09■■■□□ 2.09
TRIM39-210ENST00000440271 TNRC6CQ9HCJ0 1690 aaKnown RBP28.09■■■□□ 2.09
TRIM39-210ENST00000440271 SERPINB2P05120 415 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 LMNB1P20700 586 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 BCL2L12Q9HB09 334 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 ZBTB1Q9Y2K1 713 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 CLSPNQ9HAW4 1339 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 COL15A1P39059 1388 aa28.08■■■□□ 2.09
TRIM39-210ENST00000440271 PRELPP51888 382 aa28.07■■■□□ 2.08
TRIM39-210ENST00000440271 GLTPD2A6NH11 291 aa28.06■■■□□ 2.08
TRIM39-210ENST00000440271 TTLL6Q8N841 843 aa28.06■■■□□ 2.08
TRIM39-210ENST00000440271 VEGFAP15692 232 aaPredicted RBP28.05■■■□□ 2.08
TRIM39-210ENST00000440271 AFDNP55196 1824 aaKnown RBP28.04■■■□□ 2.08
TRIM39-210ENST00000440271 HMOX1P09601 288 aa28.04■■■□□ 2.08
TRIM39-210ENST00000440271 C2CD5Q86YS7 1000 aa28.04■■■□□ 2.08
TRIM39-210ENST00000440271 MRC1P22897 1456 aa28.03■■■□□ 2.08
TRIM39-210ENST00000440271 VSIG10Q8N0Z9 540 aa28.03■■■□□ 2.08
TRIM39-210ENST00000440271 NRXN2Q9P2S2 1712 aa28.03■■■□□ 2.08
TRIM39-210ENST00000440271 H0YIN7 160 aa28.02■■■□□ 2.08
TRIM39-210ENST00000440271 MTHFSDQ2M296 383 aaKnown RBP28.02■■■□□ 2.08
TRIM39-210ENST00000440271 PCGF6Q9BYE7 350 aa28.02■■■□□ 2.08
TRIM39-210ENST00000440271 CANXP27824 592 aaKnown RBP28.01■■■□□ 2.07
TRIM39-210ENST00000440271 AMER1Q5JTC6 1135 aaPredicted RBP28■■■□□ 2.07
TRIM39-210ENST00000440271 NFKBIEO00221 500 aa27.99■■■□□ 2.07
TRIM39-210ENST00000440271 BICDL1Q6ZP65 573 aa27.99■■■□□ 2.07
TRIM39-210ENST00000440271 CARMIL3Q8ND23 1372 aa27.99■■■□□ 2.07
TRIM39-210ENST00000440271 DLEC1Q9Y238 1755 aa27.97■■■□□ 2.07
TRIM39-210ENST00000440271 EIF5P55010 431 aaKnown RBP27.97■■■□□ 2.07
TRIM39-210ENST00000440271 TNS4Q8IZW8 715 aa27.97■■■□□ 2.07
TRIM39-210ENST00000440271 STARD3NLO95772 234 aa27.96■■■□□ 2.07
TRIM39-210ENST00000440271 A0A087WZG4 1122 aa27.95■■■□□ 2.06
TRIM39-210ENST00000440271 POTECB2RU33 542 aa27.95■■■□□ 2.06
TRIM39-210ENST00000440271 CAPN15O75808 1086 aa27.95■■■□□ 2.06
TRIM39-210ENST00000440271 DPY19L2Q6NUT2 758 aa27.94■■■□□ 2.06
TRIM39-210ENST00000440271 TTC5Q8N0Z6 440 aa27.94■■■□□ 2.06
TRIM39-210ENST00000440271 PCNTO95613 3336 aa27.94■■■□□ 2.06
TRIM39-210ENST00000440271 DIAPH1O60610 1272 aaKnown RBP27.93■■■□□ 2.06
TRIM39-210ENST00000440271 TBC1D9BQ66K14 1250 aa27.93■■■□□ 2.06
TRIM39-210ENST00000440271 ZNF622Q969S3 477 aaKnown RBP eCLIP27.93■■■□□ 2.06
TRIM39-210ENST00000440271 BRIP1Q9BX63 1249 aa27.92■■■□□ 2.06
TRIM39-210ENST00000440271 VIRMAQ69YN4 1812 aaKnown RBP27.92■■■□□ 2.06
TRIM39-210ENST00000440271 PDE6BP35913 854 aa27.91■■■□□ 2.06
TRIM39-210ENST00000440271 PDZRN3Q9UPQ7 1066 aa27.91■■■□□ 2.06
TRIM39-210ENST00000440271 CCDC88AQ3V6T2 1871 aa27.91■■■□□ 2.06
TRIM39-210ENST00000440271 C21orf2O43822 256 aa27.9■■■□□ 2.06
TRIM39-210ENST00000440271 HSPA1AP0DMV8 641 aaKnown RBP27.9■■■□□ 2.06
TRIM39-210ENST00000440271 HSPA1BP0DMV9 641 aaKnown RBP27.9■■■□□ 2.06
TRIM39-210ENST00000440271 ZNF496Q96IT1 587 aaPredicted RBP27.9■■■□□ 2.06
TRIM39-210ENST00000440271 ZNF219Q9P2Y4 722 aaPredicted RBP27.9■■■□□ 2.06
TRIM39-210ENST00000440271 TIAM2Q8IVF5 1701 aa27.89■■■□□ 2.06
TRIM39-210ENST00000440271 UBR2Q8IWV8 1755 aa27.89■■■□□ 2.06
TRIM39-210ENST00000440271 CCDC24Q8N4L8 307 aa27.89■■■□□ 2.06
TRIM39-210ENST00000440271 TBC1D2BQ9UPU7 963 aa27.89■■■□□ 2.06
TRIM39-210ENST00000440271 ERFEQ4G0M1 354 aa27.88■■■□□ 2.05
TRIM39-210ENST00000440271 PRR5LQ6MZQ0 368 aa27.88■■■□□ 2.05
TRIM39-210ENST00000440271 TEX13AQ9BXU3 409 aaPredicted RBP27.88■■■□□ 2.05
TRIM39-210ENST00000440271 ZNF790Q6PG37 636 aa27.87■■■□□ 2.05
TRIM39-210ENST00000440271 ZNF330Q9Y3S2 320 aaPredicted RBP27.87■■■□□ 2.05
TRIM39-210ENST00000440271 IL17REQ8NFR9 667 aa27.86■■■□□ 2.05
TRIM39-210ENST00000440271 HEG1Q9ULI3 1381 aa27.86■■■□□ 2.05
TRIM39-210ENST00000440271 TEFQ10587 303 aa27.85■■■□□ 2.05
TRIM39-210ENST00000440271 ANKRD31Q8N7Z5 1873 aa27.85■■■□□ 2.05
TRIM39-210ENST00000440271 IL6STP40189 918 aaPredicted RBP27.84■■■□□ 2.05
TRIM39-210ENST00000440271 GNAT3A8MTJ3 354 aa27.83■■■□□ 2.05
TRIM39-210ENST00000440271 PER1O15534 1290 aaPredicted RBP27.83■■■□□ 2.05
TRIM39-210ENST00000440271 CC2D1BQ5T0F9 858 aaKnown RBP27.83■■■□□ 2.05
TRIM39-210ENST00000440271 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
TRIM39-210ENST00000440271 SETDB2Q96T68 719 aa27.82■■■□□ 2.04
TRIM39-210ENST00000440271 TAOK3Q9H2K8 898 aa27.82■■■□□ 2.04
TRIM39-210ENST00000440271 LTBP3Q9NS15 1303 aa27.82■■■□□ 2.04
TRIM39-210ENST00000440271 A1BGP04217 495 aa27.81■■■□□ 2.04
TRIM39-210ENST00000440271 CHADLQ6NUI6 762 aa27.81■■■□□ 2.04
TRIM39-210ENST00000440271 CNKSR1Q969H4 720 aa27.81■■■□□ 2.04
TRIM39-210ENST00000440271 DDNO94850 711 aaPredicted RBP27.8■■■□□ 2.04
TRIM39-210ENST00000440271 NPM2Q86SE8 214 aaKnown RBP27.8■■■□□ 2.04
TRIM39-210ENST00000440271 CNBD1Q8NA66 436 aa27.8■■■□□ 2.04
TRIM39-210ENST00000440271 GAS2L2Q8NHY3 880 aa27.8■■■□□ 2.04
TRIM39-210ENST00000440271 FMNL2Q96PY5 1086 aa27.8■■■□□ 2.04
TRIM39-210ENST00000440271 FER1L6Q2WGJ9 1857 aa27.8■■■□□ 2.04
TRIM39-210ENST00000440271 U2SURPO15042 1029 aaKnown RBP27.79■■■□□ 2.04
TRIM39-210ENST00000440271 NPHP1O15259 732 aa27.79■■■□□ 2.04
TRIM39-210ENST00000440271 CAMTA2O94983 1202 aa27.79■■■□□ 2.04
TRIM39-210ENST00000440271 STYK1Q6J9G0 422 aa27.79■■■□□ 2.04
TRIM39-210ENST00000440271 CREBZFQ9NS37 354 aa27.79■■■□□ 2.04
TRIM39-210ENST00000440271 DICER1Q9UPY3 1922 aaKnown RBP27.79■■■□□ 2.04
TRIM39-210ENST00000440271 SCN7AQ01118 1682 aa27.78■■■□□ 2.04
TRIM39-210ENST00000440271 POTEIP0CG38 1075 aa27.78■■■□□ 2.04
TRIM39-210ENST00000440271 POTEJP0CG39 1038 aa27.78■■■□□ 2.04
TRIM39-210ENST00000440271 SRGNP10124 158 aa27.78■■■□□ 2.04
TRIM39-210ENST00000440271 COL11A2P13942 1736 aaPredicted RBP27.78■■■□□ 2.04
TRIM39-210ENST00000440271 ST5P78524 1137 aa27.77■■■□□ 2.04
TRIM39-210ENST00000440271 PRPF40BQ6NWY9 871 aaKnown RBP27.77■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms