RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
APP-209ENST00000440126 UNC5CLQ8IV45 518 aa9.73□□□□□ -0.85
APP-209ENST00000440126 SRCIN1Q9C0H9 1055 aa9.73□□□□□ -0.85
APP-209ENST00000440126 GZF1Q9H116 711 aaPredicted RBP9.73□□□□□ -0.85
APP-209ENST00000440126 MAP3K2Q9Y2U5 619 aa9.73□□□□□ -0.85
APP-209ENST00000440126 KIF24Q5T7B8 1368 aa9.73□□□□□ -0.85
APP-209ENST00000440126 MST1RQ04912 1400 aa9.73□□□□□ -0.85
APP-209ENST00000440126 SRGAP3O43295 1099 aa9.73□□□□□ -0.85
APP-209ENST00000440126 STRN4Q9NRL3 753 aa9.73□□□□□ -0.85
APP-209ENST00000440126 PA2G4Q9UQ80 394 aaKnown RBP9.73□□□□□ -0.85
APP-209ENST00000440126 LRRC37A3O60309 1634 aa9.72□□□□□ -0.85
APP-209ENST00000440126 MED1Q15648 1581 aaPredicted RBP9.72□□□□□ -0.85
APP-209ENST00000440126 HSP90AB1P08238 724 aaKnown RBP9.72□□□□□ -0.85
APP-209ENST00000440126 PDE1AP54750 535 aa9.72□□□□□ -0.85
APP-209ENST00000440126 DNAAF4Q8WXU2 420 aa9.72□□□□□ -0.85
APP-209ENST00000440126 GIGYF1O75420 1035 aaPredicted RBP9.72□□□□□ -0.85
APP-209ENST00000440126 IPO4Q8TEX9 1081 aaKnown RBP9.72□□□□□ -0.85
APP-209ENST00000440126 SECISBP2LQ93073 1101 aaKnown RBP9.72□□□□□ -0.85
APP-209ENST00000440126 SOS1Q07889 1333 aaPredicted RBP9.72□□□□□ -0.85
APP-209ENST00000440126 DTNBO60941 627 aa9.71□□□□□ -0.85
APP-209ENST00000440126 GNAI3P08754 354 aa9.71□□□□□ -0.85
APP-209ENST00000440126 LRRCC1Q9C099 1032 aa9.71□□□□□ -0.85
APP-209ENST00000440126 ADCY9O60503 1353 aa9.71□□□□□ -0.86
APP-209ENST00000440126 MEGF6O75095 1541 aa9.71□□□□□ -0.86
APP-209ENST00000440126 ATP8B2P98198 1209 aa9.71□□□□□ -0.86
APP-209ENST00000440126 KLHDC4Q8TBB5 520 aa9.71□□□□□ -0.86
APP-209ENST00000440126 ZHX1Q9UKY1 873 aaPredicted RBP9.71□□□□□ -0.86
APP-209ENST00000440126 CYP27B1O15528 508 aa9.7□□□□□ -0.86
APP-209ENST00000440126 RBM25P49756 843 aaKnown RBP9.7□□□□□ -0.86
APP-209ENST00000440126 OS9Q13438 667 aaPredicted RBP9.7□□□□□ -0.86
APP-209ENST00000440126 AMOTQ4VCS5 1084 aa9.7□□□□□ -0.86
APP-209ENST00000440126 BEND3Q5T5X7 828 aa9.7□□□□□ -0.86
APP-209ENST00000440126 ZNF496Q96IT1 587 aaPredicted RBP9.7□□□□□ -0.86
APP-209ENST00000440126 AK9Q5TCS8 1911 aa9.7□□□□□ -0.86
APP-209ENST00000440126 TRPM3Q9HCF6 1732 aaPredicted RBP9.7□□□□□ -0.86
APP-209ENST00000440126 TATP17735 454 aaPredicted RBP9.7□□□□□ -0.86
APP-209ENST00000440126 BRINP3Q76B58 766 aa9.7□□□□□ -0.86
APP-209ENST00000440126 DDX54Q8TDD1 881 aaKnown RBP9.7□□□□□ -0.86
APP-209ENST00000440126 SIL1Q9H173 461 aa9.7□□□□□ -0.86
APP-209ENST00000440126 IL25Q9H293 177 aa9.7□□□□□ -0.86
APP-209ENST00000440126 PRDM11Q9NQV5 511 aa9.7□□□□□ -0.86
APP-209ENST00000440126 C9orf78Q9NZ63 289 aaPredicted RBP9.7□□□□□ -0.86
APP-209ENST00000440126 USP16Q9Y5T5 823 aa9.7□□□□□ -0.86
APP-209ENST00000440126 MX1P20591 662 aa9.69□□□□□ -0.86
APP-209ENST00000440126 CADPS2Q86UW7 1296 aa9.69□□□□□ -0.86
APP-209ENST00000440126 CCDC9Q9Y3X0 531 aaKnown RBP9.69□□□□□ -0.86
APP-209ENST00000440126 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.69□□□□□ -0.86
APP-209ENST00000440126 TOM1L2Q6ZVM7 507 aa9.69□□□□□ -0.86
APP-209ENST00000440126 ZNF330Q9Y3S2 320 aaPredicted RBP9.69□□□□□ -0.86
APP-209ENST00000440126 NPHP3Q7Z494 1330 aa9.69□□□□□ -0.86
APP-209ENST00000440126 SLIT3O75094 1523 aa9.69□□□□□ -0.86
APP-209ENST00000440126 PHKG2P15735 406 aa9.69□□□□□ -0.86
APP-209ENST00000440126 FOXD4L5Q5VV16 416 aaPredicted RBP9.69□□□□□ -0.86
APP-209ENST00000440126 ZNF790Q6PG37 636 aa9.69□□□□□ -0.86
APP-209ENST00000440126 FOXD4L4Q8WXT5 416 aaPredicted RBP9.69□□□□□ -0.86
APP-209ENST00000440126 CHAMP1Q96JM3 812 aa9.69□□□□□ -0.86
APP-209ENST00000440126 PDCL3Q9H2J4 239 aa9.69□□□□□ -0.86
APP-209ENST00000440126 DBF4Q9UBU7 674 aaPredicted RBP9.69□□□□□ -0.86
APP-209ENST00000440126 KDM6AO15550 1401 aaPredicted RBP9.68□□□□□ -0.86
APP-209ENST00000440126 USP54Q70EL1 1684 aa9.68□□□□□ -0.86
APP-209ENST00000440126 ATP5J2-PTCD1G3V325 749 aa9.68□□□□□ -0.86
APP-209ENST00000440126 PTCD1O75127 700 aaKnown RBP9.68□□□□□ -0.86
APP-209ENST00000440126 XAGE3Q8WTP9 111 aa9.68□□□□□ -0.86
APP-209ENST00000440126 KDM4FA0A1W2PPD8 638 aa9.68□□□□□ -0.86
APP-209ENST00000440126 MAPK8IP2Q13387 824 aaPredicted RBP9.68□□□□□ -0.86
APP-209ENST00000440126 RIC3Q7Z5B4 369 aa9.68□□□□□ -0.86
APP-209ENST00000440126 ZNF830Q96NB3 372 aaPredicted RBP9.68□□□□□ -0.86
APP-209ENST00000440126 USP26Q9BXU7 913 aa9.68□□□□□ -0.86
APP-209ENST00000440126 COPS6Q7L5N1 327 aa9.67□□□□□ -0.86
APP-209ENST00000440126 LARP6Q9BRS8 491 aaKnown RBP9.67□□□□□ -0.86
APP-209ENST00000440126 SLC52A2Q9HAB3 445 aa9.67□□□□□ -0.86
APP-209ENST00000440126 ANO2Q9NQ90 1003 aa9.67□□□□□ -0.86
APP-209ENST00000440126 IBTKQ9P2D0 1353 aaPredicted RBP9.67□□□□□ -0.86
APP-209ENST00000440126 A0A0G2JS52 829 aa9.67□□□□□ -0.86
APP-209ENST00000440126 SPATA31A3Q5VYP0 1347 aa9.67□□□□□ -0.86
APP-209ENST00000440126 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.67□□□□□ -0.86
APP-209ENST00000440126 RHPN1Q8TCX5 695 aa9.67□□□□□ -0.86
APP-209ENST00000440126 SUCLG2Q96I99 432 aa9.67□□□□□ -0.86
APP-209ENST00000440126 MYD88Q99836 296 aa9.67□□□□□ -0.86
APP-209ENST00000440126 PALD1Q9ULE6 856 aa9.67□□□□□ -0.86
APP-209ENST00000440126 PDIA6Q15084 440 aa9.66□□□□□ -0.86
APP-209ENST00000440126 PKP1Q13835 747 aa9.66□□□□□ -0.86
APP-209ENST00000440126 ARID3AQ99856 593 aa9.66□□□□□ -0.86
APP-209ENST00000440126 KDM3BQ7LBC6 1761 aa9.66□□□□□ -0.86
APP-209ENST00000440126 CLCN1P35523 988 aa9.65□□□□□ -0.86
APP-209ENST00000440126 CABP4P57796 275 aa9.65□□□□□ -0.86
APP-209ENST00000440126 LARP1Q6PKG0 1096 aaKnown RBP9.65□□□□□ -0.86
APP-209ENST00000440126 KSR2Q6VAB6 950 aa9.65□□□□□ -0.86
APP-209ENST00000440126 IFNL2Q8IZJ0 200 aa9.65□□□□□ -0.86
APP-209ENST00000440126 TTC5Q8N0Z6 440 aa9.65□□□□□ -0.86
APP-209ENST00000440126 SSH3Q8TE77 659 aa9.65□□□□□ -0.86
APP-209ENST00000440126 UPF3BQ9BZI7 483 aaKnown RBP9.65□□□□□ -0.86
APP-209ENST00000440126 BICC1Q9H694 974 aaKnown RBP9.65□□□□□ -0.86
APP-209ENST00000440126 SLAIN2Q9P270 581 aa9.65□□□□□ -0.86
APP-209ENST00000440126 SPG7Q9UQ90 795 aa9.65□□□□□ -0.86
APP-209ENST00000440126 LMO7Q8WWI1 1683 aa9.65□□□□□ -0.86
APP-209ENST00000440126 TNS3Q68CZ2 1445 aa9.65□□□□□ -0.86
APP-209ENST00000440126 IGKV5-2P06315 115 aa9.65□□□□□ -0.86
APP-209ENST00000440126 SSFA2P28290 1259 aa9.65□□□□□ -0.86
APP-209ENST00000440126 EPHA10Q5JZY3 1008 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms