RNA–Protein interactions for RNA: ENST00000440088.5

APTR-204, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best) BASIC

Gene APTR, Length 2,029 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-204ENST00000440088 PROSER3Q2NL68 480 aa24.78■■□□□ 1.56
APTR-204ENST00000440088 USP16Q9Y5T5 823 aa24.77■■□□□ 1.56
APTR-204ENST00000440088 ITGB4P16144 1822 aa24.77■■□□□ 1.56
APTR-204ENST00000440088 KCPQ6ZWJ8 1503 aa24.77■■□□□ 1.56
APTR-204ENST00000440088 N4BP2Q86UW6 1770 aaPredicted RBP24.77■■□□□ 1.56
APTR-204ENST00000440088 PDIA6Q15084 440 aa24.76■■□□□ 1.55
APTR-204ENST00000440088 MEX3CQ5U5Q3 659 aaKnown RBP24.76■■□□□ 1.55
APTR-204ENST00000440088 PIGBQ92521 554 aa24.76■■□□□ 1.55
APTR-204ENST00000440088 C1orf115Q9H7X2 142 aa24.76■■□□□ 1.55
APTR-204ENST00000440088 USP21Q9UK80 565 aa24.76■■□□□ 1.55
APTR-204ENST00000440088 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.76■■□□□ 1.55
APTR-204ENST00000440088 LAMB4A4D0S4 1761 aa24.76■■□□□ 1.55
APTR-204ENST00000440088 KAT6BQ8WYB5 2073 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 PI4KAP2A4QPH2 592 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 PI4KAP1Q8N8J0 262 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 MEIS3Q99687 375 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 PTCD1O75127 700 aaKnown RBP24.74■■□□□ 1.55
APTR-204ENST00000440088 DNAAF4Q8WXU2 420 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 TSHZ2Q9NRE2 1034 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 BCL9O00512 1426 aa24.74■■□□□ 1.55
APTR-204ENST00000440088 FAM98CQ17RN3 349 aaKnown RBP24.73■■□□□ 1.55
APTR-204ENST00000440088 DDX58O95786 925 aaKnown RBP24.72■■□□□ 1.55
APTR-204ENST00000440088 SKAP1Q86WV1 359 aa24.72■■□□□ 1.55
APTR-204ENST00000440088 ADCY9O60503 1353 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 KSR2Q6VAB6 950 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 ERBB4Q15303 1308 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 MYL6BP14649 208 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 MARCH10Q8NA82 808 aaPredicted RBP24.71■■□□□ 1.55
APTR-204ENST00000440088 SYTL4Q96C24 671 aaPredicted RBP24.71■■□□□ 1.55
APTR-204ENST00000440088 SRCIN1Q9C0H9 1055 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 ASAP1Q9ULH1 1129 aa24.71■■□□□ 1.55
APTR-204ENST00000440088 DOT1LQ8TEK3 1739 aa24.7■■□□□ 1.54
APTR-204ENST00000440088 GNAI3P08754 354 aa24.69■■□□□ 1.54
APTR-204ENST00000440088 SMC5Q8IY18 1101 aa24.69■■□□□ 1.54
APTR-204ENST00000440088 ATG3Q9NT62 314 aa24.69■■□□□ 1.54
APTR-204ENST00000440088 MAP3K2Q9Y2U5 619 aa24.69■■□□□ 1.54
APTR-204ENST00000440088 ATP10DQ9P241 1426 aa24.69■■□□□ 1.54
APTR-204ENST00000440088 PRIM1P49642 420 aaKnown RBP24.68■■□□□ 1.54
APTR-204ENST00000440088 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
APTR-204ENST00000440088 BEND3Q5T5X7 828 aa24.68■■□□□ 1.54
APTR-204ENST00000440088 RPAP2Q8IXW5 612 aaPredicted RBP24.68■■□□□ 1.54
APTR-204ENST00000440088 VSIG10Q8N0Z9 540 aa24.68■■□□□ 1.54
APTR-204ENST00000440088 SIRT2Q8IXJ6 389 aa24.68■■□□□ 1.54
APTR-204ENST00000440088 LRP10Q7Z4F1 713 aa24.67■■□□□ 1.54
APTR-204ENST00000440088 AFF2P51816 1311 aa24.67■■□□□ 1.54
APTR-204ENST00000440088 GNAI2P04899 355 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 ANKRD44Q8N8A2 993 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 XAGE3Q8WTP9 111 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 PDZRN3Q9UPQ7 1066 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 RGS3P49796 1198 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 COPS6Q7L5N1 327 aa24.66■■□□□ 1.54
APTR-204ENST00000440088 TEX13AQ9BXU3 409 aaPredicted RBP24.66■■□□□ 1.54
APTR-204ENST00000440088 CEP85Q6P2H3 762 aa24.65■■□□□ 1.54
APTR-204ENST00000440088 GCC1Q96CN9 775 aa24.65■■□□□ 1.54
APTR-204ENST00000440088 USP44Q9H0E7 712 aa24.65■■□□□ 1.54
APTR-204ENST00000440088 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
APTR-204ENST00000440088 A0A0G2JS52 829 aa24.64■■□□□ 1.53
APTR-204ENST00000440088 MYT1Q01538 1121 aa24.64■■□□□ 1.53
APTR-204ENST00000440088 RIC3Q7Z5B4 369 aa24.64■■□□□ 1.53
APTR-204ENST00000440088 RBM42Q9BTD8 480 aaKnown RBP24.64■■□□□ 1.53
APTR-204ENST00000440088 ALDH1L1O75891 902 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 UBTFL1P0CB47 393 aaPredicted RBP24.62■■□□□ 1.53
APTR-204ENST00000440088 NBPF26B4DH59 902 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 NBPF14Q5TI25 921 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 NBPF10Q6P3W6 841 aaKnown RBP24.62■■□□□ 1.53
APTR-204ENST00000440088 ANKRD13DQ6ZTN6 518 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 NBPF15Q8N660 670 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 ACSBG1Q96GR2 724 aa24.62■■□□□ 1.53
APTR-204ENST00000440088 GJD4Q96KN9 370 aaPredicted RBP24.62■■□□□ 1.53
APTR-204ENST00000440088 LINS1Q8NG48 757 aa24.61■■□□□ 1.53
APTR-204ENST00000440088 A1BGP04217 495 aa24.61■■□□□ 1.53
APTR-204ENST00000440088 THSD7AQ9UPZ6 1657 aa24.61■■□□□ 1.53
APTR-204ENST00000440088 HMMRO75330 724 aa24.6■■□□□ 1.53
APTR-204ENST00000440088 STARD3NLO95772 234 aa24.6■■□□□ 1.53
APTR-204ENST00000440088 TRPC5Q9UL62 973 aaPredicted RBP24.6■■□□□ 1.53
APTR-204ENST00000440088 NEXNQ0ZGT2 675 aa24.59■■□□□ 1.53
APTR-204ENST00000440088 DNAJC10Q8IXB1 793 aa24.59■■□□□ 1.53
APTR-204ENST00000440088 NUCB1Q02818 461 aa24.59■■□□□ 1.53
APTR-204ENST00000440088 ATRNO75882 1429 aa24.58■■□□□ 1.53
APTR-204ENST00000440088 METTL22Q9BUU2 404 aaPredicted RBP24.58■■□□□ 1.53
APTR-204ENST00000440088 LRRFIP2Q9Y608 721 aaKnown RBP24.58■■□□□ 1.53
APTR-204ENST00000440088 DCTPP1Q9H773 170 aa24.57■■□□□ 1.52
APTR-204ENST00000440088 CWF19L2Q2TBE0 894 aaKnown RBP24.57■■□□□ 1.52
APTR-204ENST00000440088 PLBD2Q8NHP8 589 aa24.57■■□□□ 1.52
APTR-204ENST00000440088 NBPF7P0C2Y1 421 aaPredicted RBP24.56■■□□□ 1.52
APTR-204ENST00000440088 C9orf78Q9NZ63 289 aaPredicted RBP24.56■■□□□ 1.52
APTR-204ENST00000440088 IBTKQ9P2D0 1353 aaPredicted RBP24.56■■□□□ 1.52
APTR-204ENST00000440088 SLC4A9Q96Q91 983 aa24.56■■□□□ 1.52
APTR-204ENST00000440088 CHD1LQ86WJ1 897 aa24.55■■□□□ 1.52
APTR-204ENST00000440088 HDAC5Q9UQL6 1122 aa24.55■■□□□ 1.52
APTR-204ENST00000440088 ARFGEF2Q9Y6D5 1785 aa24.54■■□□□ 1.52
APTR-204ENST00000440088 IGKV5-2P06315 115 aa24.54■■□□□ 1.52
APTR-204ENST00000440088 ATP8B2P98198 1209 aa24.54■■□□□ 1.52
APTR-204ENST00000440088 ANKRD45Q5TZF3 282 aa24.54■■□□□ 1.52
APTR-204ENST00000440088 MYD88Q99836 296 aa24.54■■□□□ 1.52
APTR-204ENST00000440088 ONECUT3O60422 494 aaPredicted RBP24.53■■□□□ 1.52
APTR-204ENST00000440088 NEURL1BA8MQ27 555 aa24.52■■□□□ 1.52
APTR-204ENST00000440088 GRM8O00222 908 aa24.52■■□□□ 1.52
APTR-204ENST00000440088 KCNQ2O43526 872 aa24.52■■□□□ 1.52
APTR-204ENST00000440088 CYP19A1P11511 503 aaPredicted RBP24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms