RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 PROSER3Q2NL68 480 aa14.63□□□□□ -0.07
SMAD3-202ENST00000439724 KSR2Q6VAB6 950 aa14.63□□□□□ -0.07
SMAD3-202ENST00000439724 ZCRB1Q8TBF4 217 aaKnown RBP14.63□□□□□ -0.07
SMAD3-202ENST00000439724 IBTKQ9P2D0 1353 aaPredicted RBP14.63□□□□□ -0.07
SMAD3-202ENST00000439724 PDIA6Q15084 440 aa14.62□□□□□ -0.07
SMAD3-202ENST00000439724 NKX1-1Q15270 411 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-202ENST00000439724 ZNF496Q96IT1 587 aaPredicted RBP14.62□□□□□ -0.07
SMAD3-202ENST00000439724 PNMA6EA0A0J9YXQ4 647 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 DDX58O95786 925 aaKnown RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 CABP4P57796 275 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 TTC22Q5TAA0 569 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 TTC5Q8N0Z6 440 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 COL16A1Q07092 1604 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 ERVV-2B6SEH9 535 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 SNRPA1P09661 255 aaKnown RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 GSPT1P15170 499 aaKnown RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 MFAP1P55081 439 aaKnown RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 SSH3Q8TE77 659 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 FMNL2Q96PY5 1086 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 DAXXQ9UER7 740 aaPredicted RBP14.61□□□□□ -0.07
SMAD3-202ENST00000439724 MAP3K2Q9Y2U5 619 aa14.61□□□□□ -0.07
SMAD3-202ENST00000439724 PLCH1Q4KWH8 1693 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 CDC45O75419 566 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 EVA1CP58658 441 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 POLA2Q14181 598 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 C22orf23Q9BZE7 217 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 STRN4Q9NRL3 753 aa14.6□□□□□ -0.07
SMAD3-202ENST00000439724 SMARCA5O60264 1052 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-202ENST00000439724 EIF5BO60841 1220 aaKnown RBP14.59□□□□□ -0.07
SMAD3-202ENST00000439724 C16orf71Q8IYS4 520 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-202ENST00000439724 OTUD7AQ8TE49 926 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-202ENST00000439724 OSBPL3Q9H4L5 887 aa14.59□□□□□ -0.07
SMAD3-202ENST00000439724 HDAC5Q9UQL6 1122 aa14.59□□□□□ -0.07
SMAD3-202ENST00000439724 TUBGCP6Q96RT7 1819 aa14.59□□□□□ -0.07
SMAD3-202ENST00000439724 TOGARAM1Q9Y4F4 1720 aa14.58□□□□□ -0.07
SMAD3-202ENST00000439724 NBPF7P0C2Y1 421 aaPredicted RBP14.58□□□□□ -0.08
SMAD3-202ENST00000439724 MTX1Q13505 466 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 BECN1Q14457 450 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 TBC1D9Q6ZT07 1266 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 LINS1Q8NG48 757 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 LRRCC1Q9C099 1032 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 EXOC6BQ9Y2D4 811 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 TNS2Q63HR2 1409 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 SALL3Q9BXA9 1300 aa14.58□□□□□ -0.08
SMAD3-202ENST00000439724 KCPQ6ZWJ8 1503 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 WNK3Q9BYP7 1800 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 APBB1O00213 710 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 RBM25P49756 843 aaKnown RBP14.57□□□□□ -0.08
SMAD3-202ENST00000439724 LRP10Q7Z4F1 713 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 DISP2A7MBM2 1401 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 UTYO14607 1347 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
SMAD3-202ENST00000439724 RAB11FIP3O75154 756 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 PPP1R42Q7Z4L9 355 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 ARFGEF2Q9Y6D5 1785 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 PDE1AP54750 535 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 BTG4Q9NY30 223 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 USP16Q9Y5T5 823 aa14.56□□□□□ -0.08
SMAD3-202ENST00000439724 PHLPP1O60346 1717 aa14.55□□□□□ -0.08
SMAD3-202ENST00000439724 SLC4A3P48751 1232 aa14.55□□□□□ -0.08
SMAD3-202ENST00000439724 XAGE3Q8WTP9 111 aa14.55□□□□□ -0.08
SMAD3-202ENST00000439724 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
SMAD3-202ENST00000439724 AOX1Q06278 1338 aa14.55□□□□□ -0.08
SMAD3-202ENST00000439724 LRP6O75581 1613 aa14.54□□□□□ -0.08
SMAD3-202ENST00000439724 GRM8O00222 908 aa14.54□□□□□ -0.08
SMAD3-202ENST00000439724 SRGAP3O43295 1099 aa14.54□□□□□ -0.08
SMAD3-202ENST00000439724 MYL6BP14649 208 aa14.54□□□□□ -0.08
SMAD3-202ENST00000439724 AIMP1Q12904 312 aaKnown RBP14.54□□□□□ -0.08
SMAD3-202ENST00000439724 RIC3Q7Z5B4 369 aa14.54□□□□□ -0.08
SMAD3-202ENST00000439724 METTL22Q9BUU2 404 aaPredicted RBP14.54□□□□□ -0.08
SMAD3-202ENST00000439724 SDSP20132 328 aa14.53□□□□□ -0.08
SMAD3-202ENST00000439724 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
SMAD3-202ENST00000439724 CWF19L2Q2TBE0 894 aaKnown RBP14.53□□□□□ -0.08
SMAD3-202ENST00000439724 HSP90AB4PQ58FF6 505 aa14.53□□□□□ -0.08
SMAD3-202ENST00000439724 COPS6Q7L5N1 327 aa14.53□□□□□ -0.08
SMAD3-202ENST00000439724 STAP2Q9UGK3 403 aa14.53□□□□□ -0.08
SMAD3-202ENST00000439724 AFDNP55196 1824 aaKnown RBP14.53□□□□□ -0.08
SMAD3-202ENST00000439724 SURF6O75683 361 aaKnown RBP14.52□□□□□ -0.08
SMAD3-202ENST00000439724 IGKV5-2P06315 115 aa14.52□□□□□ -0.08
SMAD3-202ENST00000439724 MX1P20591 662 aa14.52□□□□□ -0.08
SMAD3-202ENST00000439724 DDX54Q8TDD1 881 aaKnown RBP14.52□□□□□ -0.08
SMAD3-202ENST00000439724 NRAPQ86VF7 1730 aa14.52□□□□□ -0.08
SMAD3-202ENST00000439724 NUP188Q5SRE5 1749 aa14.52□□□□□ -0.09
SMAD3-202ENST00000439724 ITGB4P16144 1822 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 NEURL1BA8MQ27 555 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 ANKRD13DQ6ZTN6 518 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 KIF1BPQ96EK5 621 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 CASC1Q6TDU7 716 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 RHPN1Q8TCX5 695 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 TBC1D2Q9BYX2 928 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 COL15A1P39059 1388 aa14.51□□□□□ -0.09
SMAD3-202ENST00000439724 GCKRQ14397 625 aa14.5□□□□□ -0.09
SMAD3-202ENST00000439724 PLBD2Q8NHP8 589 aa14.5□□□□□ -0.09
SMAD3-202ENST00000439724 BCL11AQ9H165 835 aa14.5□□□□□ -0.09
SMAD3-202ENST00000439724 MYT1Q01538 1121 aa14.49□□□□□ -0.09
SMAD3-202ENST00000439724 KAZALD1Q96I82 304 aa14.49□□□□□ -0.09
SMAD3-202ENST00000439724 SUCLG2Q96I99 432 aa14.49□□□□□ -0.09
SMAD3-202ENST00000439724 MYD88Q99836 296 aa14.49□□□□□ -0.09
SMAD3-202ENST00000439724 TMOD3Q9NYL9 352 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms