RNA–Protein interactions for RNA: ENST00000437813.7

TNFRSF1A-203, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 634 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-203ENST00000437813 GNAT3A8MTJ3 354 aa19.41■□□□□ 0.7
TNFRSF1A-203ENST00000437813 PPP2R1AP30153 589 aa19.41■□□□□ 0.7
TNFRSF1A-203ENST00000437813 GAS2L2Q8NHY3 880 aa19.41■□□□□ 0.7
TNFRSF1A-203ENST00000437813 ZNF496Q96IT1 587 aaPredicted RBP19.41■□□□□ 0.7
TNFRSF1A-203ENST00000437813 NARFQ9UHQ1 456 aa19.41■□□□□ 0.7
TNFRSF1A-203ENST00000437813 USPL1Q5W0Q7 1092 aa19.4■□□□□ 0.7
TNFRSF1A-203ENST00000437813 EIF5P55010 431 aaKnown RBP19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 ZNF790Q6PG37 636 aa19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 BCS1LQ9Y276 419 aa19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 HEG1Q9ULI3 1381 aa19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 DLEC1Q9Y238 1755 aa19.39■□□□□ 0.69
TNFRSF1A-203ENST00000437813 PRKAR2BP31323 418 aa19.38■□□□□ 0.69
TNFRSF1A-203ENST00000437813 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
TNFRSF1A-203ENST00000437813 NFIXQ14938 502 aa19.38■□□□□ 0.69
TNFRSF1A-203ENST00000437813 SENP3-EIF4A1A0A087X0R7 540 aa19.37■□□□□ 0.69
TNFRSF1A-203ENST00000437813 GPBP1L1Q9HC44 474 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-203ENST00000437813 ZPR1O75312 459 aa19.36■□□□□ 0.69
TNFRSF1A-203ENST00000437813 KIF3CO14782 793 aa19.35■□□□□ 0.69
TNFRSF1A-203ENST00000437813 TEFQ10587 303 aa19.35■□□□□ 0.69
TNFRSF1A-203ENST00000437813 CFAP53Q96M91 514 aa19.35■□□□□ 0.69
TNFRSF1A-203ENST00000437813 PIM2Q9P1W9 311 aa19.35■□□□□ 0.69
TNFRSF1A-203ENST00000437813 SBF1O95248 1867 aa19.35■□□□□ 0.69
TNFRSF1A-203ENST00000437813 KCNQ3O43525 872 aa19.34■□□□□ 0.69
TNFRSF1A-203ENST00000437813 FCHSD2O94868 740 aa19.34■□□□□ 0.69
TNFRSF1A-203ENST00000437813 CHRNA5P30532 468 aa19.34■□□□□ 0.69
TNFRSF1A-203ENST00000437813 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
TNFRSF1A-203ENST00000437813 ANKRD31Q8N7Z5 1873 aa19.34■□□□□ 0.69
TNFRSF1A-203ENST00000437813 STARD3NLO95772 234 aa19.33■□□□□ 0.68
TNFRSF1A-203ENST00000437813 CARMIL3Q8ND23 1372 aa19.32■□□□□ 0.68
TNFRSF1A-203ENST00000437813 BCORQ6W2J9 1755 aa19.32■□□□□ 0.68
TNFRSF1A-203ENST00000437813 CANXP27824 592 aaKnown RBP19.32■□□□□ 0.68
TNFRSF1A-203ENST00000437813 ZNF526Q8TF50 670 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-203ENST00000437813 TEX13AQ9BXU3 409 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-203ENST00000437813 DALRD3Q5D0E6 543 aaKnown RBP19.31■□□□□ 0.68
TNFRSF1A-203ENST00000437813 ARHGAP27Q6ZUM4 889 aa19.31■□□□□ 0.68
TNFRSF1A-203ENST00000437813 FMNL2Q96PY5 1086 aa19.31■□□□□ 0.68
TNFRSF1A-203ENST00000437813 NUDCQ9Y266 331 aa19.31■□□□□ 0.68
TNFRSF1A-203ENST00000437813 SERPINB2P05120 415 aa19.3■□□□□ 0.68
TNFRSF1A-203ENST00000437813 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-203ENST00000437813 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
TNFRSF1A-203ENST00000437813 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
TNFRSF1A-203ENST00000437813 DLG5Q8TDM6 1919 aa19.29■□□□□ 0.68
TNFRSF1A-203ENST00000437813 BTBD11A6QL63 1104 aa19.28■□□□□ 0.68
TNFRSF1A-203ENST00000437813 A1BGP04217 495 aa19.28■□□□□ 0.68
TNFRSF1A-203ENST00000437813 TBC1D9BQ66K14 1250 aa19.28■□□□□ 0.68
TNFRSF1A-203ENST00000437813 MCM10Q7L590 875 aa19.28■□□□□ 0.68
TNFRSF1A-203ENST00000437813 COL11A2P13942 1736 aaPredicted RBP19.28■□□□□ 0.68
TNFRSF1A-203ENST00000437813 A0A087WZG4 1122 aa19.27■□□□□ 0.68
TNFRSF1A-203ENST00000437813 PRAMEF22A3QJZ6 481 aa19.27■□□□□ 0.68
TNFRSF1A-203ENST00000437813 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
TNFRSF1A-203ENST00000437813 CAMTA2O94983 1202 aa19.27■□□□□ 0.68
TNFRSF1A-203ENST00000437813 USP16Q9Y5T5 823 aa19.27■□□□□ 0.68
TNFRSF1A-203ENST00000437813 PRELPP51888 382 aa19.26■□□□□ 0.67
TNFRSF1A-203ENST00000437813 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
TNFRSF1A-203ENST00000437813 TBC1D2BQ9UPU7 963 aa19.26■□□□□ 0.67
TNFRSF1A-203ENST00000437813 KDM3BQ7LBC6 1761 aa19.25■□□□□ 0.67
TNFRSF1A-203ENST00000437813 DCTN1Q14203 1278 aa19.25■□□□□ 0.67
TNFRSF1A-203ENST00000437813 PLEKHF1Q96S99 279 aa19.25■□□□□ 0.67
TNFRSF1A-203ENST00000437813 HSPA6P17066 643 aa19.24■□□□□ 0.67
TNFRSF1A-203ENST00000437813 NMRK2Q9NPI5 230 aa19.24■□□□□ 0.67
TNFRSF1A-203ENST00000437813 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
TNFRSF1A-203ENST00000437813 LAMB4A4D0S4 1761 aa19.23■□□□□ 0.67
TNFRSF1A-203ENST00000437813 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
TNFRSF1A-203ENST00000437813 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-203ENST00000437813 BICDL1Q6ZP65 573 aa19.22■□□□□ 0.67
TNFRSF1A-203ENST00000437813 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
TNFRSF1A-203ENST00000437813 SNRPA1P09661 255 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-203ENST00000437813 PIP4K2AP48426 406 aaPredicted RBP19.21■□□□□ 0.67
TNFRSF1A-203ENST00000437813 FER1L6Q2WGJ9 1857 aa19.21■□□□□ 0.67
TNFRSF1A-203ENST00000437813 RTF1Q92541 710 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-203ENST00000437813 BRIP1Q9BX63 1249 aa19.21■□□□□ 0.67
TNFRSF1A-203ENST00000437813 CCDC88AQ3V6T2 1871 aa19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 ARFGEF2Q9Y6D5 1785 aa19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 C2CD5Q86YS7 1000 aa19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 TTLL6Q8N841 843 aa19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 TNRC6CQ9HCJ0 1690 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-203ENST00000437813 NFKBIEO00221 500 aa19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 RGL2O15211 777 aa19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 TOMM70O94826 608 aa19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 RASSF7Q02833 373 aa19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 TAF7Q15545 349 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 DZIP3Q86Y13 1208 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-203ENST00000437813 TIAM2Q8IVF5 1701 aa19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 H0YIN7 160 aa19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 CLEC4GQ6UXB4 293 aa19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 ZNF330Q9Y3S2 320 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 ZC3H4Q9UPT8 1303 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
TNFRSF1A-203ENST00000437813 CCDC24Q8N4L8 307 aa19.17■□□□□ 0.66
TNFRSF1A-203ENST00000437813 PDZRN3Q9UPQ7 1066 aa19.17■□□□□ 0.66
TNFRSF1A-203ENST00000437813 DICER1Q9UPY3 1922 aaKnown RBP19.17■□□□□ 0.66
TNFRSF1A-203ENST00000437813 SETDB2Q96T68 719 aa19.16■□□□□ 0.66
TNFRSF1A-203ENST00000437813 MIS18AQ9NYP9 233 aa19.16■□□□□ 0.66
TNFRSF1A-203ENST00000437813 LMNB1P20700 586 aa19.15■□□□□ 0.66
TNFRSF1A-203ENST00000437813 PDE6BP35913 854 aa19.15■□□□□ 0.66
TNFRSF1A-203ENST00000437813 NFE2L2Q16236 605 aa19.15■□□□□ 0.66
TNFRSF1A-203ENST00000437813 CNBD1Q8NA66 436 aa19.15■□□□□ 0.66
TNFRSF1A-203ENST00000437813 KLRG2A4D1S0 409 aaPredicted RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms