RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 LTV1Q96GA3 475 aaPredicted RBP8.12□□□□□ -1.11
SHQ1P1-201ENST00000437111 ANP32EQ9BTT0 268 aa8.12□□□□□ -1.11
SHQ1P1-201ENST00000437111 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
SHQ1P1-201ENST00000437111 BCS1LQ9Y276 419 aa8.12□□□□□ -1.11
SHQ1P1-201ENST00000437111 EDC4Q6P2E9 1401 aaKnown RBP8.12□□□□□ -1.11
SHQ1P1-201ENST00000437111 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 CT47B1P0C2W7 299 aaPredicted RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 CENPQQ7L2Z9 268 aaPredicted RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 WDR63Q8IWG1 891 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 AK7Q96M32 723 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 RTN4Q9NQC3 1192 aaKnown RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 PALLDQ8WX93 1383 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 COL3A1P02461 1466 aaPredicted RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 CD163L1Q9NR16 1453 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 MEGF6O75095 1541 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 FAM208AQ9UK61 1670 aaKnown RBP8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 C4BP0C0L5 1744 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 KIAA1551Q9HCM1 1747 aa8.11□□□□□ -1.11
SHQ1P1-201ENST00000437111 A0A0G2JLW4 131 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 HMGB2P26583 209 aaKnown RBP8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 KCPQ6ZWJ8 1503 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 RRAGCQ9HB90 399 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 UBR3Q6ZT12 1888 aa8.1□□□□□ -1.11
SHQ1P1-201ENST00000437111 PLEKHG2Q9H7P9 1386 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 SSFA2P28290 1259 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 MTHFSP49914 203 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 NUBP1P53384 320 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 TGFB2P61812 414 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 TRMT2AQ8IZ69 625 aaKnown RBP8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 SMC1BQ8NDV3 1235 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 CRBNQ96SW2 442 aa8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 N4BP2Q86UW6 1770 aaPredicted RBP8.09□□□□□ -1.11
SHQ1P1-201ENST00000437111 KDM2BQ8NHM5 1336 aa8.09□□□□□ -1.12
SHQ1P1-201ENST00000437111 FCHSD2O94868 740 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 MMP10P09238 476 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 U2AF1L5P0DN76 240 aaPredicted RBP8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 TNNT2P45379 298 aaPredicted RBP8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 U2AF1Q01081 240 aaKnown RBP eCLIP8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 PDE3AQ14432 1141 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 PCDH10Q9P2E7 1040 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 KIF13BQ9NQT8 1826 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 DLG5Q8TDM6 1919 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 DPEP1P16444 411 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 MPRIPQ6WCQ1 1025 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 WWC1Q8IX03 1113 aa8.08□□□□□ -1.12
SHQ1P1-201ENST00000437111 RGPD2P0DJD1 1756 aa8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 HOXC9P31274 260 aa8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 CALD1Q05682 793 aaKnown RBP8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 RASEFQ8IZ41 740 aa8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 LINC00116Q8NCU8 138 aa8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 SMARCC1Q92922 1105 aaPredicted RBP8.07□□□□□ -1.12
SHQ1P1-201ENST00000437111 PKD1L3Q7Z443 1732 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 IL16Q14005 1332 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 MAP3K19Q56UN5 1328 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 HAX1O00165 279 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 DIAPH1O60610 1272 aaKnown RBP8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 KCNA3P22001 575 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 NBPF6Q5VWK0 638 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 USHBP1Q8N6Y0 703 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 NBPF4Q96M43 638 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
SHQ1P1-201ENST00000437111 C19orf67A6NJJ6 358 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 U2SURPO15042 1029 aaKnown RBP8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 PLIN1O60240 522 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 FBLN1P23142 703 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 DDRGK1Q96HY6 314 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 GGNBP2Q9H3C7 697 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 TNRC6CQ9HCJ0 1690 aaKnown RBP8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 PCDH11XQ9BZA7 1347 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 PCDH11YQ9BZA8 1340 aa8.05□□□□□ -1.12
SHQ1P1-201ENST00000437111 BRCA1P38398 1863 aaKnown RBP8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 LOC102724428A0A0B4J2F2 783 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 GNPATO15228 680 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 AMPHP49418 695 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 SIK1P57059 783 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 LMOD3Q0VAK6 560 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 ITPK1Q13572 414 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 RAPGEF4Q8WZA2 1011 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 PIGBQ92521 554 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 DCAF5Q96JK2 942 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 NOP58Q9Y2X3 529 aaKnown RBP8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 KIF16BQ96L93 1317 aa8.04□□□□□ -1.12
SHQ1P1-201ENST00000437111 FYB1O15117 783 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 FOXN1O15353 648 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 CYP27B1O15528 508 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 TATP17735 454 aaPredicted RBP8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 FAM161AQ3B820 660 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 ZNF428Q96B54 188 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 CCDC87Q9NVE4 849 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 CIZ1Q9ULV3 898 aaPredicted RBP8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 ARFGEF1Q9Y6D6 1849 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 NEUROD2Q15784 382 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 DCAF8Q5TAQ9 597 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 NLGN1Q8N2Q7 840 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 COG3Q96JB2 828 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 CHMP4BQ9H444 224 aaKnown RBP8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 PRDM10Q9NQV6 1147 aa8.03□□□□□ -1.12
SHQ1P1-201ENST00000437111 PIM2Q9P1W9 311 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms