RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 SOS1Q07889 1333 aaPredicted RBP20.27■□□□□ 0.84
HDAC8-213ENST00000436675 PRELPP51888 382 aa20.27■□□□□ 0.84
HDAC8-213ENST00000436675 NFIXQ14938 502 aa20.27■□□□□ 0.84
HDAC8-213ENST00000436675 TNS4Q8IZW8 715 aa20.27■□□□□ 0.84
HDAC8-213ENST00000436675 LGR6Q9HBX8 967 aa20.27■□□□□ 0.84
HDAC8-213ENST00000436675 CYP19A1P11511 503 aaPredicted RBP20.25■□□□□ 0.83
HDAC8-213ENST00000436675 LMNB1P20700 586 aa20.25■□□□□ 0.83
HDAC8-213ENST00000436675 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
HDAC8-213ENST00000436675 SERPINB2P05120 415 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 IL13P35225 146 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 AKAP4Q5JQC9 854 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 C2CD5Q86YS7 1000 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 NARFQ9UHQ1 456 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 ZBTB1Q9Y2K1 713 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 TIAM2Q8IVF5 1701 aa20.24■□□□□ 0.83
HDAC8-213ENST00000436675 DLEC1Q9Y238 1755 aa20.23■□□□□ 0.83
HDAC8-213ENST00000436675 COL15A1P39059 1388 aa20.23■□□□□ 0.83
HDAC8-213ENST00000436675 GLTPD2A6NH11 291 aa20.23■□□□□ 0.83
HDAC8-213ENST00000436675 VEGFAP15692 232 aaPredicted RBP20.23■□□□□ 0.83
HDAC8-213ENST00000436675 BICDL1Q6ZP65 573 aa20.23■□□□□ 0.83
HDAC8-213ENST00000436675 NRXN2Q9P2S2 1712 aa20.22■□□□□ 0.83
HDAC8-213ENST00000436675 HSPA5P11021 654 aaKnown RBP20.22■□□□□ 0.83
HDAC8-213ENST00000436675 TTLL6Q8N841 843 aa20.22■□□□□ 0.83
HDAC8-213ENST00000436675 BCL2L12Q9HB09 334 aa20.22■□□□□ 0.83
HDAC8-213ENST00000436675 ZNF219Q9P2Y4 722 aaPredicted RBP20.22■□□□□ 0.83
HDAC8-213ENST00000436675 RNMTO43148 476 aaKnown RBP20.21■□□□□ 0.83
HDAC8-213ENST00000436675 HMOX1P09601 288 aa20.21■□□□□ 0.83
HDAC8-213ENST00000436675 CARMIL3Q8ND23 1372 aa20.21■□□□□ 0.83
HDAC8-213ENST00000436675 HSPA1AP0DMV8 641 aaKnown RBP20.2■□□□□ 0.82
HDAC8-213ENST00000436675 HSPA1BP0DMV9 641 aaKnown RBP20.2■□□□□ 0.82
HDAC8-213ENST00000436675 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
HDAC8-213ENST00000436675 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
HDAC8-213ENST00000436675 H0YIN7 160 aa20.19■□□□□ 0.82
HDAC8-213ENST00000436675 NFKBIEO00221 500 aa20.19■□□□□ 0.82
HDAC8-213ENST00000436675 EIF4G2P78344 907 aaKnown RBP eCLIP20.18■□□□□ 0.82
HDAC8-213ENST00000436675 TRIM26Q12899 539 aaPredicted RBP20.18■□□□□ 0.82
HDAC8-213ENST00000436675 CCDC24Q8N4L8 307 aa20.18■□□□□ 0.82
HDAC8-213ENST00000436675 TIMELESSQ9UNS1 1208 aa20.18■□□□□ 0.82
HDAC8-213ENST00000436675 ZNF622Q969S3 477 aaKnown RBP eCLIP20.17■□□□□ 0.82
HDAC8-213ENST00000436675 KNSTRNQ9Y448 316 aa20.17■□□□□ 0.82
HDAC8-213ENST00000436675 ANKRD31Q8N7Z5 1873 aa20.17■□□□□ 0.82
HDAC8-213ENST00000436675 POTECB2RU33 542 aa20.16■□□□□ 0.82
HDAC8-213ENST00000436675 MRC1P22897 1456 aa20.16■□□□□ 0.82
HDAC8-213ENST00000436675 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
HDAC8-213ENST00000436675 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
HDAC8-213ENST00000436675 DICER1Q9UPY3 1922 aaKnown RBP20.14■□□□□ 0.81
HDAC8-213ENST00000436675 CACNA1SQ13698 1873 aa20.14■□□□□ 0.81
HDAC8-213ENST00000436675 C21orf2O43822 256 aa20.14■□□□□ 0.81
HDAC8-213ENST00000436675 PCGF6Q9BYE7 350 aa20.14■□□□□ 0.81
HDAC8-213ENST00000436675 TBC1D9BQ66K14 1250 aa20.13■□□□□ 0.81
HDAC8-213ENST00000436675 DPY19L2Q6NUT2 758 aa20.13■□□□□ 0.81
HDAC8-213ENST00000436675 UBR2Q8IWV8 1755 aa20.13■□□□□ 0.81
HDAC8-213ENST00000436675 FER1L6Q2WGJ9 1857 aa20.12■□□□□ 0.81
HDAC8-213ENST00000436675 ERFEQ4G0M1 354 aa20.12■□□□□ 0.81
HDAC8-213ENST00000436675 COL11A2P13942 1736 aaPredicted RBP20.12■□□□□ 0.81
HDAC8-213ENST00000436675 STARD3NLO95772 234 aa20.11■□□□□ 0.81
HDAC8-213ENST00000436675 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
HDAC8-213ENST00000436675 TTC5Q8N0Z6 440 aa20.11■□□□□ 0.81
HDAC8-213ENST00000436675 VSIG10Q8N0Z9 540 aa20.11■□□□□ 0.81
HDAC8-213ENST00000436675 MKRN1Q9UHC7 482 aaKnown RBP20.11■□□□□ 0.81
HDAC8-213ENST00000436675 TBC1D2BQ9UPU7 963 aa20.11■□□□□ 0.81
HDAC8-213ENST00000436675 A0A087WZG4 1122 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 POTEIP0CG38 1075 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 POTEJP0CG39 1038 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 PDE6BP35913 854 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 PRR5LQ6MZQ0 368 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 SLX4Q8IY92 1834 aa20.09■□□□□ 0.81
HDAC8-213ENST00000436675 DDNO94850 711 aaPredicted RBP20.08■□□□□ 0.81
HDAC8-213ENST00000436675 AMER1Q5JTC6 1135 aaPredicted RBP20.08■□□□□ 0.81
HDAC8-213ENST00000436675 ZNF496Q96IT1 587 aaPredicted RBP20.08■□□□□ 0.81
HDAC8-213ENST00000436675 BRIP1Q9BX63 1249 aa20.08■□□□□ 0.81
HDAC8-213ENST00000436675 SCN7AQ01118 1682 aa20.07■□□□□ 0.8
HDAC8-213ENST00000436675 NPHP1O15259 732 aa20.07■□□□□ 0.8
HDAC8-213ENST00000436675 CHADLQ6NUI6 762 aa20.07■□□□□ 0.8
HDAC8-213ENST00000436675 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
HDAC8-213ENST00000436675 TAOK3Q9H2K8 898 aa20.06■□□□□ 0.8
HDAC8-213ENST00000436675 CNGB1Q14028 1251 aaPredicted RBP20.05■□□□□ 0.8
HDAC8-213ENST00000436675 A1BGP04217 495 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 TEFQ10587 303 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 CNBD1Q8NA66 436 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 CREBZFQ9NS37 354 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 PDZRN3Q9UPQ7 1066 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 HEG1Q9ULI3 1381 aa20.04■□□□□ 0.8
HDAC8-213ENST00000436675 CC2D1BQ5T0F9 858 aaKnown RBP20.03■□□□□ 0.8
HDAC8-213ENST00000436675 ZNF790Q6PG37 636 aa20.03■□□□□ 0.8
HDAC8-213ENST00000436675 IL17REQ8NFR9 667 aa20.03■□□□□ 0.8
HDAC8-213ENST00000436675 SETDB2Q96T68 719 aa20.03■□□□□ 0.8
HDAC8-213ENST00000436675 PRPF40BQ6NWY9 871 aaKnown RBP20.02■□□□□ 0.8
HDAC8-213ENST00000436675 NPM2Q86SE8 214 aaKnown RBP20.02■□□□□ 0.8
HDAC8-213ENST00000436675 CNKSR1Q969H4 720 aa20.02■□□□□ 0.8
HDAC8-213ENST00000436675 LTBP3Q9NS15 1303 aa20.02■□□□□ 0.79
HDAC8-213ENST00000436675 SIPA1L3O60292 1781 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-213ENST00000436675 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
HDAC8-213ENST00000436675 IL6STP40189 918 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-213ENST00000436675 PIP4K2AP48426 406 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-213ENST00000436675 ST5P78524 1137 aa20.01■□□□□ 0.79
HDAC8-213ENST00000436675 TEX13AQ9BXU3 409 aaPredicted RBP20.01■□□□□ 0.79
HDAC8-213ENST00000436675 CLSPNQ9HAW4 1339 aa20.01■□□□□ 0.79
HDAC8-213ENST00000436675 GNAT3A8MTJ3 354 aa20■□□□□ 0.79
HDAC8-213ENST00000436675 FOXN1O15353 648 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms