RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 SURF6O75683 361 aaKnown RBP12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 UPF3BQ9BZI7 483 aaKnown RBP12.7□□□□□ -0.38
CLSTN1-203ENST00000435891 SRCIN1Q9C0H9 1055 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 RGPD2P0DJD1 1756 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 CACNA1FO60840 1977 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 NCLP19338 710 aaKnown RBP12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 BABAM1Q9NWV8 329 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 NFAT5O94916 1531 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 SRGAP3O43295 1099 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 PSME1Q06323 249 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 CAVIN1Q6NZI2 390 aaKnown RBP12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 ISY1Q9ULR0 285 aaKnown RBP12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 USP54Q70EL1 1684 aa12.69□□□□□ -0.38
CLSTN1-203ENST00000435891 PRPF40AO75400 957 aaKnown RBP12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 CWC22Q9HCG8 908 aaKnown RBP12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 PRAMEF22A3QJZ6 481 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 POLA2Q14181 598 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 BEND3Q5T5X7 828 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 PXDNLA1KZ92 1463 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 PTMSP20962 102 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 PI4K2BQ8TCG2 481 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 RHPN1Q8TCX5 695 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 GPT2Q8TD30 523 aa12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 RBM27Q9P2N5 1060 aaKnown RBP12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 NSFL1CQ9UNZ2 370 aaKnown RBP12.68□□□□□ -0.38
CLSTN1-203ENST00000435891 ZNF530Q6P9A1 599 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 ORAI2Q96SN7 254 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 PROSER3Q2NL68 480 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 DNAAF4Q8WXU2 420 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 PDCL3Q9H2J4 239 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 ZHX1Q9UKY1 873 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 PXDNQ92626 1479 aa12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 MED1Q15648 1581 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 N4BP2Q86UW6 1770 aaPredicted RBP12.67□□□□□ -0.38
CLSTN1-203ENST00000435891 ADCY9O60503 1353 aa12.66□□□□□ -0.38
CLSTN1-203ENST00000435891 BCL11BQ9C0K0 894 aaPredicted RBP12.66□□□□□ -0.38
CLSTN1-203ENST00000435891 ESPNB1AK53 854 aa12.66□□□□□ -0.38
CLSTN1-203ENST00000435891 TEFQ10587 303 aa12.66□□□□□ -0.38
CLSTN1-203ENST00000435891 ZSCAN23Q3MJ62 389 aa12.66□□□□□ -0.38
CLSTN1-203ENST00000435891 LMOD2Q6P5Q4 547 aa12.65□□□□□ -0.38
CLSTN1-203ENST00000435891 ANKLE2Q86XL3 938 aa12.65□□□□□ -0.38
CLSTN1-203ENST00000435891 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.38
CLSTN1-203ENST00000435891 AXIN2Q9Y2T1 843 aa12.65□□□□□ -0.38
CLSTN1-203ENST00000435891 GCP02774 474 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 CUL4AQ13619 759 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 FOXD4L6Q3SYB3 417 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 FOXD4L3Q6VB84 417 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 PRDM10Q9NQV6 1147 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 NASPP49321 788 aaPredicted RBP12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 AKAP4Q5JQC9 854 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 KIAA1211Q6ZU35 1233 aa12.64□□□□□ -0.39
CLSTN1-203ENST00000435891 DTNBO60941 627 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 MCCP23508 829 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 CWF19L2Q2TBE0 894 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 PA2G4Q9UQ80 394 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 RNMTO43148 476 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 RAB11FIP3O75154 756 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 ANAPC15P60006 121 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 KIF1BPQ96EK5 621 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 BRD1O95696 1058 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 HSPA4P34932 840 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 PRIM1P49642 420 aaKnown RBP12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 ZNF445P59923 1031 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 ARHGEF25Q86VW2 580 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 RASEFQ8IZ41 740 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 MAP3K2Q9Y2U5 619 aa12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.63□□□□□ -0.39
CLSTN1-203ENST00000435891 AOX1Q06278 1338 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 KCNH5Q8NCM2 988 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 RBSNQ9H1K0 784 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 SGSM2O43147 1006 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 HOXB7P09629 217 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 SPG7Q9UQ90 795 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 ADGRL3Q9HAR2 1447 aa12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 GIGYF1O75420 1035 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
CLSTN1-203ENST00000435891 TPM2P07951 284 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 ANKRD24Q8TF21 1146 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 CPA1P15085 419 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 GDPD2Q9HCC8 539 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 MCM2P49736 904 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 IL17RAQ96F46 866 aa12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 LSG1Q9H089 658 aaKnown RBP12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 DBF4Q9UBU7 674 aaPredicted RBP12.61□□□□□ -0.39
CLSTN1-203ENST00000435891 SNX14Q9Y5W7 946 aa12.6□□□□□ -0.39
CLSTN1-203ENST00000435891 RAD50Q92878 1312 aa12.6□□□□□ -0.39
CLSTN1-203ENST00000435891 LMO7Q8WWI1 1683 aa12.6□□□□□ -0.39
CLSTN1-203ENST00000435891 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
CLSTN1-203ENST00000435891 C1orf141Q5JVX7 400 aa12.6□□□□□ -0.39
CLSTN1-203ENST00000435891 SYCE3A1L190 88 aa12.59□□□□□ -0.39
CLSTN1-203ENST00000435891 KAZALD1Q96I82 304 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms