RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 SPG7Q9UQ90 795 aa26.1■■□□□ 1.77
TOP2B-204ENST00000435706 PTPN23Q9H3S7 1636 aa26.1■■□□□ 1.77
TOP2B-204ENST00000435706 HMGB1P09429 215 aaKnown RBP26.1■■□□□ 1.77
TOP2B-204ENST00000435706 IKQ13123 557 aaPredicted RBP26.1■■□□□ 1.77
TOP2B-204ENST00000435706 CPLX3Q8WVH0 158 aa26.1■■□□□ 1.77
TOP2B-204ENST00000435706 BIN1O00499 593 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 F6X3S4 739 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 USP48Q86UV5 1035 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 RPGRIP1LQ68CZ1 1315 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 FAM177BA6PVY3 158 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 SMC5Q8IY18 1101 aa26.09■■□□□ 1.77
TOP2B-204ENST00000435706 GNL3LQ9NVN8 582 aaKnown RBP26.08■■□□□ 1.77
TOP2B-204ENST00000435706 FAM200AQ8TCP9 573 aa26.08■■□□□ 1.77
TOP2B-204ENST00000435706 ANKRD62A6NC57 917 aa26.08■■□□□ 1.77
TOP2B-204ENST00000435706 BBXQ8WY36 941 aaPredicted RBP26.08■■□□□ 1.77
TOP2B-204ENST00000435706 BTBD11A6QL63 1104 aa26.08■■□□□ 1.76
TOP2B-204ENST00000435706 TDO2P48775 406 aa26.08■■□□□ 1.76
TOP2B-204ENST00000435706 CNNM3Q8NE01 707 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 CNPY2Q9Y2B0 182 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 SOGA3Q5TF21 947 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 CTR9Q6PD62 1173 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 GNG11P61952 73 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 GRIN2BQ13224 1484 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 SKILP12757 684 aa26.07■■□□□ 1.76
TOP2B-204ENST00000435706 NUP88Q99567 741 aaPredicted RBP26.07■■□□□ 1.76
TOP2B-204ENST00000435706 IPO4Q8TEX9 1081 aaKnown RBP26.06■■□□□ 1.76
TOP2B-204ENST00000435706 ANKRD18AQ8IVF6 992 aa26.06■■□□□ 1.76
TOP2B-204ENST00000435706 GNAT3A8MTJ3 354 aa26.06■■□□□ 1.76
TOP2B-204ENST00000435706 BMP2KQ9NSY1 1161 aaPredicted RBP26.06■■□□□ 1.76
TOP2B-204ENST00000435706 SEPT11Q9NVA2 429 aaKnown RBP26.05■■□□□ 1.76
TOP2B-204ENST00000435706 PTPRCP08575 1304 aa26.05■■□□□ 1.76
TOP2B-204ENST00000435706 ANO6Q4KMQ2 910 aa26.05■■□□□ 1.76
TOP2B-204ENST00000435706 YEATS4O95619 227 aa26.05■■□□□ 1.76
TOP2B-204ENST00000435706 PAFAH1B1P43034 410 aa26.04■■□□□ 1.76
TOP2B-204ENST00000435706 MAP2K1Q02750 393 aaPredicted RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 CCDC12Q8WUD4 166 aaPredicted RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 ZFP91Q96JP5 570 aaPredicted RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 CCDC141Q6ZP82 1450 aa26.04■■□□□ 1.76
TOP2B-204ENST00000435706 EPRSP07814 1512 aaKnown RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 MAPKBP1O60336 1514 aa26.04■■□□□ 1.76
TOP2B-204ENST00000435706 TATP17735 454 aaPredicted RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 SDSP20132 328 aa26.04■■□□□ 1.76
TOP2B-204ENST00000435706 LUZP1Q86V48 1076 aa26.04■■□□□ 1.76
TOP2B-204ENST00000435706 SMAP1Q8IYB5 467 aaPredicted RBP26.04■■□□□ 1.76
TOP2B-204ENST00000435706 CDK13Q14004 1512 aaKnown RBP26.03■■□□□ 1.76
TOP2B-204ENST00000435706 SSBP05455 408 aaKnown RBP eCLIP26.03■■□□□ 1.76
TOP2B-204ENST00000435706 FKBP15Q5T1M5 1219 aa26.03■■□□□ 1.76
TOP2B-204ENST00000435706 DYDC1Q8WWB3 177 aa26.03■■□□□ 1.76
TOP2B-204ENST00000435706 RBM42Q9BTD8 480 aaKnown RBP26.03■■□□□ 1.76
TOP2B-204ENST00000435706 ZSWIM4Q9H7M6 989 aa26.03■■□□□ 1.76
TOP2B-204ENST00000435706 DISP3Q9P2K9 1392 aa26.03■■□□□ 1.76
TOP2B-204ENST00000435706 ABCC5O15440 1437 aa26.03■■□□□ 1.76
TOP2B-204ENST00000435706 SLC26A8Q96RN1 970 aa26.02■■□□□ 1.76
TOP2B-204ENST00000435706 USO1O60763 962 aaKnown RBP26.01■■□□□ 1.76
TOP2B-204ENST00000435706 CCT2P78371 535 aaKnown RBP26.01■■□□□ 1.76
TOP2B-204ENST00000435706 ARFGAP3Q9NP61 516 aa26.01■■□□□ 1.76
TOP2B-204ENST00000435706 TSHZ3Q63HK5 1081 aa26.01■■□□□ 1.75
TOP2B-204ENST00000435706 EVI5LQ96CN4 794 aa26.01■■□□□ 1.75
TOP2B-204ENST00000435706 SLU7O95391 586 aaKnown RBP26.01■■□□□ 1.75
TOP2B-204ENST00000435706 CCDC8Q9H0W5 538 aaPredicted RBP26.01■■□□□ 1.75
TOP2B-204ENST00000435706 RBM25P49756 843 aaKnown RBP26■■□□□ 1.75
TOP2B-204ENST00000435706 IL16Q14005 1332 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 IDH1O75874 414 aaKnown RBP26■■□□□ 1.75
TOP2B-204ENST00000435706 IVLP07476 585 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 GTF2A1P52655 376 aaPredicted RBP26■■□□□ 1.75
TOP2B-204ENST00000435706 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26■■□□□ 1.75
TOP2B-204ENST00000435706 TICAM2Q86XR7 235 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 AIDAQ96BJ3 306 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 CCDC113Q9H0I3 377 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 DNAI1Q9UI46 699 aa26■■□□□ 1.75
TOP2B-204ENST00000435706 SEC24BO95487 1268 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 MNAT1P51948 309 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 CABP4P57796 275 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 IFFO1Q0D2I5 559 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 SLC52A1Q9NWF4 448 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 DNAAF4Q8WXU2 420 aa25.99■■□□□ 1.75
TOP2B-204ENST00000435706 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.98■■□□□ 1.75
TOP2B-204ENST00000435706 V9GYY5 206 aaPredicted RBP25.98■■□□□ 1.75
TOP2B-204ENST00000435706 ECHDC1Q9NTX5 307 aa25.98■■□□□ 1.75
TOP2B-204ENST00000435706 PIBF1Q8WXW3 757 aa25.98■■□□□ 1.75
TOP2B-204ENST00000435706 ZSCAN16Q9H4T2 348 aaPredicted RBP25.98■■□□□ 1.75
TOP2B-204ENST00000435706 GBP2P32456 591 aaPredicted RBP25.97■■□□□ 1.75
TOP2B-204ENST00000435706 TAF7Q15545 349 aaPredicted RBP25.97■■□□□ 1.75
TOP2B-204ENST00000435706 CACNA2D4Q7Z3S7 1137 aa25.97■■□□□ 1.75
TOP2B-204ENST00000435706 GOLGA8BA8MQT2 603 aa25.97■■□□□ 1.75
TOP2B-204ENST00000435706 ANAPC15P60006 121 aa25.97■■□□□ 1.75
TOP2B-204ENST00000435706 OGFRQ9NZT2 677 aa25.97■■□□□ 1.75
TOP2B-204ENST00000435706 BCCIPQ9P287 314 aaKnown RBP eCLIP25.97■■□□□ 1.75
TOP2B-204ENST00000435706 ESCO1Q5FWF5 840 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 PHAXQ9H814 394 aaKnown RBP25.96■■□□□ 1.75
TOP2B-204ENST00000435706 IGSF3O75054 1194 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 LIG1P18858 919 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 EZRP15311 586 aaKnown RBP25.96■■□□□ 1.75
TOP2B-204ENST00000435706 ISM2Q6H9L7 571 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 FEZ1Q99689 392 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 DNA2P51530 1060 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 CCDC178Q5BJE1 867 aa25.96■■□□□ 1.75
TOP2B-204ENST00000435706 ARHGAP45Q92619 1136 aa25.95■■□□□ 1.75
TOP2B-204ENST00000435706 F13A1P00488 732 aa25.95■■□□□ 1.74
TOP2B-204ENST00000435706 CAMSAP2Q08AD1 1489 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms