RNA–Protein interactions for RNA: ENST00000435676.2

FAM78B-203, Transcript of family with sequence similarity 78 member B, humanhuman

TSL 2

Gene FAM78B, Length 4,410 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-203ENST00000435676 ATP6V1DQ9Y5K8 247 aa11.1□□□□□ -0.63
FAM78B-203ENST00000435676 JCADQ9P266 1359 aa11.1□□□□□ -0.63
FAM78B-203ENST00000435676 USP6P35125 1406 aa11.1□□□□□ -0.63
FAM78B-203ENST00000435676 PER1O15534 1290 aaPredicted RBP11.1□□□□□ -0.63
FAM78B-203ENST00000435676 IKQ13123 557 aaPredicted RBP11.1□□□□□ -0.63
FAM78B-203ENST00000435676 SF3A1Q15459 793 aaKnown RBP11.1□□□□□ -0.63
FAM78B-203ENST00000435676 NOL8Q76FK4 1167 aaKnown RBP11.1□□□□□ -0.63
FAM78B-203ENST00000435676 THRAP3Q9Y2W1 955 aaKnown RBP11.1□□□□□ -0.63
FAM78B-203ENST00000435676 ZMYM4Q5VZL5 1548 aa11.1□□□□□ -0.63
FAM78B-203ENST00000435676 LDHCP07864 332 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 FKBP4Q02790 459 aaKnown RBP eCLIP11.09□□□□□ -0.63
FAM78B-203ENST00000435676 KSR2Q6VAB6 950 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 LDHAL6AQ6ZMR3 332 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 ARHGAP45Q92619 1136 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 RSPH6AQ9H0K4 717 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 ZNF287Q9HBT7 754 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 WDR17Q8IZU2 1322 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 ANKRD18AQ8IVF6 992 aa11.09□□□□□ -0.63
FAM78B-203ENST00000435676 ATP5J2-PTCD1G3V325 749 aa11.08□□□□□ -0.63
FAM78B-203ENST00000435676 ZNF790Q6PG37 636 aa11.08□□□□□ -0.63
FAM78B-203ENST00000435676 CHPF2Q9P2E5 772 aa11.08□□□□□ -0.63
FAM78B-203ENST00000435676 CTNNA3Q9UI47 895 aa11.08□□□□□ -0.63
FAM78B-203ENST00000435676 NBR1Q14596 966 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 AATKQ6ZMQ8 1374 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 SAFBQ15424 915 aaKnown RBP eCLIP11.08□□□□□ -0.64
FAM78B-203ENST00000435676 NCBP3Q53F19 620 aaKnown RBP11.08□□□□□ -0.64
FAM78B-203ENST00000435676 F6X3S4 739 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 XBP1P17861 261 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
FAM78B-203ENST00000435676 DDX21Q9NR30 783 aaKnown RBP eCLIP11.08□□□□□ -0.64
FAM78B-203ENST00000435676 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
FAM78B-203ENST00000435676 DZIP1Q86YF9 867 aaKnown RBP11.07□□□□□ -0.64
FAM78B-203ENST00000435676 LINS1Q8NG48 757 aa11.07□□□□□ -0.64
FAM78B-203ENST00000435676 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
FAM78B-203ENST00000435676 SYAP1Q96A49 352 aaPredicted RBP11.07□□□□□ -0.64
FAM78B-203ENST00000435676 CLTCQ00610 1675 aaKnown RBP11.07□□□□□ -0.64
FAM78B-203ENST00000435676 GLRX3O76003 335 aaKnown RBP11.07□□□□□ -0.64
FAM78B-203ENST00000435676 MAP3K12Q12852 859 aa11.07□□□□□ -0.64
FAM78B-203ENST00000435676 SPTY2D1Q68D10 685 aaPredicted RBP11.07□□□□□ -0.64
FAM78B-203ENST00000435676 IDH1O75874 414 aaKnown RBP11.06□□□□□ -0.64
FAM78B-203ENST00000435676 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
FAM78B-203ENST00000435676 ABCA6Q8N139 1617 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 SPATA31A6Q5VVP1 1343 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 SPRYD3Q8NCJ5 442 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 PRR36Q9H6K5 1346 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
FAM78B-203ENST00000435676 SETD1BQ9UPS6 1966 aaKnown RBP11.06□□□□□ -0.64
FAM78B-203ENST00000435676 EYA3Q99504 573 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 BRMS1Q9HCU9 246 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
FAM78B-203ENST00000435676 KDM5AP29375 1690 aaKnown RBP11.05□□□□□ -0.64
FAM78B-203ENST00000435676 CNBD1Q8NA66 436 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
FAM78B-203ENST00000435676 CAMSAP1Q5T5Y3 1602 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 ANXA1P04083 346 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 PHACTR3Q96KR7 559 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 ZC3H13Q5T200 1668 aaKnown RBP11.05□□□□□ -0.64
FAM78B-203ENST00000435676 RBM6P78332 1123 aaKnown RBP11.05□□□□□ -0.64
FAM78B-203ENST00000435676 JDP2Q8WYK2 163 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
FAM78B-203ENST00000435676 NOP58Q9Y2X3 529 aaKnown RBP11.05□□□□□ -0.64
FAM78B-203ENST00000435676 UQCRFS1P1P0C7P4 283 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 TDO2P48775 406 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 AIDAQ96BJ3 306 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 IL1RAPL2Q9NP60 686 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 CROCC2H7BZ55 1655 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 AFF2P51816 1311 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 GRM8O00222 908 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 MYO1BO43795 1136 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 PHKG2P15735 406 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 PTCH1Q13635 1447 aa11.04□□□□□ -0.64
FAM78B-203ENST00000435676 CLTCL1P53675 1640 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 ALKQ9UM73 1620 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 PDE4AP27815 886 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 TTF1Q15361 905 aaPredicted RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 ZGPATQ8N5A5 531 aaKnown RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 EXOC6BQ9Y2D4 811 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 TNS3Q68CZ2 1445 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 ATP2B2Q01814 1243 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 CHD1LQ86WJ1 897 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 SPHKAPQ2M3C7 1700 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 RIMS1Q86UR5 1692 aaKnown RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 USP5P45974 858 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 SEPT12Q8IYM1 358 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 CRACR2BQ8N4Y2 399 aaPredicted RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 TRIM44Q96DX7 344 aaPredicted RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 ZC3H12CQ9C0D7 883 aaKnown RBP11.03□□□□□ -0.64
FAM78B-203ENST00000435676 ANKRD2Q9GZV1 360 aa11.03□□□□□ -0.64
FAM78B-203ENST00000435676 RBM17Q96I25 401 aaKnown RBP11.02□□□□□ -0.64
FAM78B-203ENST00000435676 ERBB3P21860 1342 aa11.02□□□□□ -0.64
FAM78B-203ENST00000435676 BAG3O95817 575 aa11.02□□□□□ -0.65
FAM78B-203ENST00000435676 PLCB2Q00722 1185 aa11.02□□□□□ -0.65
FAM78B-203ENST00000435676 ERBB4Q15303 1308 aa11.02□□□□□ -0.65
FAM78B-203ENST00000435676 MCTP1Q6DN14 999 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms