RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 CCDC8Q9H0W5 538 aaPredicted RBP14.84□□□□□ -0.03
CLDN4-203ENST00000435050 CWC27Q6UX04 472 aaKnown RBP14.83□□□□□ -0.03
CLDN4-203ENST00000435050 HYPKQ9NX55 129 aa14.83□□□□□ -0.03
CLDN4-203ENST00000435050 NAP1L2Q9ULW6 460 aaPredicted RBP14.83□□□□□ -0.03
CLDN4-203ENST00000435050 ZNF790Q6PG37 636 aa14.83□□□□□ -0.04
CLDN4-203ENST00000435050 KIF1BPQ96EK5 621 aa14.83□□□□□ -0.04
CLDN4-203ENST00000435050 NEUROD6Q96NK8 337 aa14.83□□□□□ -0.04
CLDN4-203ENST00000435050 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
CLDN4-203ENST00000435050 ADAMTS2O95450 1211 aa14.83□□□□□ -0.04
CLDN4-203ENST00000435050 UPF3BQ9BZI7 483 aaKnown RBP14.83□□□□□ -0.04
CLDN4-203ENST00000435050 RHPN1Q8TCX5 695 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 ZNF496Q96IT1 587 aaPredicted RBP14.82□□□□□ -0.04
CLDN4-203ENST00000435050 ERBB3P21860 1342 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 FGD1P98174 961 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 ZBTB3Q9H5J0 574 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 FAM177BA6PVY3 158 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 GIGYF1O75420 1035 aaPredicted RBP14.82□□□□□ -0.04
CLDN4-203ENST00000435050 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 KDRP35968 1356 aa14.82□□□□□ -0.04
CLDN4-203ENST00000435050 RABEP1Q15276 862 aa14.81□□□□□ -0.04
CLDN4-203ENST00000435050 CNTROBQ8N137 903 aa14.81□□□□□ -0.04
CLDN4-203ENST00000435050 SLAIN2Q9P270 581 aa14.81□□□□□ -0.04
CLDN4-203ENST00000435050 ZNF335Q9H4Z2 1342 aaPredicted RBP14.81□□□□□ -0.04
CLDN4-203ENST00000435050 LARP1Q6PKG0 1096 aaKnown RBP14.81□□□□□ -0.04
CLDN4-203ENST00000435050 UBE3BQ7Z3V4 1068 aa14.81□□□□□ -0.04
CLDN4-203ENST00000435050 PIP4K2BP78356 416 aa14.81□□□□□ -0.04
CLDN4-203ENST00000435050 ZCRB1Q8TBF4 217 aaKnown RBP14.81□□□□□ -0.04
CLDN4-203ENST00000435050 SNRPA1P09661 255 aaKnown RBP14.8□□□□□ -0.04
CLDN4-203ENST00000435050 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
CLDN4-203ENST00000435050 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
CLDN4-203ENST00000435050 USP16Q9Y5T5 823 aa14.8□□□□□ -0.04
CLDN4-203ENST00000435050 SSH2Q76I76 1423 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 LARP6Q9BRS8 491 aaKnown RBP14.79□□□□□ -0.04
CLDN4-203ENST00000435050 A0A087WZG4 1122 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
CLDN4-203ENST00000435050 SLC52A2Q9HAB3 445 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 FSD1Q9BTV5 496 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 BOLA2Q9H3K6 86 aa14.79□□□□□ -0.04
CLDN4-203ENST00000435050 GRM8O00222 908 aa14.78□□□□□ -0.04
CLDN4-203ENST00000435050 BABAM1Q9NWV8 329 aa14.78□□□□□ -0.04
CLDN4-203ENST00000435050 ANKRD26Q9UPS8 1709 aa14.78□□□□□ -0.04
CLDN4-203ENST00000435050 PHKG2P15735 406 aa14.78□□□□□ -0.04
CLDN4-203ENST00000435050 DDX21Q9NR30 783 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLDN4-203ENST00000435050 RAB11FIP3O75154 756 aa14.77□□□□□ -0.04
CLDN4-203ENST00000435050 DCAF5Q96JK2 942 aa14.77□□□□□ -0.04
CLDN4-203ENST00000435050 MCM4P33991 863 aa14.77□□□□□ -0.05
CLDN4-203ENST00000435050 SOS1Q07889 1333 aaPredicted RBP14.77□□□□□ -0.05
CLDN4-203ENST00000435050 TMOD3Q9NYL9 352 aa14.77□□□□□ -0.05
CLDN4-203ENST00000435050 C1orf167Q5SNV9 1468 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 BEND3Q5T5X7 828 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 LINS1Q8NG48 757 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 RUFY2Q8WXA3 655 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 BICC1Q9H694 974 aaKnown RBP14.76□□□□□ -0.05
CLDN4-203ENST00000435050 DDX49Q9Y6V7 483 aaKnown RBP14.76□□□□□ -0.05
CLDN4-203ENST00000435050 TRAK2O60296 914 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 MCTP1Q6DN14 999 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 BRINP3Q76B58 766 aa14.76□□□□□ -0.05
CLDN4-203ENST00000435050 DDX11L8A8MPP1 907 aa14.75□□□□□ -0.05
CLDN4-203ENST00000435050 ERC1Q8IUD2 1116 aa14.75□□□□□ -0.05
CLDN4-203ENST00000435050 ANP32BQ92688 251 aaKnown RBP14.75□□□□□ -0.05
CLDN4-203ENST00000435050 RBM25P49756 843 aaKnown RBP14.74□□□□□ -0.05
CLDN4-203ENST00000435050 SUCLG2Q96I99 432 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 SETD1AO15047 1707 aaKnown RBP14.74□□□□□ -0.05
CLDN4-203ENST00000435050 GOLGA6L3A6NEY3 463 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 A1BGP04217 495 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 HOXB7P09629 217 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 IL2RBP14784 551 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 USP26Q9BXU7 913 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 BTG4Q9NY30 223 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 CD2BP2O95400 341 aaKnown RBP14.74□□□□□ -0.05
CLDN4-203ENST00000435050 SSFA2P28290 1259 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 RGPD8O14715 1765 aaPredicted RBP14.74□□□□□ -0.05
CLDN4-203ENST00000435050 ALDH1L1O75891 902 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 BRPF3Q9ULD4 1205 aa14.74□□□□□ -0.05
CLDN4-203ENST00000435050 CYP27B1O15528 508 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 GLRX3O76003 335 aaKnown RBP14.73□□□□□ -0.05
CLDN4-203ENST00000435050 ESYT1Q9BSJ8 1104 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 MON2Q7Z3U7 1717 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 NPHP1O15259 732 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 GPTP24298 496 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 UNC5CLQ8IV45 518 aa14.73□□□□□ -0.05
CLDN4-203ENST00000435050 TNPO1Q92973 898 aaKnown RBP14.72□□□□□ -0.05
CLDN4-203ENST00000435050 ECHDC1Q9NTX5 307 aa14.72□□□□□ -0.05
CLDN4-203ENST00000435050 DTNBO60941 627 aa14.71□□□□□ -0.05
CLDN4-203ENST00000435050 ZKSCAN1P17029 563 aaPredicted RBP14.71□□□□□ -0.05
CLDN4-203ENST00000435050 KNDC1Q76NI1 1749 aa14.71□□□□□ -0.05
CLDN4-203ENST00000435050 CHMLP26374 656 aa14.71□□□□□ -0.05
CLDN4-203ENST00000435050 SSH3Q8TE77 659 aa14.71□□□□□ -0.05
CLDN4-203ENST00000435050 SPATA31A3Q5VYP0 1347 aa14.71□□□□□ -0.05
CLDN4-203ENST00000435050 NRKQ7Z2Y5 1582 aa14.7□□□□□ -0.06
CLDN4-203ENST00000435050 LMBR1LQ6UX01 489 aa14.7□□□□□ -0.06
CLDN4-203ENST00000435050 KIF6Q6ZMV9 814 aa14.7□□□□□ -0.06
CLDN4-203ENST00000435050 HSP90B1P14625 803 aaKnown RBP14.7□□□□□ -0.06
CLDN4-203ENST00000435050 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
CLDN4-203ENST00000435050 PRPF40BQ6NWY9 871 aaKnown RBP14.7□□□□□ -0.06
CLDN4-203ENST00000435050 L1TD1Q5T7N2 865 aaKnown RBP14.69□□□□□ -0.06
CLDN4-203ENST00000435050 NDUFB9Q9Y6M9 179 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms