RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 PPP1R42Q7Z4L9 355 aa16.22■□□□□ 0.19
SCRN1-207ENST00000434476 ADCY9O60503 1353 aa16.22■□□□□ 0.19
SCRN1-207ENST00000434476 SPATA31A3Q5VYP0 1347 aa16.22■□□□□ 0.19
SCRN1-207ENST00000434476 MCM4P33991 863 aa16.22■□□□□ 0.19
SCRN1-207ENST00000434476 MTX1Q13505 466 aa16.22■□□□□ 0.19
SCRN1-207ENST00000434476 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.19
SCRN1-207ENST00000434476 PHKG2P15735 406 aa16.21■□□□□ 0.19
SCRN1-207ENST00000434476 BCL11AQ9H165 835 aa16.21■□□□□ 0.19
SCRN1-207ENST00000434476 SLC52A2Q9HAB3 445 aa16.21■□□□□ 0.19
SCRN1-207ENST00000434476 DDX21Q9NR30 783 aaKnown RBP eCLIP16.21■□□□□ 0.19
SCRN1-207ENST00000434476 CPDO75976 1380 aa16.21■□□□□ 0.19
SCRN1-207ENST00000434476 SIPA1L3O60292 1781 aaPredicted RBP16.2■□□□□ 0.18
SCRN1-207ENST00000434476 EPB41L2O43491 1005 aaKnown RBP16.2■□□□□ 0.18
SCRN1-207ENST00000434476 SURF6O75683 361 aaKnown RBP16.2■□□□□ 0.18
SCRN1-207ENST00000434476 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
SCRN1-207ENST00000434476 IFNL2Q8IZJ0 200 aa16.2■□□□□ 0.18
SCRN1-207ENST00000434476 KIF1BPQ96EK5 621 aa16.2■□□□□ 0.18
SCRN1-207ENST00000434476 STRCP1A6NGW2 1772 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 COL18A1P39060 1754 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 SRGAP3O43295 1099 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 ZNF790Q6PG37 636 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 IL27Q8NEV9 243 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
SCRN1-207ENST00000434476 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
SCRN1-207ENST00000434476 LINS1Q8NG48 757 aa16.18■□□□□ 0.18
SCRN1-207ENST00000434476 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
SCRN1-207ENST00000434476 DCAF5Q96JK2 942 aa16.18■□□□□ 0.18
SCRN1-207ENST00000434476 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
SCRN1-207ENST00000434476 ANXA1P04083 346 aa16.17■□□□□ 0.18
SCRN1-207ENST00000434476 HSP90AA1P07900 732 aaKnown RBP16.17■□□□□ 0.18
SCRN1-207ENST00000434476 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
SCRN1-207ENST00000434476 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
SCRN1-207ENST00000434476 UTYO14607 1347 aa16.17■□□□□ 0.18
SCRN1-207ENST00000434476 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
SCRN1-207ENST00000434476 DDX11L8A8MPP1 907 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 CD2BP2O95400 341 aaKnown RBP16.16■□□□□ 0.18
SCRN1-207ENST00000434476 PTMSP20962 102 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 CHMLP26374 656 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 C9orf78Q9NZ63 289 aaPredicted RBP16.16■□□□□ 0.18
SCRN1-207ENST00000434476 KDM6AO15550 1401 aaPredicted RBP16.16■□□□□ 0.18
SCRN1-207ENST00000434476 ST18O60284 1047 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 RAB3GAP1Q15042 981 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 PDIA6Q15084 440 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 PROSER3Q2NL68 480 aa16.16■□□□□ 0.18
SCRN1-207ENST00000434476 USP42Q9H9J4 1324 aaKnown RBP16.15■□□□□ 0.18
SCRN1-207ENST00000434476 TRIM6-TRIM34B2RNG4 842 aa16.15■□□□□ 0.18
SCRN1-207ENST00000434476 MCCP23508 829 aa16.15■□□□□ 0.18
SCRN1-207ENST00000434476 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
SCRN1-207ENST00000434476 ERC1Q8IUD2 1116 aa16.15■□□□□ 0.18
SCRN1-207ENST00000434476 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
SCRN1-207ENST00000434476 IL17RAQ96F46 866 aa16.15■□□□□ 0.18
SCRN1-207ENST00000434476 ANAPC15P60006 121 aa16.14■□□□□ 0.17
SCRN1-207ENST00000434476 CABLES1Q8TDN4 633 aa16.14■□□□□ 0.17
SCRN1-207ENST00000434476 RILPL2Q969X0 211 aa16.14■□□□□ 0.17
SCRN1-207ENST00000434476 GBP4Q96PP9 640 aa16.14■□□□□ 0.17
SCRN1-207ENST00000434476 MEGF6O75095 1541 aa16.14■□□□□ 0.17
SCRN1-207ENST00000434476 MRC1P22897 1456 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 SCN11AQ9UI33 1791 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 PRAMEF22A3QJZ6 481 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 GRM8O00222 908 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 SNRPA1P09661 255 aaKnown RBP16.13■□□□□ 0.17
SCRN1-207ENST00000434476 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 CWC22Q9HCG8 908 aaKnown RBP16.13■□□□□ 0.17
SCRN1-207ENST00000434476 IL1RAPL2Q9NP60 686 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 TTC41PQ6P2S7 1318 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
SCRN1-207ENST00000434476 MCM2P49736 904 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 HSPA2P54652 639 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 CHRNA2Q15822 529 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 TSHZ3Q63HK5 1081 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 CLEC17AQ6ZS10 378 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 PI4K2BQ8TCG2 481 aa16.12■□□□□ 0.17
SCRN1-207ENST00000434476 TNPO1Q92973 898 aaKnown RBP16.12■□□□□ 0.17
SCRN1-207ENST00000434476 CYP27B1O15528 508 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 NEXNQ0ZGT2 675 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 SLC39A6Q13433 755 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 RIC3Q7Z5B4 369 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 NUTM1Q86Y26 1132 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 TTC5Q8N0Z6 440 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 FMNL2Q96PY5 1086 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 TUBGCP6Q96RT7 1819 aa16.11■□□□□ 0.17
SCRN1-207ENST00000434476 TRAK2O60296 914 aa16.1■□□□□ 0.17
SCRN1-207ENST00000434476 CLASRPQ8N2M8 674 aaKnown RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 SOS2Q07890 1332 aaPredicted RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 GLRX3O76003 335 aaKnown RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 CABP4P57796 275 aa16.1■□□□□ 0.17
SCRN1-207ENST00000434476 NUCB2P80303 420 aa16.1■□□□□ 0.17
SCRN1-207ENST00000434476 OS9Q13438 667 aaPredicted RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 CWF19L2Q2TBE0 894 aaKnown RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 SKOR2Q2VWA4 1001 aaPredicted RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 CNTROBQ8N137 903 aa16.1■□□□□ 0.17
SCRN1-207ENST00000434476 ZNF496Q96IT1 587 aaPredicted RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 METTL22Q9BUU2 404 aaPredicted RBP16.1■□□□□ 0.17
SCRN1-207ENST00000434476 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
SCRN1-207ENST00000434476 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
SCRN1-207ENST00000434476 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
SCRN1-207ENST00000434476 XAGE3Q8WTP9 111 aa16.09■□□□□ 0.17
SCRN1-207ENST00000434476 GPATCH3Q96I76 525 aa16.09■□□□□ 0.17
SCRN1-207ENST00000434476 SLAIN2Q9P270 581 aa16.09■□□□□ 0.17
SCRN1-207ENST00000434476 ERBB4Q15303 1308 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms