RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.543e-24■□□□□ 11.2
FN1-209ENST00000432072 PATL2C9JE40 543 aaKnown RBP11.69□□□□□ -0.54
FN1-209ENST00000432072 TRAPPC3LQ5T215 181 aa11.69□□□□□ -0.54
FN1-209ENST00000432072 SAMM50Q9Y512 469 aa11.69□□□□□ -0.54
FN1-209ENST00000432072 CTCFLQ8NI51 663 aaPredicted RBP11.68□□□□□ -0.54
FN1-209ENST00000432072 RBM19Q9Y4C8 960 aaKnown RBP11.68□□□□□ -0.54
FN1-209ENST00000432072 KRT32Q14532 448 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 KIF1BPQ96EK5 621 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 DEF6Q9H4E7 631 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 TPTE2Q6XPS3 522 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 RAB11FIP3O75154 756 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 CEP131Q9UPN4 1083 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 MYO5CQ9NQX4 1742 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 CCDC196A0A1B0GTZ2 297 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 NEFHP12036 1026 aa11.68□□□□□ -0.54
FN1-209ENST00000432072 PDE4BQ07343 736 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 ZNF804AQ7Z570 1209 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 APBA3O96018 575 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 MAP3K2Q9Y2U5 619 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 B4DLN1 442 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 PDE4AP27815 886 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 TNNI2P48788 182 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 MRPL12P52815 198 aaKnown RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 TTF1Q15361 905 aaPredicted RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 CKAP2LQ8IYA6 745 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 CEP57L1Q8IYX8 460 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 SIRT1Q96EB6 747 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 IL1RAPL2Q9NP60 686 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 DUOX2Q9NRD8 1548 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 SSR1P43307 286 aaKnown RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 EIF6P56537 245 aaKnown RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 RIMS2Q9UQ26 1411 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 CATIPQ7Z7H3 387 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 RAB34Q9BZG1 259 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 RNF41Q9H4P4 317 aaPredicted RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 DACH1Q9UI36 760 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 THOC2Q8NI27 1593 aaKnown RBP11.67□□□□□ -0.54
FN1-209ENST00000432072 ME1P48163 572 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 KIF1BO60333 1816 aa11.67□□□□□ -0.54
FN1-209ENST00000432072 LRRFIP2Q9Y608 721 aaKnown RBP11.66□□□□□ -0.54
FN1-209ENST00000432072 ATP5J2-PTCD1G3V325 749 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 LIG1P18858 919 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 MVPQ14764 893 aaKnown RBP11.66□□□□□ -0.54
FN1-209ENST00000432072 BOLA2Q9H3K6 86 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 SMC2O95347 1197 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 BAG4O95429 457 aaKnown RBP11.66□□□□□ -0.54
FN1-209ENST00000432072 CCDC181Q5TID7 509 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 ZNF213O14771 459 aa11.66□□□□□ -0.54
FN1-209ENST00000432072 GNPATO15228 680 aa11.65□□□□□ -0.54
FN1-209ENST00000432072 TRMT1LQ7Z2T5 733 aaKnown RBP11.65□□□□□ -0.54
FN1-209ENST00000432072 IFT57Q9NWB7 429 aa11.65□□□□□ -0.54
FN1-209ENST00000432072 TTC21AQ8NDW8 1320 aa11.65□□□□□ -0.54
FN1-209ENST00000432072 VAT1LQ9HCJ6 419 aa11.65□□□□□ -0.54
FN1-209ENST00000432072 SEPT7Q16181 437 aaKnown RBP11.65□□□□□ -0.54
FN1-209ENST00000432072 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
FN1-209ENST00000432072 RFX1P22670 979 aa11.65□□□□□ -0.54
FN1-209ENST00000432072 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
FN1-209ENST00000432072 TMEM266Q2M3C6 531 aa11.65□□□□□ -0.55
FN1-209ENST00000432072 EYA3Q99504 573 aa11.65□□□□□ -0.55
FN1-209ENST00000432072 CRNKL1Q9BZJ0 848 aaKnown RBP11.65□□□□□ -0.55
FN1-209ENST00000432072 TSPY2A6NKD2 308 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 H0YIN7 160 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 SETQ01105 290 aaPredicted RBP11.64□□□□□ -0.55
FN1-209ENST00000432072 EAPPQ56P03 285 aaPredicted RBP11.64□□□□□ -0.55
FN1-209ENST00000432072 PPP4R3BQ5MIZ7 849 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 UTP14AQ9BVJ6 771 aaKnown RBP11.64□□□□□ -0.55
FN1-209ENST00000432072 NCOA1Q15788 1441 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 PRXQ9BXM0 1461 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 RIMBP2O15034 1052 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 TTC16Q8NEE8 873 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 RBM17Q96I25 401 aaKnown RBP11.64□□□□□ -0.55
FN1-209ENST00000432072 UBA5Q9GZZ9 404 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 NOM1Q5C9Z4 860 aaKnown RBP11.64□□□□□ -0.55
FN1-209ENST00000432072 TXLNBQ8N3L3 684 aa11.64□□□□□ -0.55
FN1-209ENST00000432072 ERLIN2O94905 339 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 AEBP1Q8IUX7 1158 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 DNAAF4Q8WXU2 420 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 SYCP2Q9BX26 1530 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 PICK1Q9NRD5 415 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 NCBP1Q09161 790 aaKnown RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 THUMPD2Q9BTF0 503 aaKnown RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 UBE3BQ7Z3V4 1068 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 KIF5BP33176 963 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 ZRSR2Q15696 482 aaKnown RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 CCNL1Q9UK58 526 aaPredicted RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 LRSAM1Q6UWE0 723 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 CDCA7Q9BWT1 371 aaPredicted RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 SLC12A7Q9Y666 1083 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 PICALMQ13492 652 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 JAKMIP1Q96N16 626 aaKnown RBP11.63□□□□□ -0.55
FN1-209ENST00000432072 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
FN1-209ENST00000432072 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 ADGRF5Q8IZF2 1346 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 NUTM1Q86Y26 1132 aa11.62□□□□□ -0.55
FN1-209ENST00000432072 GLRX3O76003 335 aaKnown RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms