RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 NUCB2P80303 420 aa13.83□□□□□ -0.19
CLDN4-202ENST00000431918 CCDC8Q9H0W5 538 aaPredicted RBP13.83□□□□□ -0.19
CLDN4-202ENST00000431918 USP44Q9H0E7 712 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 PLCB2Q00722 1185 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 TAF7LQ5H9L4 462 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 ATP5J2-PTCD1G3V325 749 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 GORABQ5T7V8 394 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 RUFY2Q8WXA3 655 aa13.83□□□□□ -0.2
CLDN4-202ENST00000431918 USP31Q70CQ4 1352 aa13.82□□□□□ -0.2
CLDN4-202ENST00000431918 PRAMEF22A3QJZ6 481 aa13.82□□□□□ -0.2
CLDN4-202ENST00000431918 CD2BP2O95400 341 aaKnown RBP13.82□□□□□ -0.2
CLDN4-202ENST00000431918 FSD1Q9BTV5 496 aa13.82□□□□□ -0.2
CLDN4-202ENST00000431918 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
CLDN4-202ENST00000431918 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
CLDN4-202ENST00000431918 COPS6Q7L5N1 327 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 XAGE3Q8WTP9 111 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 SNX21Q969T3 373 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 CCDC85AQ96PX6 553 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-202ENST00000431918 BOLA2Q9H3K6 86 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 CIZ1Q9ULV3 898 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-202ENST00000431918 PDE4CQ08493 712 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 CAVIN1Q6NZI2 390 aaKnown RBP13.8□□□□□ -0.2
CLDN4-202ENST00000431918 CADPS2Q86UW7 1296 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
CLDN4-202ENST00000431918 HYPKQ9NX55 129 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 RAB11FIP3O75154 756 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 PTMSP20962 102 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 SKOR2Q2VWA4 1001 aaPredicted RBP13.8□□□□□ -0.2
CLDN4-202ENST00000431918 IFNL2Q8IZJ0 200 aa13.8□□□□□ -0.2
CLDN4-202ENST00000431918 PROSER3Q2NL68 480 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 ARHGEF25Q86VW2 580 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 REREQ9P2R6 1566 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 ZKSCAN1P17029 563 aaPredicted RBP13.79□□□□□ -0.2
CLDN4-202ENST00000431918 ESYT1Q9BSJ8 1104 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 AXIN2Q9Y2T1 843 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 KSR2Q6VAB6 950 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 CRB1P82279 1406 aa13.79□□□□□ -0.2
CLDN4-202ENST00000431918 LARP1Q6PKG0 1096 aaKnown RBP13.79□□□□□ -0.2
CLDN4-202ENST00000431918 SOS1Q07889 1333 aaPredicted RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 RRP9O43818 475 aaKnown RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 RBM10P98175 930 aaKnown RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 ZGPATQ8N5A5 531 aaKnown RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 UBE3BQ7Z3V4 1068 aa13.78□□□□□ -0.2
CLDN4-202ENST00000431918 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
CLDN4-202ENST00000431918 PTMAP06454 111 aaKnown RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 HSP90B1P14625 803 aaKnown RBP13.78□□□□□ -0.2
CLDN4-202ENST00000431918 ERC1Q8IUD2 1116 aa13.78□□□□□ -0.2
CLDN4-202ENST00000431918 KLHDC4Q8TBB5 520 aa13.78□□□□□ -0.2
CLDN4-202ENST00000431918 ANTXR1Q9H6X2 564 aa13.78□□□□□ -0.2
CLDN4-202ENST00000431918 KIF24Q5T7B8 1368 aa13.77□□□□□ -0.2
CLDN4-202ENST00000431918 GLRX3O76003 335 aaKnown RBP13.77□□□□□ -0.2
CLDN4-202ENST00000431918 DIP2AQ14689 1571 aa13.77□□□□□ -0.21
CLDN4-202ENST00000431918 NPHP3Q7Z494 1330 aa13.77□□□□□ -0.21
CLDN4-202ENST00000431918 NPHP4O75161 1426 aaPredicted RBP13.77□□□□□ -0.21
CLDN4-202ENST00000431918 GRM8O00222 908 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 DTNBO60941 627 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 VPS37CA5D8V6 355 aaPredicted RBP13.76□□□□□ -0.21
CLDN4-202ENST00000431918 CHMLP26374 656 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 A0A087WZG4 1122 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 GIGYF1O75420 1035 aaPredicted RBP13.76□□□□□ -0.21
CLDN4-202ENST00000431918 ZNF790Q6PG37 636 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 SMC3Q9UQE7 1217 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 ANKARQ7Z5J8 1434 aa13.76□□□□□ -0.21
CLDN4-202ENST00000431918 FMNL2Q96PY5 1086 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 CEP170BQ9Y4F5 1589 aaPredicted RBP13.75□□□□□ -0.21
CLDN4-202ENST00000431918 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
CLDN4-202ENST00000431918 ANKRD13DQ6ZTN6 518 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 UNC5CLQ8IV45 518 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
CLDN4-202ENST00000431918 JAKMIP1Q96N16 626 aaKnown RBP13.75□□□□□ -0.21
CLDN4-202ENST00000431918 ECHDC1Q9NTX5 307 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 BABAM1Q9NWV8 329 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 FAM177BA6PVY3 158 aa13.75□□□□□ -0.21
CLDN4-202ENST00000431918 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
CLDN4-202ENST00000431918 BAG4O95429 457 aaKnown RBP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 SNRPA1P09661 255 aaKnown RBP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
CLDN4-202ENST00000431918 BICC1Q9H694 974 aaKnown RBP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 KDRP35968 1356 aa13.74□□□□□ -0.21
CLDN4-202ENST00000431918 MCM2P49736 904 aa13.74□□□□□ -0.21
CLDN4-202ENST00000431918 DDX21Q9NR30 783 aaKnown RBP eCLIP13.74□□□□□ -0.21
CLDN4-202ENST00000431918 TMEM94Q12767 1356 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 MRE11P49959 708 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 BEND3Q5T5X7 828 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.73□□□□□ -0.21
CLDN4-202ENST00000431918 RNF214Q8ND24 703 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 PANK2Q9BZ23 570 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 UBR1Q8IWV7 1749 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 FOSBP53539 338 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 USP16Q9Y5T5 823 aa13.73□□□□□ -0.21
CLDN4-202ENST00000431918 GRPEL1Q9HAV7 217 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 GDPD2Q9HCC8 539 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 NRXN3Q9Y4C0 1643 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 ANKRD26Q9UPS8 1709 aa13.72□□□□□ -0.21
CLDN4-202ENST00000431918 ALDH1L1O75891 902 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms