RNA–Protein interactions for RNA: ENST00000431623.6

POLR2B-203, Transcript of RNA polymerase II subunit B, humanhuman

TSL 2 BASIC

Gene POLR2B, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-203ENST00000431623 HSP90AB3PQ58FF7 597 aa5.88□□□□□ -1.47
POLR2B-203ENST00000431623 MPRIPQ6WCQ1 1025 aa5.88□□□□□ -1.47
POLR2B-203ENST00000431623 PALLDQ8WX93 1383 aa5.88□□□□□ -1.47
POLR2B-203ENST00000431623 PLSCR1O15162 318 aa5.88□□□□□ -1.47
POLR2B-203ENST00000431623 YTHDC1Q96MU7 727 aaKnown RBP5.88□□□□□ -1.47
POLR2B-203ENST00000431623 INTS3Q68E01 1043 aaKnown RBP5.87□□□□□ -1.47
POLR2B-203ENST00000431623 ATF7IPQ6VMQ6 1270 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 LGR6Q9HBX8 967 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 SMC4Q9NTJ3 1288 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 DDX19BQ9UMR2 479 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 ERVV-1B6SEH8 477 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 IL6STP40189 918 aaPredicted RBP5.87□□□□□ -1.47
POLR2B-203ENST00000431623 NEUROD2Q15784 382 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 FAM98CQ17RN3 349 aaKnown RBP5.87□□□□□ -1.47
POLR2B-203ENST00000431623 FLAD1Q8NFF5 587 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 CDCA7LQ96GN5 454 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 AK7Q96M32 723 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 SPINK5Q9NQ38 1064 aaPredicted RBP5.87□□□□□ -1.47
POLR2B-203ENST00000431623 ATG3Q9NT62 314 aa5.87□□□□□ -1.47
POLR2B-203ENST00000431623 UBR3Q6ZT12 1888 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 PIGBQ92521 554 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 TRIM28Q13263 835 aaKnown RBP5.86□□□□□ -1.47
POLR2B-203ENST00000431623 C8orf58Q8NAV2 365 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 C4AP0C0L4 1744 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 AFDNP55196 1824 aaKnown RBP5.86□□□□□ -1.47
POLR2B-203ENST00000431623 DZIP1LQ8IYY4 767 aaKnown RBP5.86□□□□□ -1.47
POLR2B-203ENST00000431623 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 SSH1Q8WYL5 1049 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 UTYO14607 1347 aa5.86□□□□□ -1.47
POLR2B-203ENST00000431623 DDX54Q8TDD1 881 aaKnown RBP5.85□□□□□ -1.47
POLR2B-203ENST00000431623 TSR2Q969E8 191 aaKnown RBP5.85□□□□□ -1.47
POLR2B-203ENST00000431623 NRXN2Q9P2S2 1712 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 MVPQ14764 893 aaKnown RBP5.85□□□□□ -1.47
POLR2B-203ENST00000431623 PLBD2Q8NHP8 589 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 GNAI3P08754 354 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 CANXP27824 592 aaKnown RBP5.85□□□□□ -1.47
POLR2B-203ENST00000431623 DCTN1Q14203 1278 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 CLEC4GQ6UXB4 293 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 KSR2Q6VAB6 950 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 ZNF496Q96IT1 587 aaPredicted RBP5.85□□□□□ -1.47
POLR2B-203ENST00000431623 CCDC87Q9NVE4 849 aa5.85□□□□□ -1.47
POLR2B-203ENST00000431623 DDX60Q8IY21 1712 aaKnown RBP5.84□□□□□ -1.47
POLR2B-203ENST00000431623 THUMPD2Q9BTF0 503 aaKnown RBP5.84□□□□□ -1.47
POLR2B-203ENST00000431623 ZNF652Q9Y2D9 606 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 LRP5O75197 1615 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 LOC102724428A0A0B4J2F2 783 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 CYP19A1P11511 503 aaPredicted RBP5.84□□□□□ -1.47
POLR2B-203ENST00000431623 SIK1P57059 783 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 FLIIQ13045 1269 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 FTSJ3Q8IY81 847 aaKnown RBP5.84□□□□□ -1.47
POLR2B-203ENST00000431623 RTL9Q8NET4 1388 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 PPP4R2Q9NY27 417 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 PDZRN3Q9UPQ7 1066 aa5.84□□□□□ -1.47
POLR2B-203ENST00000431623 LAS1LQ9Y4W2 734 aaKnown RBP5.84□□□□□ -1.47
POLR2B-203ENST00000431623 EIF5BO60841 1220 aaKnown RBP5.84□□□□□ -1.48
POLR2B-203ENST00000431623 SSFA2P28290 1259 aa5.84□□□□□ -1.48
POLR2B-203ENST00000431623 PRIM1P49642 420 aaKnown RBP5.84□□□□□ -1.48
POLR2B-203ENST00000431623 PARP10Q53GL7 1025 aa5.84□□□□□ -1.48
POLR2B-203ENST00000431623 KIF6Q6ZMV9 814 aa5.84□□□□□ -1.48
POLR2B-203ENST00000431623 LRP10Q7Z4F1 713 aa5.84□□□□□ -1.48
POLR2B-203ENST00000431623 RNF216Q9NWF9 866 aaPredicted RBP5.84□□□□□ -1.48
POLR2B-203ENST00000431623 CDHR2Q9BYE9 1310 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 NEXNQ0ZGT2 675 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 LINS1Q8NG48 757 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 FBXO3Q9UK99 471 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 NUP98P52948 1817 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 RPS6KA4O75676 772 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 MAP3K15Q6ZN16 1313 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 PDIA6Q15084 440 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 TICAM2Q86XR7 235 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 DNAAF4Q8WXU2 420 aa5.83□□□□□ -1.48
POLR2B-203ENST00000431623 METTL22Q9BUU2 404 aaPredicted RBP5.83□□□□□ -1.48
POLR2B-203ENST00000431623 DUOX1Q9NRD9 1551 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 TUBGCP6Q96RT7 1819 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 ADCY9O60503 1353 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 TRIM27P14373 513 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 EIF5P55010 431 aaKnown RBP5.82□□□□□ -1.48
POLR2B-203ENST00000431623 MTX1Q13505 466 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 RPAP2Q8IXW5 612 aaPredicted RBP5.82□□□□□ -1.48
POLR2B-203ENST00000431623 TSPYL6Q8N831 410 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 CCDC191Q8NCU4 936 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 PLA2G12BQ9BX93 195 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 RGS17Q9UGC6 210 aaPredicted RBP5.82□□□□□ -1.48
POLR2B-203ENST00000431623 MYH3P11055 1940 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 IGSF3O75054 1194 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 SLC4A2P04920 1241 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 HDAC1Q13547 482 aaPredicted RBP5.82□□□□□ -1.48
POLR2B-203ENST00000431623 USP35Q9P2H5 1018 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 NOB1Q9ULX3 412 aaKnown RBP5.82□□□□□ -1.48
POLR2B-203ENST00000431623 CASZ1Q86V15 1759 aa5.82□□□□□ -1.48
POLR2B-203ENST00000431623 HMMRO75330 724 aa5.81□□□□□ -1.48
POLR2B-203ENST00000431623 BAG6P46379 1132 aa5.81□□□□□ -1.48
POLR2B-203ENST00000431623 NPM2Q86SE8 214 aaKnown RBP5.81□□□□□ -1.48
POLR2B-203ENST00000431623 PELP1Q8IZL8 1130 aaKnown RBP5.81□□□□□ -1.48
POLR2B-203ENST00000431623 SRCIN1Q9C0H9 1055 aa5.81□□□□□ -1.48
POLR2B-203ENST00000431623 CHPF2Q9P2E5 772 aa5.81□□□□□ -1.48
POLR2B-203ENST00000431623 SALL2Q9Y467 1007 aaPredicted RBP5.81□□□□□ -1.48
POLR2B-203ENST00000431623 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
POLR2B-203ENST00000431623 CLUAP1Q96AJ1 413 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms