RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 PNMA6EA0A0J9YXQ4 647 aa20.79■□□□□ 0.92
USHBP1-203ENST00000431146 PDIA6Q15084 440 aa20.79■□□□□ 0.92
USHBP1-203ENST00000431146 BEND3Q5T5X7 828 aa20.79■□□□□ 0.92
USHBP1-203ENST00000431146 MAP3K2Q9Y2U5 619 aa20.79■□□□□ 0.92
USHBP1-203ENST00000431146 UBTFL1P0CB47 393 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-203ENST00000431146 MYL6BP14649 208 aa20.78■□□□□ 0.92
USHBP1-203ENST00000431146 PIP4K2AP48426 406 aaPredicted RBP20.78■□□□□ 0.92
USHBP1-203ENST00000431146 USP16Q9Y5T5 823 aa20.78■□□□□ 0.92
USHBP1-203ENST00000431146 HMMRO75330 724 aa20.78■□□□□ 0.92
USHBP1-203ENST00000431146 DDX21Q9NR30 783 aaKnown RBP eCLIP20.78■□□□□ 0.92
USHBP1-203ENST00000431146 HYPKQ9NX55 129 aa20.77■□□□□ 0.92
USHBP1-203ENST00000431146 NBPF7P0C2Y1 421 aaPredicted RBP20.77■□□□□ 0.91
USHBP1-203ENST00000431146 OTUD7AQ8TE49 926 aaPredicted RBP20.77■□□□□ 0.91
USHBP1-203ENST00000431146 COL16A1Q07092 1604 aaPredicted RBP20.77■□□□□ 0.91
USHBP1-203ENST00000431146 PIP4K2BP78356 416 aa20.76■□□□□ 0.91
USHBP1-203ENST00000431146 FMNL2Q96PY5 1086 aa20.76■□□□□ 0.91
USHBP1-203ENST00000431146 EXOC6BQ9Y2D4 811 aa20.76■□□□□ 0.91
USHBP1-203ENST00000431146 COL14A1Q05707 1796 aaKnown RBP20.76■□□□□ 0.91
USHBP1-203ENST00000431146 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
USHBP1-203ENST00000431146 SNRPA1P09661 255 aaKnown RBP20.75■□□□□ 0.91
USHBP1-203ENST00000431146 KSR2Q6VAB6 950 aa20.75■□□□□ 0.91
USHBP1-203ENST00000431146 COL22A1Q8NFW1 1626 aaPredicted RBP20.75■□□□□ 0.91
USHBP1-203ENST00000431146 ATP8B2P98198 1209 aa20.74■□□□□ 0.91
USHBP1-203ENST00000431146 PLEKHM2Q8IWE5 1019 aa20.74■□□□□ 0.91
USHBP1-203ENST00000431146 ADAMTS2O95450 1211 aa20.74■□□□□ 0.91
USHBP1-203ENST00000431146 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
USHBP1-203ENST00000431146 BMP2KLQ5H9B9 411 aa20.73■□□□□ 0.91
USHBP1-203ENST00000431146 GLI3P10071 1580 aa20.73■□□□□ 0.91
USHBP1-203ENST00000431146 ERVV-2B6SEH9 535 aa20.72■□□□□ 0.91
USHBP1-203ENST00000431146 NKX1-1Q15270 411 aaPredicted RBP20.72■□□□□ 0.91
USHBP1-203ENST00000431146 SLC4A3P48751 1232 aa20.72■□□□□ 0.91
USHBP1-203ENST00000431146 MFAP1P55081 439 aaKnown RBP20.72■□□□□ 0.91
USHBP1-203ENST00000431146 XAGE3Q8WTP9 111 aa20.72■□□□□ 0.91
USHBP1-203ENST00000431146 DDRGK1Q96HY6 314 aa20.72■□□□□ 0.91
USHBP1-203ENST00000431146 TOGARAM1Q9Y4F4 1720 aa20.71■□□□□ 0.91
USHBP1-203ENST00000431146 KAT6BQ8WYB5 2073 aa20.71■□□□□ 0.91
USHBP1-203ENST00000431146 COPS6Q7L5N1 327 aa20.71■□□□□ 0.91
USHBP1-203ENST00000431146 PTCD1O75127 700 aaKnown RBP20.7■□□□□ 0.9
USHBP1-203ENST00000431146 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
USHBP1-203ENST00000431146 GSPT1P15170 499 aaKnown RBP20.7■□□□□ 0.9
USHBP1-203ENST00000431146 UPF2Q9HAU5 1272 aaKnown RBP20.7■□□□□ 0.9
USHBP1-203ENST00000431146 PPP1R42Q7Z4L9 355 aa20.69■□□□□ 0.9
USHBP1-203ENST00000431146 RIC3Q7Z5B4 369 aa20.69■□□□□ 0.9
USHBP1-203ENST00000431146 NUTM2BA6NNL0 878 aaPredicted RBP20.69■□□□□ 0.9
USHBP1-203ENST00000431146 NUTM2EB1AL46 878 aaPredicted RBP20.69■□□□□ 0.9
USHBP1-203ENST00000431146 NUTM2AQ8IVF1 878 aaPredicted RBP20.69■□□□□ 0.9
USHBP1-203ENST00000431146 UBR2Q8IWV8 1755 aa20.68■□□□□ 0.9
USHBP1-203ENST00000431146 LRP10Q7Z4F1 713 aa20.68■□□□□ 0.9
USHBP1-203ENST00000431146 C9orf78Q9NZ63 289 aaPredicted RBP20.68■□□□□ 0.9
USHBP1-203ENST00000431146 LAMB4A4D0S4 1761 aa20.68■□□□□ 0.9
USHBP1-203ENST00000431146 TBC1D32Q96NH3 1257 aa20.68■□□□□ 0.9
USHBP1-203ENST00000431146 PLCH1Q4KWH8 1693 aa20.67■□□□□ 0.9
USHBP1-203ENST00000431146 SRGAP3O43295 1099 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 ALDH1L1O75891 902 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 LINS1Q8NG48 757 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 SSH3Q8TE77 659 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 KCPQ6ZWJ8 1503 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 PAPPAQ13219 1627 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 TTC22Q5TAA0 569 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 LRRCC1Q9C099 1032 aa20.66■□□□□ 0.9
USHBP1-203ENST00000431146 DISP2A7MBM2 1401 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 IBTKQ9P2D0 1353 aaPredicted RBP20.65■□□□□ 0.9
USHBP1-203ENST00000431146 TOM1O60784 492 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 IGKV5-2P06315 115 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 TMOD3Q9NYL9 352 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 TSHZ3Q63HK5 1081 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 MYD88Q99836 296 aa20.65■□□□□ 0.9
USHBP1-203ENST00000431146 POLA2Q14181 598 aa20.64■□□□□ 0.89
USHBP1-203ENST00000431146 TBC1D9Q6ZT07 1266 aa20.64■□□□□ 0.89
USHBP1-203ENST00000431146 ANKRD13DQ6ZTN6 518 aa20.64■□□□□ 0.89
USHBP1-203ENST00000431146 NBPF26B4DH59 902 aa20.63■□□□□ 0.89
USHBP1-203ENST00000431146 NBPF14Q5TI25 921 aa20.63■□□□□ 0.89
USHBP1-203ENST00000431146 NBPF10Q6P3W6 841 aaKnown RBP20.63■□□□□ 0.89
USHBP1-203ENST00000431146 NBPF15Q8N660 670 aa20.63■□□□□ 0.89
USHBP1-203ENST00000431146 SURF6O75683 361 aaKnown RBP20.63■□□□□ 0.89
USHBP1-203ENST00000431146 A1BGP04217 495 aa20.63■□□□□ 0.89
USHBP1-203ENST00000431146 ITGB4P16144 1822 aa20.63■□□□□ 0.89
USHBP1-203ENST00000431146 GRM8O00222 908 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 PIGBQ92521 554 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 C22orf23Q9BZE7 217 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 IL1RAPL2Q9NP60 686 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 ASAP1Q9ULH1 1129 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 NEXNQ0ZGT2 675 aa20.62■□□□□ 0.89
USHBP1-203ENST00000431146 METTL22Q9BUU2 404 aaPredicted RBP20.62■□□□□ 0.89
USHBP1-203ENST00000431146 ARFGEF2Q9Y6D5 1785 aa20.61■□□□□ 0.89
USHBP1-203ENST00000431146 NEURL1BA8MQ27 555 aa20.61■□□□□ 0.89
USHBP1-203ENST00000431146 PDE1AP54750 535 aa20.61■□□□□ 0.89
USHBP1-203ENST00000431146 SUCLG2Q96I99 432 aa20.61■□□□□ 0.89
USHBP1-203ENST00000431146 DAXXQ9UER7 740 aaPredicted RBP20.61■□□□□ 0.89
USHBP1-203ENST00000431146 WNK3Q9BYP7 1800 aa20.61■□□□□ 0.89
USHBP1-203ENST00000431146 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 TNS2Q63HR2 1409 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
USHBP1-203ENST00000431146 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
USHBP1-203ENST00000431146 EXOC5O00471 708 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 SDSP20132 328 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 NRAPQ86VF7 1730 aa20.6■□□□□ 0.89
USHBP1-203ENST00000431146 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
USHBP1-203ENST00000431146 CDC45O75419 566 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms