RNA–Protein interactions for RNA: ENST00000431028.5

GTF3C2-205, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-205ENST00000431028 FOXN1O15353 648 aa11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 PLEKHO1Q53GL0 409 aaPredicted RBP11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 USPL1Q5W0Q7 1092 aa11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 DPY19L2Q6NUT2 758 aa11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 INTS5Q6P9B9 1019 aaKnown RBP11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 TTLL6Q8N841 843 aa11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 NRXN2Q9P2S2 1712 aa11.54□□□□□ -0.56
GTF3C2-205ENST00000431028 MTHFSP49914 203 aa11.53□□□□□ -0.56
GTF3C2-205ENST00000431028 NFIXQ14938 502 aa11.53□□□□□ -0.56
GTF3C2-205ENST00000431028 NFATC2IPQ8NCF5 419 aa11.53□□□□□ -0.56
GTF3C2-205ENST00000431028 PRDM10Q9NQV6 1147 aa11.53□□□□□ -0.56
GTF3C2-205ENST00000431028 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.57
GTF3C2-205ENST00000431028 CHADLQ6NUI6 762 aa11.52□□□□□ -0.57
GTF3C2-205ENST00000431028 SOS1Q07889 1333 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-205ENST00000431028 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
GTF3C2-205ENST00000431028 POTEIP0CG38 1075 aa11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 POTEJP0CG39 1038 aa11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 TNNT2P45379 298 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 C1orf141Q5JVX7 400 aa11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 C2CD5Q86YS7 1000 aa11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
GTF3C2-205ENST00000431028 H0YIN7 160 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 SERPINB2P05120 415 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 CTCFP49711 727 aaPredicted RBP11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 ERFEQ4G0M1 354 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 DNAJC10Q8IXB1 793 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 AIDAQ96BJ3 306 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 NARFQ9UHQ1 456 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 COL15A1P39059 1388 aa11.5□□□□□ -0.57
GTF3C2-205ENST00000431028 DICER1Q9UPY3 1922 aaKnown RBP11.49□□□□□ -0.57
GTF3C2-205ENST00000431028 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
GTF3C2-205ENST00000431028 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 AEBP1Q8IUX7 1158 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 ZBTB1Q9Y2K1 713 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 PASKQ96RG2 1323 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 SCN11AQ9UI33 1791 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
GTF3C2-205ENST00000431028 C21orf2O43822 256 aa11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 DDNO94850 711 aaPredicted RBP11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 VEGFBP49765 207 aa11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 LBX1P52954 281 aa11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 ZNF219Q9P2Y4 722 aaPredicted RBP11.47□□□□□ -0.57
GTF3C2-205ENST00000431028 ANKRD31Q8N7Z5 1873 aa11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 ABHD8Q96I13 439 aa11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 TAOK3Q9H2K8 898 aa11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 WBP1LQ9NX94 342 aa11.46□□□□□ -0.57
GTF3C2-205ENST00000431028 COL11A2P13942 1736 aaPredicted RBP11.46□□□□□ -0.58
GTF3C2-205ENST00000431028 LTBP3Q9NS15 1303 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 VIRMAQ69YN4 1812 aaKnown RBP11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 IQCA1LA6NCM1 817 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 TMEM88BA6NKF7 163 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 SLC39A6Q13433 755 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 LDHDQ86WU2 507 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 SLC52A2Q9HAB3 445 aa11.45□□□□□ -0.58
GTF3C2-205ENST00000431028 PDE6BP35913 854 aa11.44□□□□□ -0.58
GTF3C2-205ENST00000431028 BRIP1Q9BX63 1249 aa11.44□□□□□ -0.58
GTF3C2-205ENST00000431028 PDZRN3Q9UPQ7 1066 aa11.44□□□□□ -0.58
GTF3C2-205ENST00000431028 SCN4AP35499 1836 aa11.44□□□□□ -0.58
GTF3C2-205ENST00000431028 MRC1P22897 1456 aa11.44□□□□□ -0.58
GTF3C2-205ENST00000431028 ITGBL1O95965 494 aaPredicted RBP11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 HSPA8P11142 646 aaKnown RBP11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 SULT6B1Q6IMI4 303 aa11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 CCDC24Q8N4L8 307 aa11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 TAF1DQ9H5J8 278 aaPredicted RBP11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 LGR6Q9HBX8 967 aa11.43□□□□□ -0.58
GTF3C2-205ENST00000431028 AKAP4Q5JQC9 854 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 TBC1D9BQ66K14 1250 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 PRR5LQ6MZQ0 368 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 PCDH10Q9P2E7 1040 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 SCN7AQ01118 1682 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 SLX4Q8IY92 1834 aa11.42□□□□□ -0.58
GTF3C2-205ENST00000431028 CACNA1SQ13698 1873 aa11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 RASSF10A6NK89 507 aa11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 EIF5P55010 431 aaKnown RBP11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 MLLT1Q03111 559 aaPredicted RBP11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 EAPPQ56P03 285 aaPredicted RBP11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 PRPF40BQ6NWY9 871 aaKnown RBP11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 VSIG10Q8N0Z9 540 aa11.41□□□□□ -0.58
GTF3C2-205ENST00000431028 A0A087WZG4 1122 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 RNMTO43148 476 aaKnown RBP11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 MAP2K1Q02750 393 aaPredicted RBP11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 DEFB115Q30KQ5 88 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 SOGA3Q5TF21 947 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 CNKSR1Q969H4 720 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 POLR3GLQ9BT43 218 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 UBR2Q8IWV8 1755 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 ADAMTSL1Q8N6G6 1762 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 ARFGEF2Q9Y6D5 1785 aa11.4□□□□□ -0.58
GTF3C2-205ENST00000431028 WDR33Q9C0J8 1336 aaKnown RBP11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 SRGNP10124 158 aa11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 STYK1Q6J9G0 422 aa11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 CNBD1Q8NA66 436 aa11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 HACL1Q9UJ83 578 aa11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
GTF3C2-205ENST00000431028 ZNF541Q9H0D2 1346 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms