RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 IL1RAPL2Q9NP60 686 aa16.22■□□□□ 0.19
SNRNP200-202ENST00000429650 MED1Q15648 1581 aaPredicted RBP16.22■□□□□ 0.19
SNRNP200-202ENST00000429650 CUL4AQ13619 759 aa16.21■□□□□ 0.19
SNRNP200-202ENST00000429650 IL17RAQ96F46 866 aa16.21■□□□□ 0.19
SNRNP200-202ENST00000429650 PPP1R9BQ96SB3 815 aa16.21■□□□□ 0.19
SNRNP200-202ENST00000429650 POLA2Q14181 598 aa16.21■□□□□ 0.19
SNRNP200-202ENST00000429650 RAB11FIP3O75154 756 aa16.2■□□□□ 0.18
SNRNP200-202ENST00000429650 PPP1R42Q7Z4L9 355 aa16.2■□□□□ 0.18
SNRNP200-202ENST00000429650 GPT2Q8TD30 523 aa16.2■□□□□ 0.18
SNRNP200-202ENST00000429650 IP6K1Q92551 441 aa16.2■□□□□ 0.18
SNRNP200-202ENST00000429650 KDM3BQ7LBC6 1761 aa16.2■□□□□ 0.18
SNRNP200-202ENST00000429650 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 CHAMP1Q96JM3 812 aa16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 NFAT5O94916 1531 aa16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 SETD1BQ9UPS6 1966 aaKnown RBP16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 EIF2S2P20042 333 aaKnown RBP16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 NUTM1Q86Y26 1132 aa16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 IL25Q9H293 177 aa16.19■□□□□ 0.18
SNRNP200-202ENST00000429650 NBPF6Q5VWK0 638 aa16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 INTS4Q96HW7 963 aaKnown RBP16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 NBPF4Q96M43 638 aa16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 LGR6Q9HBX8 967 aa16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 EPB41L2O43491 1005 aaKnown RBP16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 BRD1O95696 1058 aa16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 RHPN1Q8TCX5 695 aa16.18■□□□□ 0.18
SNRNP200-202ENST00000429650 HOXB7P09629 217 aa16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 FOXD4L5Q5VV16 416 aaPredicted RBP16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 PI4K2BQ8TCG2 481 aa16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 FOXD4L4Q8WXT5 416 aaPredicted RBP16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 ANP32BQ92688 251 aaKnown RBP16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 CHPF2Q9P2E5 772 aa16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 NBPF7P0C2Y1 421 aaPredicted RBP16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 RBM27Q9P2N5 1060 aaKnown RBP16.17■□□□□ 0.18
SNRNP200-202ENST00000429650 SRGAP3O43295 1099 aa16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 BEND3Q5T5X7 828 aa16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 NOL8Q76FK4 1167 aaKnown RBP16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 UPF3BQ9BZI7 483 aaKnown RBP16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 RGPD2P0DJD1 1756 aa16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 DNAAF4Q8WXU2 420 aa16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 KIF1BPQ96EK5 621 aa16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 NAP1L5Q96NT1 182 aaPredicted RBP16.16■□□□□ 0.18
SNRNP200-202ENST00000429650 PI4KAP2A4QPH2 592 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 KCNQ3O43525 872 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 HSPA4P34932 840 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 PI4KAP1Q8N8J0 262 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 RBSNQ9H1K0 784 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 LMO7Q8WWI1 1683 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 MAP4K4O95819 1239 aaPredicted RBP16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 TMEM63CQ9P1W3 806 aa16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 CHD2O14647 1828 aaKnown RBP16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 NSFL1CQ9UNZ2 370 aaKnown RBP16.15■□□□□ 0.18
SNRNP200-202ENST00000429650 ZBTB7CA1YPR0 619 aa16.14■□□□□ 0.17
SNRNP200-202ENST00000429650 SGSM2O43147 1006 aa16.14■□□□□ 0.17
SNRNP200-202ENST00000429650 RAD50Q92878 1312 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 PHRF1Q9P1Y6 1649 aaKnown RBP16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 ADCY9O60503 1353 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 CRYBG1Q9Y4K1 1723 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 MBD3O95983 291 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 ANXA1P04083 346 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 AKAP4Q5JQC9 854 aa16.13■□□□□ 0.17
SNRNP200-202ENST00000429650 BTBD11A6QL63 1104 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 TEFQ10587 303 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 ZNF530Q6P9A1 599 aaPredicted RBP16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 LRSAM1Q6UWE0 723 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 CNTROBQ8N137 903 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 HSP90AB4PQ58FF6 505 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 LRRC59Q96AG4 307 aaKnown RBP16.12■□□□□ 0.17
SNRNP200-202ENST00000429650 ZSCAN30Q86W11 494 aa16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 USP42Q9H9J4 1324 aaKnown RBP16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 SYCE3A1L190 88 aa16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 PSME1Q06323 249 aa16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 MPRIPQ6WCQ1 1025 aa16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 LSG1Q9H089 658 aaKnown RBP16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 ADGRL3Q9HAR2 1447 aa16.11■□□□□ 0.17
SNRNP200-202ENST00000429650 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
SNRNP200-202ENST00000429650 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
SNRNP200-202ENST00000429650 MTX1Q13505 466 aa16.1■□□□□ 0.17
SNRNP200-202ENST00000429650 PDLIM2Q96JY6 352 aa16.1■□□□□ 0.17
SNRNP200-202ENST00000429650 ESCO1Q5FWF5 840 aa16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 DBF4Q9UBU7 674 aaPredicted RBP16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 FBXO3Q9UK99 471 aa16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 PXDNQ92626 1479 aa16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 TTC41PQ6P2S7 1318 aa16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 TTC14Q96N46 770 aa16.09■□□□□ 0.17
SNRNP200-202ENST00000429650 RNMTO43148 476 aaKnown RBP16.08■□□□□ 0.17
SNRNP200-202ENST00000429650 NCAPD2Q15021 1401 aa16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 GLRX3O76003 335 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 AMOTQ4VCS5 1084 aa16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 CWC27Q6UX04 472 aaKnown RBP16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 RASEFQ8IZ41 740 aa16.08■□□□□ 0.16
SNRNP200-202ENST00000429650 HS1BP3Q53T59 392 aa16.07■□□□□ 0.16
SNRNP200-202ENST00000429650 MAP3K2Q9Y2U5 619 aa16.07■□□□□ 0.16
SNRNP200-202ENST00000429650 RPAP1Q9BWH6 1393 aaPredicted RBP16.07■□□□□ 0.16
SNRNP200-202ENST00000429650 TCHHQ07283 1943 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms