RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 ZNF853P0CG23 659 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 UBE2HP62256 183 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 SPATA32Q96LK8 384 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 ZFYVE9O95405 1425 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
SGMS1-203ENST00000429490 PA2G4Q9UQ80 394 aaKnown RBP16.38■□□□□ 0.21
SGMS1-203ENST00000429490 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
SGMS1-203ENST00000429490 KIF1BO60333 1816 aa16.37■□□□□ 0.21
SGMS1-203ENST00000429490 RIC3Q7Z5B4 369 aa16.37■□□□□ 0.21
SGMS1-203ENST00000429490 NRDCO43847 1150 aa16.36■□□□□ 0.21
SGMS1-203ENST00000429490 GLRX3O76003 335 aaKnown RBP16.36■□□□□ 0.21
SGMS1-203ENST00000429490 NEUROD6Q96NK8 337 aa16.36■□□□□ 0.21
SGMS1-203ENST00000429490 F13A1P00488 732 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 BRPF1P55201 1214 aaPredicted RBP16.35■□□□□ 0.21
SGMS1-203ENST00000429490 EYA1Q99502 592 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 TET3O43151 1660 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 POGZQ7Z3K3 1410 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 MYL6BP14649 208 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 ANAPC15P60006 121 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 MPRIPQ6WCQ1 1025 aa16.35■□□□□ 0.21
SGMS1-203ENST00000429490 ZNF500O60304 480 aaPredicted RBP16.34■□□□□ 0.21
SGMS1-203ENST00000429490 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
SGMS1-203ENST00000429490 ZNF530Q6P9A1 599 aaPredicted RBP16.34■□□□□ 0.21
SGMS1-203ENST00000429490 RNF17Q9BXT8 1623 aaKnown RBP16.34■□□□□ 0.21
SGMS1-203ENST00000429490 CSB-PGBD3P0DP91 1061 aa16.34■□□□□ 0.21
SGMS1-203ENST00000429490 INTS4Q96HW7 963 aaKnown RBP16.34■□□□□ 0.21
SGMS1-203ENST00000429490 SDF4Q9BRK5 362 aa16.34■□□□□ 0.21
SGMS1-203ENST00000429490 MAP3K19Q56UN5 1328 aa16.34■□□□□ 0.21
SGMS1-203ENST00000429490 PDCP20941 246 aa16.34■□□□□ 0.21
SGMS1-203ENST00000429490 PSMA5P28066 241 aa16.34■□□□□ 0.21
SGMS1-203ENST00000429490 GUCY1B3Q02153 619 aa16.33■□□□□ 0.21
SGMS1-203ENST00000429490 CCDC186Q7Z3E2 898 aa16.33■□□□□ 0.21
SGMS1-203ENST00000429490 LUZP1Q86V48 1076 aa16.33■□□□□ 0.21
SGMS1-203ENST00000429490 DNAAF4Q8WXU2 420 aa16.33■□□□□ 0.21
SGMS1-203ENST00000429490 CHPF2Q9P2E5 772 aa16.33■□□□□ 0.21
SGMS1-203ENST00000429490 NEXNQ0ZGT2 675 aa16.33■□□□□ 0.2
SGMS1-203ENST00000429490 GORABQ5T7V8 394 aa16.33■□□□□ 0.2
SGMS1-203ENST00000429490 LRRC2Q9BYS8 371 aa16.33■□□□□ 0.2
SGMS1-203ENST00000429490 CEP152O94986 1710 aa16.33■□□□□ 0.2
SGMS1-203ENST00000429490 NBPF7P0C2Y1 421 aaPredicted RBP16.33■□□□□ 0.2
SGMS1-203ENST00000429490 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.2
SGMS1-203ENST00000429490 HDAC5Q9UQL6 1122 aa16.33■□□□□ 0.2
SGMS1-203ENST00000429490 PTGS1P23219 599 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 TRMT1Q9NXH9 659 aaKnown RBP16.32■□□□□ 0.2
SGMS1-203ENST00000429490 DACT1Q9NYF0 836 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 SNX14Q9Y5W7 946 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 ZCCHC11Q5TAX3 1644 aaKnown RBP16.32■□□□□ 0.2
SGMS1-203ENST00000429490 BTBD11A6QL63 1104 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 PSME1Q06323 249 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 RASEFQ8IZ41 740 aa16.32■□□□□ 0.2
SGMS1-203ENST00000429490 FAM135BQ49AJ0 1406 aa16.31■□□□□ 0.2
SGMS1-203ENST00000429490 CEBPAP49715 358 aaPredicted RBP16.31■□□□□ 0.2
SGMS1-203ENST00000429490 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
SGMS1-203ENST00000429490 HOMER1Q86YM7 354 aa16.31■□□□□ 0.2
SGMS1-203ENST00000429490 CHMP4AQ9BY43 222 aa16.31■□□□□ 0.2
SGMS1-203ENST00000429490 ECHDC1Q9NTX5 307 aa16.31■□□□□ 0.2
SGMS1-203ENST00000429490 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.31■□□□□ 0.2
SGMS1-203ENST00000429490 V9GYY5 206 aaPredicted RBP16.31■□□□□ 0.2
SGMS1-203ENST00000429490 SOS1Q07889 1333 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-203ENST00000429490 PTCH1Q13635 1447 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 ZSCAN31Q96LW9 406 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-203ENST00000429490 NCOA3Q9Y6Q9 1424 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 EFCAB6Q5THR3 1501 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 TULP4Q9NRJ4 1543 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
SGMS1-203ENST00000429490 TNNT1P13805 278 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 ANO6Q4KMQ2 910 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 USP44Q9H0E7 712 aa16.3■□□□□ 0.2
SGMS1-203ENST00000429490 RBM8AQ9Y5S9 174 aaKnown RBP16.3■□□□□ 0.2
SGMS1-203ENST00000429490 ME1P48163 572 aa16.29■□□□□ 0.2
SGMS1-203ENST00000429490 ZNF165P49910 485 aa16.29■□□□□ 0.2
SGMS1-203ENST00000429490 UVSSAQ2YD98 709 aa16.29■□□□□ 0.2
SGMS1-203ENST00000429490 PIK3R4Q99570 1358 aa16.29■□□□□ 0.2
SGMS1-203ENST00000429490 DDX58O95786 925 aaKnown RBP16.29■□□□□ 0.2
SGMS1-203ENST00000429490 CWF19L2Q2TBE0 894 aaKnown RBP16.29■□□□□ 0.2
SGMS1-203ENST00000429490 CCAR2Q8N163 923 aaKnown RBP16.29■□□□□ 0.2
SGMS1-203ENST00000429490 IBTKQ9P2D0 1353 aaPredicted RBP16.29■□□□□ 0.2
SGMS1-203ENST00000429490 SHROOM2Q13796 1616 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 KINO60870 393 aaKnown RBP16.28■□□□□ 0.2
SGMS1-203ENST00000429490 QRICH2Q9H0J4 1663 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 SGSM2O43147 1006 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 STK11IPQ8N1F8 1099 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 PRIMPOLQ96LW4 560 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 DNAJC25Q9H1X3 360 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 PPP6R1Q9UPN7 881 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 MAP3K2Q9Y2U5 619 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 TPM3P06753 285 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 PIBF1Q8WXW3 757 aa16.28■□□□□ 0.2
SGMS1-203ENST00000429490 SMC2O95347 1197 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 PDLIM2Q96JY6 352 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 CLIP2Q9UDT6 1046 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 CHD1O14646 1710 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 LRRC7Q96NW7 1537 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 MYOM1P52179 1685 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 HSPA4P34932 840 aa16.27■□□□□ 0.2
SGMS1-203ENST00000429490 SH2B1Q9NRF2 756 aaPredicted RBP16.27■□□□□ 0.19
SGMS1-203ENST00000429490 AMOTL2Q9Y2J4 779 aa16.27■□□□□ 0.19
SGMS1-203ENST00000429490 EDC4Q6P2E9 1401 aaKnown RBP16.27■□□□□ 0.19
SGMS1-203ENST00000429490 CCT2P78371 535 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms