RNA–Protein interactions for RNA: ENST00000429456.1

LINC01238-203, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 2,170 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-203ENST00000429456 MBD3O95983 291 aa13.96□□□□□ -0.17
LINC01238-203ENST00000429456 LRSAM1Q6UWE0 723 aa13.96□□□□□ -0.17
LINC01238-203ENST00000429456 IL25Q9H293 177 aa13.96□□□□□ -0.17
LINC01238-203ENST00000429456 NSFL1CQ9UNZ2 370 aaKnown RBP13.96□□□□□ -0.17
LINC01238-203ENST00000429456 LTN1O94822 1766 aa13.96□□□□□ -0.17
LINC01238-203ENST00000429456 HSPA4P34932 840 aa13.96□□□□□ -0.18
LINC01238-203ENST00000429456 HS1BP3Q53T59 392 aa13.96□□□□□ -0.18
LINC01238-203ENST00000429456 FOXD4L5Q5VV16 416 aaPredicted RBP13.96□□□□□ -0.18
LINC01238-203ENST00000429456 NUTM1Q86Y26 1132 aa13.96□□□□□ -0.18
LINC01238-203ENST00000429456 PI4K2BQ8TCG2 481 aa13.96□□□□□ -0.18
LINC01238-203ENST00000429456 FOXD4L4Q8WXT5 416 aaPredicted RBP13.96□□□□□ -0.18
LINC01238-203ENST00000429456 PDLIM2Q96JY6 352 aa13.96□□□□□ -0.18
LINC01238-203ENST00000429456 SURF6O75683 361 aaKnown RBP13.95□□□□□ -0.18
LINC01238-203ENST00000429456 KCNA6P17658 529 aa13.95□□□□□ -0.18
LINC01238-203ENST00000429456 USHBP1Q8N6Y0 703 aa13.95□□□□□ -0.18
LINC01238-203ENST00000429456 RHPN1Q8TCX5 695 aa13.95□□□□□ -0.18
LINC01238-203ENST00000429456 KDM3BQ7LBC6 1761 aa13.95□□□□□ -0.18
LINC01238-203ENST00000429456 HOXB7P09629 217 aa13.95□□□□□ -0.18
LINC01238-203ENST00000429456 EIF4A1P60842 406 aaKnown RBP13.95□□□□□ -0.18
LINC01238-203ENST00000429456 NOL8Q76FK4 1167 aaKnown RBP13.94□□□□□ -0.18
LINC01238-203ENST00000429456 KIF1BPQ96EK5 621 aa13.94□□□□□ -0.18
LINC01238-203ENST00000429456 UPF3BQ9BZI7 483 aaKnown RBP13.94□□□□□ -0.18
LINC01238-203ENST00000429456 BEND3Q5T5X7 828 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 IP6K1Q92551 441 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 SYCE3A1L190 88 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 SGSM2O43147 1006 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 RAD50Q92878 1312 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 CRYBG1Q9Y4K1 1723 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 FER1L4A9Z1Z3 1794 aa13.93□□□□□ -0.18
LINC01238-203ENST00000429456 SRGAP3O43295 1099 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 NBPF7P0C2Y1 421 aaPredicted RBP13.92□□□□□ -0.18
LINC01238-203ENST00000429456 EIF2S2P20042 333 aaKnown RBP13.92□□□□□ -0.18
LINC01238-203ENST00000429456 DNAAF4Q8WXU2 420 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 CHMP4AQ9BY43 222 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 LGR6Q9HBX8 967 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 NFAT5O94916 1531 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 MAP4K4O95819 1239 aaPredicted RBP13.92□□□□□ -0.18
LINC01238-203ENST00000429456 CHPF2Q9P2E5 772 aa13.92□□□□□ -0.18
LINC01238-203ENST00000429456 USP42Q9H9J4 1324 aaKnown RBP13.92□□□□□ -0.18
LINC01238-203ENST00000429456 MSNP26038 577 aaKnown RBP13.91□□□□□ -0.18
LINC01238-203ENST00000429456 NBPF6Q5VWK0 638 aa13.91□□□□□ -0.18
LINC01238-203ENST00000429456 CNTROBQ8N137 903 aa13.91□□□□□ -0.18
LINC01238-203ENST00000429456 NBPF4Q96M43 638 aa13.91□□□□□ -0.18
LINC01238-203ENST00000429456 LSG1Q9H089 658 aaKnown RBP13.91□□□□□ -0.18
LINC01238-203ENST00000429456 LMO7Q8WWI1 1683 aa13.91□□□□□ -0.18
LINC01238-203ENST00000429456 PI4KAP2A4QPH2 592 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 HSP90AB4PQ58FF6 505 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 PI4KAP1Q8N8J0 262 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 NOL7Q9UMY1 257 aaKnown RBP13.9□□□□□ -0.18
LINC01238-203ENST00000429456 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 SNX14Q9Y5W7 946 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 WDR33Q9C0J8 1336 aaKnown RBP13.9□□□□□ -0.18
LINC01238-203ENST00000429456 C14orf37Q86TY3 774 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 TTC14Q96N46 770 aa13.9□□□□□ -0.18
LINC01238-203ENST00000429456 ADCY9O60503 1353 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 KCNQ3O43525 872 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 OFD1O75665 1012 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 KLHL34Q8N239 644 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
LINC01238-203ENST00000429456 RGPD2P0DJD1 1756 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 TCHHQ07283 1943 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 RPAP1Q9BWH6 1393 aaPredicted RBP13.89□□□□□ -0.19
LINC01238-203ENST00000429456 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 TPM2P07951 284 aa13.89□□□□□ -0.19
LINC01238-203ENST00000429456 MTX1Q13505 466 aa13.88□□□□□ -0.19
LINC01238-203ENST00000429456 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
LINC01238-203ENST00000429456 SYAP1Q96A49 352 aaPredicted RBP13.88□□□□□ -0.19
LINC01238-203ENST00000429456 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.88□□□□□ -0.19
LINC01238-203ENST00000429456 PHRF1Q9P1Y6 1649 aaKnown RBP13.88□□□□□ -0.19
LINC01238-203ENST00000429456 RASEFQ8IZ41 740 aa13.88□□□□□ -0.19
LINC01238-203ENST00000429456 TMEM87AQ8NBN3 555 aa13.88□□□□□ -0.19
LINC01238-203ENST00000429456 ADGRL3Q9HAR2 1447 aa13.87□□□□□ -0.19
LINC01238-203ENST00000429456 BTBD11A6QL63 1104 aa13.87□□□□□ -0.19
LINC01238-203ENST00000429456 ZNF500O60304 480 aaPredicted RBP13.87□□□□□ -0.19
LINC01238-203ENST00000429456 GADD45BO75293 160 aaPredicted RBP13.87□□□□□ -0.19
LINC01238-203ENST00000429456 GLRX3O76003 335 aaKnown RBP13.87□□□□□ -0.19
LINC01238-203ENST00000429456 USP48Q86UV5 1035 aa13.87□□□□□ -0.19
LINC01238-203ENST00000429456 TSPY26PQ9H489 355 aa13.87□□□□□ -0.19
LINC01238-203ENST00000429456 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
LINC01238-203ENST00000429456 ANXA1P04083 346 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 AK2P54819 239 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 TEFQ10587 303 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-203ENST00000429456 KIAA1211Q6ZU35 1233 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 PLEKHO1Q53GL0 409 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-203ENST00000429456 ZNF530Q6P9A1 599 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-203ENST00000429456 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
LINC01238-203ENST00000429456 RUFY3Q7L099 469 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 GDPD2Q9HCC8 539 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 DBF4Q9UBU7 674 aaPredicted RBP13.86□□□□□ -0.19
LINC01238-203ENST00000429456 LIMCH1Q9UPQ0 1083 aa13.86□□□□□ -0.19
LINC01238-203ENST00000429456 ALDH1L1O75891 902 aa13.85□□□□□ -0.19
LINC01238-203ENST00000429456 KCNH5Q8NCM2 988 aa13.85□□□□□ -0.19
LINC01238-203ENST00000429456 ZKSCAN5Q9Y2L8 839 aa13.85□□□□□ -0.19
LINC01238-203ENST00000429456 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
LINC01238-203ENST00000429456 PHF14O94880 888 aa13.85□□□□□ -0.19
LINC01238-203ENST00000429456 MCM5P33992 734 aa13.85□□□□□ -0.19
LINC01238-203ENST00000429456 OS9Q13438 667 aaPredicted RBP13.85□□□□□ -0.19
LINC01238-203ENST00000429456 FOXD4L6Q3SYB3 417 aaPredicted RBP13.85□□□□□ -0.19
LINC01238-203ENST00000429456 FOXD4L3Q6VB84 417 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms