RNA–Protein interactions for RNA: ENST00000429436.6

MARK3-205, Transcript of microtubule affinity regulating kinase 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARK3, Length 3,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-205ENST00000429436 CCDC39Q9UFE4 941 aa17.77■□□□□ 0.44
MARK3-205ENST00000429436 KIF20AO95235 890 aa17.77■□□□□ 0.43
MARK3-205ENST00000429436 NLRP6P59044 892 aa17.77■□□□□ 0.43
MARK3-205ENST00000429436 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.43
MARK3-205ENST00000429436 KNDC1Q76NI1 1749 aa17.76■□□□□ 0.43
MARK3-205ENST00000429436 SURF6O75683 361 aaKnown RBP17.76■□□□□ 0.43
MARK3-205ENST00000429436 MCCP23508 829 aa17.76■□□□□ 0.43
MARK3-205ENST00000429436 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
MARK3-205ENST00000429436 RBM33Q96EV2 1170 aaKnown RBP17.76■□□□□ 0.43
MARK3-205ENST00000429436 RGS12O14924 1447 aa17.76■□□□□ 0.43
MARK3-205ENST00000429436 IL25Q9H293 177 aa17.76■□□□□ 0.43
MARK3-205ENST00000429436 PHAXQ9H814 394 aaKnown RBP17.76■□□□□ 0.43
MARK3-205ENST00000429436 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
MARK3-205ENST00000429436 ANKRD26Q9UPS8 1709 aa17.75■□□□□ 0.43
MARK3-205ENST00000429436 DLG5Q8TDM6 1919 aa17.75■□□□□ 0.43
MARK3-205ENST00000429436 ROBO2Q9HCK4 1378 aa17.75■□□□□ 0.43
MARK3-205ENST00000429436 CYP2E1P05181 493 aaPredicted RBP17.75■□□□□ 0.43
MARK3-205ENST00000429436 TRERF1Q96PN7 1200 aa17.75■□□□□ 0.43
MARK3-205ENST00000429436 CHRM1P11229 460 aaPredicted RBP17.74■□□□□ 0.43
MARK3-205ENST00000429436 CPA1P15085 419 aa17.74■□□□□ 0.43
MARK3-205ENST00000429436 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
MARK3-205ENST00000429436 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
MARK3-205ENST00000429436 LETM1O95202 739 aaPredicted RBP17.73■□□□□ 0.43
MARK3-205ENST00000429436 ZNF445P59923 1031 aa17.73■□□□□ 0.43
MARK3-205ENST00000429436 OS9Q13438 667 aaPredicted RBP17.73■□□□□ 0.43
MARK3-205ENST00000429436 UBTFL1P0CB47 393 aaPredicted RBP17.73■□□□□ 0.43
MARK3-205ENST00000429436 CHMLP26374 656 aa17.73■□□□□ 0.43
MARK3-205ENST00000429436 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
MARK3-205ENST00000429436 TNNT3P45378 269 aaPredicted RBP17.73■□□□□ 0.43
MARK3-205ENST00000429436 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
MARK3-205ENST00000429436 PDCL2Q8N4E4 241 aa17.72■□□□□ 0.43
MARK3-205ENST00000429436 CCDC30Q5VVM6 783 aa17.72■□□□□ 0.43
MARK3-205ENST00000429436 MYRIPQ8NFW9 859 aa17.72■□□□□ 0.43
MARK3-205ENST00000429436 PDLIM2Q96JY6 352 aa17.72■□□□□ 0.43
MARK3-205ENST00000429436 USP25Q9UHP3 1055 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 SPG7Q9UQ90 795 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 LTKP29376 864 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 CWC27Q6UX04 472 aaKnown RBP17.71■□□□□ 0.43
MARK3-205ENST00000429436 CLEC17AQ6ZS10 378 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 CHMP3Q9Y3E7 222 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 KIF3AQ9Y496 699 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 CLGNO14967 610 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 GNAI3P08754 354 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 HDGFL1Q5TGJ6 251 aa17.71■□□□□ 0.43
MARK3-205ENST00000429436 BCL2L12Q9HB09 334 aa17.7■□□□□ 0.42
MARK3-205ENST00000429436 SRGAP3O43295 1099 aa17.7■□□□□ 0.42
MARK3-205ENST00000429436 LRSAM1Q6UWE0 723 aa17.7■□□□□ 0.42
MARK3-205ENST00000429436 CDC42BPGQ6DT37 1551 aa17.69■□□□□ 0.42
MARK3-205ENST00000429436 HS1BP3Q53T59 392 aa17.69■□□□□ 0.42
MARK3-205ENST00000429436 PPP1R42Q7Z4L9 355 aa17.69■□□□□ 0.42
MARK3-205ENST00000429436 ATP8B2P98198 1209 aa17.69■□□□□ 0.42
MARK3-205ENST00000429436 GTPBP4Q9BZE4 634 aaKnown RBP17.69■□□□□ 0.42
MARK3-205ENST00000429436 TRIM34Q9BYJ4 488 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 CLTCQ00610 1675 aaKnown RBP17.68■□□□□ 0.42
MARK3-205ENST00000429436 GNAT3A8MTJ3 354 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 NOLC1Q14978 699 aaKnown RBP eCLIP17.68■□□□□ 0.42
MARK3-205ENST00000429436 USP44Q9H0E7 712 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 KIAA0232Q92628 1395 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 KIF24Q5T7B8 1368 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 USP48Q86UV5 1035 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 AMOTL2Q9Y2J4 779 aa17.68■□□□□ 0.42
MARK3-205ENST00000429436 FIBPO43427 364 aa17.67■□□□□ 0.42
MARK3-205ENST00000429436 IL17REQ8NFR9 667 aa17.67■□□□□ 0.42
MARK3-205ENST00000429436 ERICH4A6NGS2 130 aa17.67■□□□□ 0.42
MARK3-205ENST00000429436 CRB1P82279 1406 aa17.67■□□□□ 0.42
MARK3-205ENST00000429436 NBPF7P0C2Y1 421 aaPredicted RBP17.66■□□□□ 0.42
MARK3-205ENST00000429436 ABTB2Q8N961 1025 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 TAF3Q5VWG9 929 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 RICTORQ6R327 1708 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 SPC24Q8NBT2 197 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 CNPY2Q9Y2B0 182 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 BRD1O95696 1058 aa17.66■□□□□ 0.42
MARK3-205ENST00000429436 TAF7Q15545 349 aaPredicted RBP17.65■□□□□ 0.42
MARK3-205ENST00000429436 LMOD2Q6P5Q4 547 aa17.65■□□□□ 0.42
MARK3-205ENST00000429436 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
MARK3-205ENST00000429436 IRX5P78411 483 aaPredicted RBP17.65■□□□□ 0.42
MARK3-205ENST00000429436 EP400NLQ6ZTU2 488 aa17.65■□□□□ 0.42
MARK3-205ENST00000429436 OSBPL3Q9H4L5 887 aa17.65■□□□□ 0.42
MARK3-205ENST00000429436 KCNQ3O43525 872 aa17.64■□□□□ 0.41
MARK3-205ENST00000429436 MBD3O95983 291 aa17.63■□□□□ 0.41
MARK3-205ENST00000429436 PI4KAP2A4QPH2 592 aa17.63■□□□□ 0.41
MARK3-205ENST00000429436 RASEFQ8IZ41 740 aa17.63■□□□□ 0.41
MARK3-205ENST00000429436 PI4KAP1Q8N8J0 262 aa17.63■□□□□ 0.41
MARK3-205ENST00000429436 DNAJC2Q99543 621 aaKnown RBP17.63■□□□□ 0.41
MARK3-205ENST00000429436 LGR6Q9HBX8 967 aa17.63■□□□□ 0.41
MARK3-205ENST00000429436 RHPN1Q8TCX5 695 aa17.62■□□□□ 0.41
MARK3-205ENST00000429436 SRCIN1Q9C0H9 1055 aa17.62■□□□□ 0.41
MARK3-205ENST00000429436 CHPF2Q9P2E5 772 aa17.62■□□□□ 0.41
MARK3-205ENST00000429436 MCM2P49736 904 aa17.62■□□□□ 0.41
MARK3-205ENST00000429436 NAA30Q147X3 362 aaPredicted RBP17.62■□□□□ 0.41
MARK3-205ENST00000429436 TCEANC2Q96MN5 208 aa17.62■□□□□ 0.41
MARK3-205ENST00000429436 PA2G4Q9UQ80 394 aaKnown RBP17.62■□□□□ 0.41
MARK3-205ENST00000429436 CCDC9Q9Y3X0 531 aaKnown RBP17.62■□□□□ 0.41
MARK3-205ENST00000429436 SETD1BQ9UPS6 1966 aaKnown RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 SOS1Q07889 1333 aaPredicted RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 PLEKHG3A1L390 1219 aa17.61■□□□□ 0.41
MARK3-205ENST00000429436 VPS37CA5D8V6 355 aaPredicted RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 RIOK3O14730 519 aaKnown RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 HCLS1P14317 486 aaPredicted RBP17.61■□□□□ 0.41
MARK3-205ENST00000429436 CASTP20810 708 aaKnown RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms