RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NAPBQ9H115 298 aa20.33■□□□□ 0.85
SMARCA4-203ENST00000429416 GLRX3O76003 335 aaKnown RBP20.33■□□□□ 0.84
SMARCA4-203ENST00000429416 IMMTQ16891 758 aaKnown RBP20.33■□□□□ 0.84
SMARCA4-203ENST00000429416 PTPRCP08575 1304 aa20.33■□□□□ 0.84
SMARCA4-203ENST00000429416 BAG6P46379 1132 aa20.33■□□□□ 0.84
SMARCA4-203ENST00000429416 RTN4Q9NQC3 1192 aaKnown RBP20.33■□□□□ 0.84
SMARCA4-203ENST00000429416 F8W031 263 aaPredicted RBP20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 MYCNP04198 464 aaPredicted RBP20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 PRIM1P49642 420 aaKnown RBP20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 UTP14AQ9BVJ6 771 aaKnown RBP20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 MX1P20591 662 aa20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 MYO1BO43795 1136 aa20.32■□□□□ 0.84
SMARCA4-203ENST00000429416 KRT18P05783 430 aaKnown RBP20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 CHMP4BP1P59074 171 aa20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 IQSEC3Q9UPP2 1182 aaPredicted RBP20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 BLOC1S2Q6QNY1 142 aa20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 TSHZ2Q9NRE2 1034 aa20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 RALGAPBQ86X10 1494 aa20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.31■□□□□ 0.845e-7■■□□□ 12.9
SMARCA4-203ENST00000429416 NYXQ9GZU5 481 aa20.31■□□□□ 0.84
SMARCA4-203ENST00000429416 WWC2Q6AWC2 1192 aa20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 SLC4A8Q2Y0W8 1093 aa20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 IBSPP21815 317 aaPredicted RBP20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 ZNF444Q8N0Y2 327 aaPredicted RBP20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 JDP2Q8WYK2 163 aa20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 FEZ1Q99689 392 aa20.3■□□□□ 0.84
SMARCA4-203ENST00000429416 CEBPZQ03701 1054 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 OGFOD1Q8N543 542 aa20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 NSFL1CQ9UNZ2 370 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 CHD1O14646 1710 aa20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 NUCB2P80303 420 aa20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 C16orf71Q8IYS4 520 aaPredicted RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 PUS7Q96PZ0 661 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 RANBP6O60518 1105 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 ZNF76P36508 570 aa20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 QTRT2Q9H974 415 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 LDHCP07864 332 aa20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 ZNF335Q9H4Z2 1342 aaPredicted RBP20.29■□□□□ 0.84
SMARCA4-203ENST00000429416 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 SDF4Q9BRK5 362 aa20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 MAST1Q9Y2H9 1570 aa20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 RBM26Q5T8P6 1007 aaKnown RBP20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 TESK2Q96S53 571 aa20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 TRIM27P14373 513 aa20.28■□□□□ 0.84
SMARCA4-203ENST00000429416 RNMTO43148 476 aaKnown RBP20.27■□□□□ 0.84
SMARCA4-203ENST00000429416 TXLNAP40222 546 aa20.27■□□□□ 0.84
SMARCA4-203ENST00000429416 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
SMARCA4-203ENST00000429416 ZC3H12CQ9C0D7 883 aaKnown RBP20.27■□□□□ 0.84
SMARCA4-203ENST00000429416 CHMP5Q9NZZ3 219 aa20.27■□□□□ 0.84
SMARCA4-203ENST00000429416 NPHP4O75161 1426 aaPredicted RBP20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 GOLIM4O00461 696 aa20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 PDCP20941 246 aa20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 ANKRD1Q15327 319 aa20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 ZHX3Q9H4I2 956 aa20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 LMBR1LQ6UX01 489 aa20.26■□□□□ 0.83
SMARCA4-203ENST00000429416 BAG3O95817 575 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 MAP3K5Q99683 1374 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 MAPKBP1O60336 1514 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 HDAC9Q9UKV0 1011 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 DNMT1P26358 1616 aaKnown RBP20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 ASXL1Q8IXJ9 1541 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 CFAP43Q8NDM7 1665 aa20.25■□□□□ 0.83
SMARCA4-203ENST00000429416 RABEP1Q15276 862 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 KRI1Q8N9T8 703 aaKnown RBP20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 NKTRP30414 1462 aaKnown RBP20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 CFAP74Q9C0B2 1584 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 RIMBP2O15034 1052 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 EPS15P42566 896 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 PHACTR3Q96KR7 559 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 SASS6Q6UVJ0 657 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 U3KPZ7 1027 aaPredicted RBP20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 STK38Q15208 465 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 KSR2Q6VAB6 950 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 C8orf58Q8NAV2 365 aa20.24■□□□□ 0.83
SMARCA4-203ENST00000429416 CNBD1Q8NA66 436 aa20.23■□□□□ 0.83
SMARCA4-203ENST00000429416 IPO7O95373 1038 aaKnown RBP20.23■□□□□ 0.83
SMARCA4-203ENST00000429416 MCM2P49736 904 aa20.23■□□□□ 0.83
SMARCA4-203ENST00000429416 KRT32Q14532 448 aa20.23■□□□□ 0.83
SMARCA4-203ENST00000429416 SKOR2Q2VWA4 1001 aaPredicted RBP20.22■□□□□ 0.83
SMARCA4-203ENST00000429416 IRS4O14654 1257 aaPredicted RBP20.22■□□□□ 0.83
SMARCA4-203ENST00000429416 PDRG1Q9NUG6 133 aa20.22■□□□□ 0.83
SMARCA4-203ENST00000429416 C20orf194Q5TEA3 1177 aa20.22■□□□□ 0.83
SMARCA4-203ENST00000429416 TRPC5Q9UL62 973 aaPredicted RBP20.22■□□□□ 0.83
SMARCA4-203ENST00000429416 CABP5Q9NP86 173 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 SEC63Q9UGP8 760 aaKnown RBP20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 HLA-DOAP06340 250 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 KRT24Q2M2I5 525 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 GRM8O00222 908 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 CDKL5O76039 1030 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 IL16Q14005 1332 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 IQCA1Q86XH1 822 aa20.21■□□□□ 0.83
SMARCA4-203ENST00000429416 SSBP05455 408 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 PZPP20742 1482 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 SAMD9Q5K651 1589 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 RXRBP28702 533 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 VEZTQ9HBM0 779 aa20.2■□□□□ 0.82
SMARCA4-203ENST00000429416 PLEKHH1Q9ULM0 1364 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms