RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 MYD88Q99836 296 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 BCL11BQ9C0K0 894 aaPredicted RBP14.86□□□□□ -0.03
LDB3-205ENST00000429277 BICDL1Q6ZP65 573 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 FAM177A1Q8N128 213 aaPredicted RBP14.86□□□□□ -0.03
LDB3-205ENST00000429277 DDX11Q96FC9 970 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 DDX19AQ9NUU7 478 aaKnown RBP14.86□□□□□ -0.03
LDB3-205ENST00000429277 LIMCH1Q9UPQ0 1083 aa14.86□□□□□ -0.03
LDB3-205ENST00000429277 CAVIN2O95810 425 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 CCDC150Q8NCX0 1101 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 PHF8Q9UPP1 1060 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 USO1O60763 962 aaKnown RBP14.85□□□□□ -0.03
LDB3-205ENST00000429277 CETN1Q12798 172 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 EVI5LQ96CN4 794 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 NAIPQ13075 1403 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 CACNA2D4Q7Z3S7 1137 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 CENPHQ9H3R5 247 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 BAG4O95429 457 aaKnown RBP14.85□□□□□ -0.03
LDB3-205ENST00000429277 AMPD3Q01432 767 aa14.85□□□□□ -0.03
LDB3-205ENST00000429277 CCDC194A0A1B0GVG4 234 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 SSRP1Q08945 709 aaKnown RBP14.84□□□□□ -0.03
LDB3-205ENST00000429277 MINDY4BA8MYZ0 360 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 KIF5BP33176 963 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 STXBP4Q6ZWJ1 553 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 LRRC27Q9C0I9 530 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 PTPN14Q15678 1187 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 TMCO3Q6UWJ1 677 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 CATIPQ7Z7H3 387 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 SSH1Q8WYL5 1049 aa14.84□□□□□ -0.03
LDB3-205ENST00000429277 UQCRHLA0A096LP55 91 aa14.83□□□□□ -0.03
LDB3-205ENST00000429277 UQCRHP07919 91 aa14.83□□□□□ -0.03
LDB3-205ENST00000429277 CCDC102AQ96A19 550 aa14.83□□□□□ -0.03
LDB3-205ENST00000429277 TOP1P11387 765 aaKnown RBP14.83□□□□□ -0.04
LDB3-205ENST00000429277 MCM10Q7L590 875 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 KIF18AQ8NI77 898 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 CDC5LQ99459 802 aaKnown RBP14.83□□□□□ -0.04
LDB3-205ENST00000429277 BOLA2Q9H3K6 86 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 ANKIB1Q9P2G1 1089 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 FAM135AQ9P2D6 1515 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 HMG20BQ9P0W2 317 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 TRMT112Q9UI30 125 aaKnown RBP14.83□□□□□ -0.04
LDB3-205ENST00000429277 CD109Q6YHK3 1445 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 SSR1P43307 286 aaKnown RBP14.83□□□□□ -0.04
LDB3-205ENST00000429277 GSDMDP57764 484 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 TRAF1Q13077 416 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 KANK3Q6NY19 840 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 IL16Q14005 1332 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
LDB3-205ENST00000429277 TTC21AQ8NDW8 1320 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 WASLO00401 505 aaPredicted RBP14.82□□□□□ -0.04
LDB3-205ENST00000429277 SPTY2D1Q68D10 685 aaPredicted RBP14.82□□□□□ -0.04
LDB3-205ENST00000429277 NCOA1Q15788 1441 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 GOLGA6L9A6NEM1 432 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 YEATS4O95619 227 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 PAFAH1B1P43034 410 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 RPGRQ92834 1020 aaKnown RBP14.82□□□□□ -0.04
LDB3-205ENST00000429277 IQGAP2Q13576 1575 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 GOLGA8AA7E2F4 631 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 GOLGA8BA8MQT2 603 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 POTEB2H3BUK9 544 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 PTCD1O75127 700 aaKnown RBP14.82□□□□□ -0.04
LDB3-205ENST00000429277 FAM114A1Q8IWE2 563 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 ECHDC1Q9NTX5 307 aa14.82□□□□□ -0.04
LDB3-205ENST00000429277 KIF14Q15058 1648 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 CCDC178Q5BJE1 867 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 SYCE3A1L190 88 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 CCDC96Q2M329 555 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 BRPF3Q9ULD4 1205 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 IFIT3O14879 490 aaKnown RBP14.81□□□□□ -0.04
LDB3-205ENST00000429277 RANBP6O60518 1105 aaKnown RBP14.81□□□□□ -0.04
LDB3-205ENST00000429277 BAG3O95817 575 aa14.81□□□□□ -0.04
LDB3-205ENST00000429277 CCDC85AQ96PX6 553 aaPredicted RBP14.81□□□□□ -0.04
LDB3-205ENST00000429277 ANAPC15P60006 121 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 CALML4Q96GE6 196 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 TCP11L1Q9NUJ3 509 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 PIK3R4Q99570 1358 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 CAMSAP2Q08AD1 1489 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 SHTN1A0MZ66 631 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 SCLT1Q96NL6 688 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 TAOK3Q9H2K8 898 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 NLRP5P59047 1200 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 NAA15Q9BXJ9 866 aaKnown RBP14.8□□□□□ -0.04
LDB3-205ENST00000429277 GCOM1H8Y6P7 765 aaPredicted RBP14.8□□□□□ -0.04
LDB3-205ENST00000429277 MYZAPP0CAP1 466 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 PDE4BQ07343 736 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 FERMT3Q86UX7 667 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 CNNM3Q8NE01 707 aa14.8□□□□□ -0.04
LDB3-205ENST00000429277 IFNL2Q8IZJ0 200 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 ADGRL1O94910 1474 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 LUZP1Q86V48 1076 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 PIBF1Q8WXW3 757 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 SPINK5Q9NQ38 1064 aaPredicted RBP14.79□□□□□ -0.04
LDB3-205ENST00000429277 SCAF11Q99590 1463 aaKnown RBP14.79□□□□□ -0.04
LDB3-205ENST00000429277 BMP15O95972 392 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 UQCRFS1P1P0C7P4 283 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 CASQ1P31415 396 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 FAM193AP78312 1265 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 XPCQ01831 940 aaPredicted RBP14.79□□□□□ -0.04
LDB3-205ENST00000429277 TAF3Q5VWG9 929 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 EXOC5O00471 708 aa14.79□□□□□ -0.04
LDB3-205ENST00000429277 FLIIQ13045 1269 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms