RNA–Protein interactions for RNA: ENST00000429199.6

PGAP3-204, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 2 BASIC

Gene PGAP3, Length 970 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-204ENST00000429199 PXDNLA1KZ92 1463 aa28.4■■■□□ 2.14
PGAP3-204ENST00000429199 BTBD11A6QL63 1104 aa28.39■■■□□ 2.14
PGAP3-204ENST00000429199 DDR1Q08345 913 aa28.39■■■□□ 2.14
PGAP3-204ENST00000429199 N4BP2Q86UW6 1770 aaPredicted RBP28.37■■■□□ 2.13
PGAP3-204ENST00000429199 RTF1Q92541 710 aaKnown RBP28.37■■■□□ 2.13
PGAP3-204ENST00000429199 PRAMEF22A3QJZ6 481 aa28.36■■■□□ 2.13
PGAP3-204ENST00000429199 HTATSF1O43719 755 aaKnown RBP28.36■■■□□ 2.13
PGAP3-204ENST00000429199 USPL1Q5W0Q7 1092 aa28.36■■■□□ 2.13
PGAP3-204ENST00000429199 FMNL2Q96PY5 1086 aa28.36■■■□□ 2.13
PGAP3-204ENST00000429199 WWC3Q9ULE0 1092 aa28.36■■■□□ 2.13
PGAP3-204ENST00000429199 KDM3BQ7LBC6 1761 aa28.35■■■□□ 2.13
PGAP3-204ENST00000429199 CANXP27824 592 aaKnown RBP28.35■■■□□ 2.13
PGAP3-204ENST00000429199 BCL2L12Q9HB09 334 aa28.35■■■□□ 2.13
PGAP3-204ENST00000429199 SCN7AQ01118 1682 aa28.35■■■□□ 2.13
PGAP3-204ENST00000429199 NFE2L2Q16236 605 aa28.34■■■□□ 2.13
PGAP3-204ENST00000429199 EIF5P55010 431 aaKnown RBP28.33■■■□□ 2.13
PGAP3-204ENST00000429199 THUMPD2Q9BTF0 503 aaKnown RBP28.33■■■□□ 2.13
PGAP3-204ENST00000429199 STARD3NLO95772 234 aa28.32■■■□□ 2.12
PGAP3-204ENST00000429199 NARFQ9UHQ1 456 aa28.32■■■□□ 2.12
PGAP3-204ENST00000429199 A1BGP04217 495 aa28.31■■■□□ 2.12
PGAP3-204ENST00000429199 TM4SF1P30408 202 aa28.31■■■□□ 2.12
PGAP3-204ENST00000429199 PRKRIP1Q9H875 184 aaPredicted RBP28.31■■■□□ 2.12
PGAP3-204ENST00000429199 MIS18AQ9NYP9 233 aa28.31■■■□□ 2.12
PGAP3-204ENST00000429199 BRCA1P38398 1863 aaKnown RBP28.31■■■□□ 2.12
PGAP3-204ENST00000429199 AFDNP55196 1824 aaKnown RBP28.3■■■□□ 2.12
PGAP3-204ENST00000429199 NRXN2Q9P2S2 1712 aa28.3■■■□□ 2.12
PGAP3-204ENST00000429199 POLRMTO00411 1230 aaKnown RBP28.3■■■□□ 2.12
PGAP3-204ENST00000429199 PARP3Q9Y6F1 533 aa28.3■■■□□ 2.12
PGAP3-204ENST00000429199 ZPR1O75312 459 aa28.29■■■□□ 2.12
PGAP3-204ENST00000429199 USP16Q9Y5T5 823 aa28.29■■■□□ 2.12
PGAP3-204ENST00000429199 PIP4K2AP48426 406 aaPredicted RBP28.28■■■□□ 2.12
PGAP3-204ENST00000429199 LAMB4A4D0S4 1761 aa28.27■■■□□ 2.12
PGAP3-204ENST00000429199 MAPK8IP3Q9UPT6 1336 aa28.27■■■□□ 2.12
PGAP3-204ENST00000429199 NFIXQ14938 502 aa28.27■■■□□ 2.12
PGAP3-204ENST00000429199 TEX13AQ9BXU3 409 aaPredicted RBP28.27■■■□□ 2.12
PGAP3-204ENST00000429199 BCORQ6W2J9 1755 aa28.27■■■□□ 2.12
PGAP3-204ENST00000429199 A0A0G2JLW4 131 aa28.26■■■□□ 2.11
PGAP3-204ENST00000429199 ZEB1P37275 1124 aaPredicted RBP28.26■■■□□ 2.11
PGAP3-204ENST00000429199 TAF7Q15545 349 aaPredicted RBP28.26■■■□□ 2.11
PGAP3-204ENST00000429199 NEFMP07197 916 aa28.25■■■□□ 2.11
PGAP3-204ENST00000429199 ZNF784Q8NCA9 323 aaPredicted RBP28.25■■■□□ 2.11
PGAP3-204ENST00000429199 GRIN3BO60391 1043 aa28.24■■■□□ 2.11
PGAP3-204ENST00000429199 DPEP1P16444 411 aa28.24■■■□□ 2.11
PGAP3-204ENST00000429199 IL6STP40189 918 aaPredicted RBP28.24■■■□□ 2.11
PGAP3-204ENST00000429199 SNRPA1P09661 255 aaKnown RBP28.23■■■□□ 2.11
PGAP3-204ENST00000429199 KCNA3P22001 575 aa28.23■■■□□ 2.11
PGAP3-204ENST00000429199 TGFB2P61812 414 aa28.23■■■□□ 2.11
PGAP3-204ENST00000429199 CCDC146Q8IYE0 955 aa28.23■■■□□ 2.11
PGAP3-204ENST00000429199 TBC1D2BQ9UPU7 963 aa28.22■■■□□ 2.11
PGAP3-204ENST00000429199 ZNF330Q9Y3S2 320 aaPredicted RBP28.22■■■□□ 2.11
PGAP3-204ENST00000429199 PNNQ9H307 717 aaKnown RBP28.21■■■□□ 2.11
PGAP3-204ENST00000429199 CARMIL3Q8ND23 1372 aa28.21■■■□□ 2.11
PGAP3-204ENST00000429199 NBPF26B4DH59 902 aa28.2■■■□□ 2.1
PGAP3-204ENST00000429199 TMPOP42166 694 aaKnown RBP28.2■■■□□ 2.1
PGAP3-204ENST00000429199 NBPF10Q6P3W6 841 aaKnown RBP28.2■■■□□ 2.1
PGAP3-204ENST00000429199 NBPF15Q8N660 670 aa28.2■■■□□ 2.1
PGAP3-204ENST00000429199 A0A087WZG4 1122 aa28.19■■■□□ 2.1
PGAP3-204ENST00000429199 CAMTA2O94983 1202 aa28.19■■■□□ 2.1
PGAP3-204ENST00000429199 RRP7AQ9Y3A4 280 aaKnown RBP28.19■■■□□ 2.1
PGAP3-204ENST00000429199 RIPK4P57078 832 aa28.18■■■□□ 2.1
PGAP3-204ENST00000429199 TBC1D9BQ66K14 1250 aa28.18■■■□□ 2.1
PGAP3-204ENST00000429199 ADAMTS8Q9UP79 889 aa28.18■■■□□ 2.1
PGAP3-204ENST00000429199 CHRNA5P30532 468 aa28.17■■■□□ 2.1
PGAP3-204ENST00000429199 EIF4A1P60842 406 aaKnown RBP28.17■■■□□ 2.1
PGAP3-204ENST00000429199 ANKRD31Q8N7Z5 1873 aa28.17■■■□□ 2.1
PGAP3-204ENST00000429199 BICDL1Q6ZP65 573 aa28.16■■■□□ 2.1
PGAP3-204ENST00000429199 DLEC1Q9Y238 1755 aa28.15■■■□□ 2.1
PGAP3-204ENST00000429199 SERPINB2P05120 415 aa28.15■■■□□ 2.1
PGAP3-204ENST00000429199 PNISRQ8TF01 805 aaKnown RBP28.15■■■□□ 2.1
PGAP3-204ENST00000429199 ADCY9O60503 1353 aa28.14■■■□□ 2.1
PGAP3-204ENST00000429199 ARFGEF1Q9Y6D6 1849 aa28.14■■■□□ 2.1
PGAP3-204ENST00000429199 GIGYF1O75420 1035 aaPredicted RBP28.14■■■□□ 2.1
PGAP3-204ENST00000429199 WDR43Q15061 677 aaKnown RBP eCLIP28.14■■■□□ 2.1
PGAP3-204ENST00000429199 DZIP3Q86Y13 1208 aaKnown RBP28.14■■■□□ 2.1
PGAP3-204ENST00000429199 BCS1LQ9Y276 419 aa28.14■■■□□ 2.1
PGAP3-204ENST00000429199 CCDC184Q52MB2 194 aa28.12■■■□□ 2.09
PGAP3-204ENST00000429199 RUNDC1Q96C34 613 aa28.12■■■□□ 2.09
PGAP3-204ENST00000429199 TRIM35Q9UPQ4 493 aa28.12■■■□□ 2.09
PGAP3-204ENST00000429199 COL11A2P13942 1736 aaPredicted RBP28.12■■■□□ 2.09
PGAP3-204ENST00000429199 NEUROD2Q15784 382 aa28.1■■■□□ 2.09
PGAP3-204ENST00000429199 TSPYL4Q9UJ04 414 aa28.09■■■□□ 2.09
PGAP3-204ENST00000429199 ATP10DQ9P241 1426 aa28.09■■■□□ 2.09
PGAP3-204ENST00000429199 CCDC24Q8N4L8 307 aa28.08■■■□□ 2.09
PGAP3-204ENST00000429199 ZNF316A6NFI3 1004 aaPredicted RBP28.07■■■□□ 2.08
PGAP3-204ENST00000429199 PRR5LQ6MZQ0 368 aa28.07■■■□□ 2.08
PGAP3-204ENST00000429199 PIM2Q9P1W9 311 aa28.07■■■□□ 2.08
PGAP3-204ENST00000429199 LMOD3Q0VAK6 560 aa28.06■■■□□ 2.08
PGAP3-204ENST00000429199 DALRD3Q5D0E6 543 aaKnown RBP28.03■■■□□ 2.08
PGAP3-204ENST00000429199 NPM2Q86SE8 214 aaKnown RBP28.03■■■□□ 2.08
PGAP3-204ENST00000429199 HLFQ16534 295 aa28.02■■■□□ 2.08
PGAP3-204ENST00000429199 KRT24Q2M2I5 525 aa28.02■■■□□ 2.08
PGAP3-204ENST00000429199 TTLL7Q6ZT98 887 aa28.01■■■□□ 2.07
PGAP3-204ENST00000429199 LRP10Q7Z4F1 713 aa28.01■■■□□ 2.07
PGAP3-204ENST00000429199 SETDB2Q96T68 719 aa28.01■■■□□ 2.07
PGAP3-204ENST00000429199 BABAM1Q9NWV8 329 aa28.01■■■□□ 2.07
PGAP3-204ENST00000429199 CHL1O00533 1208 aa28■■■□□ 2.07
PGAP3-204ENST00000429199 CLEC4GQ6UXB4 293 aa28■■■□□ 2.07
PGAP3-204ENST00000429199 ARHGAP27Q6ZUM4 889 aa28■■■□□ 2.07
PGAP3-204ENST00000429199 C2CD5Q86YS7 1000 aa28■■■□□ 2.07
PGAP3-204ENST00000429199 NGEFQ8N5V2 710 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms