RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 AMPHP49418 695 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 LRRCC1Q9C099 1032 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 TSPYL4Q9UJ04 414 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
CDH13-202ENST00000428848 UQCRHLA0A096LP55 91 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 SYCE3A1L190 88 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 UQCRHP07919 91 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 SLC4A10Q6U841 1118 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 RTF1Q92541 710 aaKnown RBP10.7□□□□□ -0.7
CDH13-202ENST00000428848 R3HCC1Q9Y3T6 440 aaKnown RBP10.7□□□□□ -0.7
CDH13-202ENST00000428848 PXDNLA1KZ92 1463 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 AOX1Q06278 1338 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 IGSF1Q8N6C5 1336 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 PNMA6EA0A0J9YXQ4 647 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 HTATSF1O43719 755 aaKnown RBP10.7□□□□□ -0.7
CDH13-202ENST00000428848 GNAI3P08754 354 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 SRCIN1Q9C0H9 1055 aa10.7□□□□□ -0.7
CDH13-202ENST00000428848 KCNA6P17658 529 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 MCCP23508 829 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 DMTNQ08495 405 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 TSHZ3Q63HK5 1081 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
CDH13-202ENST00000428848 CHD2O14647 1828 aaKnown RBP10.69□□□□□ -0.7
CDH13-202ENST00000428848 UBAP1LF5GYI3 381 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 NLRP6P59044 892 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 FLIIQ13045 1269 aa10.69□□□□□ -0.7
CDH13-202ENST00000428848 CCDC94Q9BW85 323 aaPredicted RBP10.68□□□□□ -0.7
CDH13-202ENST00000428848 HSPA4P34932 840 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 SASS6Q6UVJ0 657 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 UNC5CLQ8IV45 518 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 EYA1Q99502 592 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 STK31Q9BXU1 1019 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 NWD1Q149M9 1564 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 TMEM87AQ8NBN3 555 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 IL25Q9H293 177 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 ANO2Q9NQ90 1003 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 CCDC39Q9UFE4 941 aa10.67□□□□□ -0.7
CDH13-202ENST00000428848 RGPD8O14715 1765 aaPredicted RBP10.67□□□□□ -0.7
CDH13-202ENST00000428848 FOXD4L5Q5VV16 416 aaPredicted RBP10.66□□□□□ -0.7
CDH13-202ENST00000428848 ABTB2Q8N961 1025 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 SSH3Q8TE77 659 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 FOXD4L4Q8WXT5 416 aaPredicted RBP10.66□□□□□ -0.7
CDH13-202ENST00000428848 CHMP4AQ9BY43 222 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 USP44Q9H0E7 712 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 BABAM1Q9NWV8 329 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 MARF1Q9Y4F3 1742 aaKnown RBP10.66□□□□□ -0.7
CDH13-202ENST00000428848 PIK3C2AO00443 1686 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 XPCQ01831 940 aaPredicted RBP10.66□□□□□ -0.7
CDH13-202ENST00000428848 TSPY26PQ9H489 355 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 PHF8Q9UPP1 1060 aa10.66□□□□□ -0.7
CDH13-202ENST00000428848 LRRFIP2Q9Y608 721 aaKnown RBP10.66□□□□□ -0.7
CDH13-202ENST00000428848 RPAP1Q9BWH6 1393 aaPredicted RBP10.65□□□□□ -0.7
CDH13-202ENST00000428848 NPHP4O75161 1426 aaPredicted RBP10.65□□□□□ -0.7
CDH13-202ENST00000428848 FKBP5Q13451 457 aaPredicted RBP10.65□□□□□ -0.7
CDH13-202ENST00000428848 POLA2Q14181 598 aa10.65□□□□□ -0.7
CDH13-202ENST00000428848 KCNH5Q8NCM2 988 aa10.65□□□□□ -0.7
CDH13-202ENST00000428848 RILPL2Q969X0 211 aa10.65□□□□□ -0.7
CDH13-202ENST00000428848 TRIM6-TRIM34B2RNG4 842 aa10.65□□□□□ -0.71
CDH13-202ENST00000428848 SOX12O15370 315 aa10.65□□□□□ -0.71
CDH13-202ENST00000428848 GADD45BO75293 160 aaPredicted RBP10.65□□□□□ -0.71
CDH13-202ENST00000428848 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.71
CDH13-202ENST00000428848 TTC14Q96N46 770 aa10.65□□□□□ -0.71
CDH13-202ENST00000428848 GTPBP4Q9BZE4 634 aaKnown RBP10.65□□□□□ -0.71
CDH13-202ENST00000428848 WDR33Q9C0J8 1336 aaKnown RBP10.64□□□□□ -0.71
CDH13-202ENST00000428848 GNAT3A8MTJ3 354 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 RAB11FIP3O75154 756 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 KIF20AO95235 890 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 UVSSAQ2YD98 709 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 USP48Q86UV5 1035 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 PI4K2BQ8TCG2 481 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 UPF3BQ9BZI7 483 aaKnown RBP10.64□□□□□ -0.71
CDH13-202ENST00000428848 RAD50Q92878 1312 aa10.64□□□□□ -0.71
CDH13-202ENST00000428848 ZSCAN20P17040 1043 aaPredicted RBP10.63□□□□□ -0.71
CDH13-202ENST00000428848 RNF214Q8ND24 703 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 IL17REQ8NFR9 667 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 NAP1L2Q9ULW6 460 aaPredicted RBP10.63□□□□□ -0.71
CDH13-202ENST00000428848 ADGRL3Q9HAR2 1447 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 SGSM2O43147 1006 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 HOXC9P31274 260 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 PSME1Q06323 249 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 FAM184AQ8NB25 1140 aa10.63□□□□□ -0.71
CDH13-202ENST00000428848 PHF14O94880 888 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 IPO4Q8TEX9 1081 aaKnown RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 LSG1Q9H089 658 aaKnown RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 UBTFL1P0CB47 393 aaPredicted RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 PIP4K2BP78356 416 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 TAF7Q15545 349 aaPredicted RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 NOL8Q76FK4 1167 aaKnown RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 IL1RAPL2Q9NP60 686 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 ZHX1Q9UKY1 873 aaPredicted RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 SNX14Q9Y5W7 946 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
CDH13-202ENST00000428848 MAP3K5Q99683 1374 aa10.62□□□□□ -0.71
CDH13-202ENST00000428848 MED1Q15648 1581 aaPredicted RBP10.61□□□□□ -0.71
CDH13-202ENST00000428848 LETM1O95202 739 aaPredicted RBP10.61□□□□□ -0.71
CDH13-202ENST00000428848 PPP1R42Q7Z4L9 355 aa10.61□□□□□ -0.71
CDH13-202ENST00000428848 NUTM1Q86Y26 1132 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms