RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 SYTL4Q96C24 671 aaPredicted RBP16.16■□□□□ 0.18
HMGB3P4-201ENST00000428776 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
HMGB3P4-201ENST00000428776 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
HMGB3P4-201ENST00000428776 ZNF831Q5JPB2 1677 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 RGS12O14924 1447 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 FLIIQ13045 1269 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 VSIG10Q8N0Z9 540 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 TMEM57Q8N5G2 664 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 CCDC136Q96JN2 1154 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 HYPKQ9NX55 129 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 ASAP1Q9ULH1 1129 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 DDX19BQ9UMR2 479 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 CICQ96RK0 1608 aaPredicted RBP16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 BTAF1O14981 1849 aa16.15■□□□□ 0.18
HMGB3P4-201ENST00000428776 PTCD1O75127 700 aaKnown RBP16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 ITPRIPQ8IWB1 547 aa16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 SEPT12Q8IYM1 358 aa16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 TEX13AQ9BXU3 409 aaPredicted RBP16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 CHMP4BQ9H444 224 aaKnown RBP16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 DDX21Q9NR30 783 aaKnown RBP eCLIP16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 USP16Q9Y5T5 823 aa16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 ERBB4Q15303 1308 aa16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 TJP1Q07157 1748 aa16.14■□□□□ 0.17
HMGB3P4-201ENST00000428776 FKBP5Q13451 457 aaPredicted RBP16.13■□□□□ 0.17
HMGB3P4-201ENST00000428776 INTS3Q68E01 1043 aaKnown RBP16.13■□□□□ 0.17
HMGB3P4-201ENST00000428776 ACSBG1Q96GR2 724 aa16.13■□□□□ 0.17
HMGB3P4-201ENST00000428776 PXDNLA1KZ92 1463 aa16.12■□□□□ 0.17
HMGB3P4-201ENST00000428776 RBM6P78332 1123 aaKnown RBP16.12■□□□□ 0.17
HMGB3P4-201ENST00000428776 B4GALNT3Q6L9W6 998 aa16.12■□□□□ 0.17
HMGB3P4-201ENST00000428776 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
HMGB3P4-201ENST00000428776 PDIA6Q15084 440 aa16.11■□□□□ 0.17
HMGB3P4-201ENST00000428776 CCT4P50991 539 aaKnown RBP16.1■□□□□ 0.17
HMGB3P4-201ENST00000428776 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
HMGB3P4-201ENST00000428776 SMARCC1Q92922 1105 aaPredicted RBP16.1■□□□□ 0.17
HMGB3P4-201ENST00000428776 RBM42Q9BTD8 480 aaKnown RBP16.1■□□□□ 0.17
HMGB3P4-201ENST00000428776 ARFGEF2Q9Y6D5 1785 aa16.1■□□□□ 0.17
HMGB3P4-201ENST00000428776 COL5A3P25940 1745 aaPredicted RBP16.09■□□□□ 0.17
HMGB3P4-201ENST00000428776 ANXA1P04083 346 aa16.09■□□□□ 0.17
HMGB3P4-201ENST00000428776 LY75O60449 1722 aa16.08■□□□□ 0.17
HMGB3P4-201ENST00000428776 ZBTB7BO15156 539 aaPredicted RBP16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 KCNQ2O43526 872 aa16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 STARD3NLO95772 234 aa16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 DDX58O95786 925 aaKnown RBP16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 ZBTB40Q9NUA8 1239 aa16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 NUP188Q5SRE5 1749 aa16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 AFDNP55196 1824 aaKnown RBP16.08■□□□□ 0.16
HMGB3P4-201ENST00000428776 F6X3S4 739 aa16.07■□□□□ 0.16
HMGB3P4-201ENST00000428776 MYL6BP14649 208 aa16.07■□□□□ 0.16
HMGB3P4-201ENST00000428776 SLC4A10Q6U841 1118 aa16.07■□□□□ 0.16
HMGB3P4-201ENST00000428776 KSR2Q6VAB6 950 aa16.07■□□□□ 0.16
HMGB3P4-201ENST00000428776 RREB1Q92766 1687 aa16.07■□□□□ 0.16
HMGB3P4-201ENST00000428776 ADCY9O60503 1353 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 PALLDQ8WX93 1383 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 PI4KAP2A4QPH2 592 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 KRT27Q7Z3Y8 459 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 LRP10Q7Z4F1 713 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 DNAJC10Q8IXB1 793 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 PI4KAP1Q8N8J0 262 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 SLC4A9Q96Q91 983 aa16.06■□□□□ 0.16
HMGB3P4-201ENST00000428776 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 ATP10DQ9P241 1426 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 NBPF26B4DH59 902 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 RXRBP28702 533 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 FAM182BQ5T319 152 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 NBPF14Q5TI25 921 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 NBPF10Q6P3W6 841 aaKnown RBP16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 FAM196AQ6ZSG2 479 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 NBPF15Q8N660 670 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 XAGE3Q8WTP9 111 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 DNAAF4Q8WXU2 420 aa16.05■□□□□ 0.16
HMGB3P4-201ENST00000428776 MYH14Q7Z406 1995 aaKnown RBP16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 LOC102724428A0A0B4J2F2 783 aa16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 A1BGP04217 495 aa16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 CYP19A1P11511 503 aaPredicted RBP16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 SIK1P57059 783 aa16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 COPS6Q7L5N1 327 aa16.04■□□□□ 0.16
HMGB3P4-201ENST00000428776 AIMP1Q12904 312 aaKnown RBP16.03■□□□□ 0.16
HMGB3P4-201ENST00000428776 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
HMGB3P4-201ENST00000428776 SRCIN1Q9C0H9 1055 aa16.03■□□□□ 0.16
HMGB3P4-201ENST00000428776 MAP3K2Q9Y2U5 619 aa16.03■□□□□ 0.16
HMGB3P4-201ENST00000428776 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
HMGB3P4-201ENST00000428776 ATP6V1AP38606 617 aa16.02■□□□□ 0.16
HMGB3P4-201ENST00000428776 PIP4K2AP48426 406 aaPredicted RBP16.02■□□□□ 0.16
HMGB3P4-201ENST00000428776 RIC3Q7Z5B4 369 aa16.02■□□□□ 0.16
HMGB3P4-201ENST00000428776 RGS17Q9UGC6 210 aaPredicted RBP16.02■□□□□ 0.16
HMGB3P4-201ENST00000428776 NUP98P52948 1817 aa16.02■□□□□ 0.16
HMGB3P4-201ENST00000428776 ANKRD36CQ5JPF3 1778 aa16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 ALDH1L1O75891 902 aa16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 BEND3Q5T5X7 828 aa16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 CENPQQ7L2Z9 268 aaPredicted RBP16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 RWDD1Q9H446 243 aaPredicted RBP16.01■□□□□ 0.15
HMGB3P4-201ENST00000428776 IBTKQ9P2D0 1353 aaPredicted RBP16■□□□□ 0.15
HMGB3P4-201ENST00000428776 KDM2BQ8NHM5 1336 aa16■□□□□ 0.15
HMGB3P4-201ENST00000428776 GNAI3P08754 354 aa16■□□□□ 0.15
HMGB3P4-201ENST00000428776 PTF1AQ7RTS3 328 aa16■□□□□ 0.15
HMGB3P4-201ENST00000428776 LINS1Q8NG48 757 aa16■□□□□ 0.15
HMGB3P4-201ENST00000428776 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
HMGB3P4-201ENST00000428776 METTL22Q9BUU2 404 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms