RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 VSIG10Q8N0Z9 540 aa20.89■□□□□ 0.93
SEC13-210ENST00000428626 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.93
SEC13-210ENST00000428626 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.93
SEC13-210ENST00000428626 PPP2R1AP30153 589 aa20.88■□□□□ 0.93
SEC13-210ENST00000428626 PRKAR2BP31323 418 aa20.88■□□□□ 0.93
SEC13-210ENST00000428626 GPBP1L1Q9HC44 474 aaPredicted RBP20.88■□□□□ 0.93
SEC13-210ENST00000428626 NARFQ9UHQ1 456 aa20.88■□□□□ 0.93
SEC13-210ENST00000428626 AFDNP55196 1824 aaKnown RBP20.88■□□□□ 0.93
SEC13-210ENST00000428626 CEMIPQ8WUJ3 1361 aa20.87■□□□□ 0.93
SEC13-210ENST00000428626 ZPR1O75312 459 aa20.87■□□□□ 0.93
SEC13-210ENST00000428626 FCHSD2O94868 740 aa20.87■□□□□ 0.93
SEC13-210ENST00000428626 CANXP27824 592 aaKnown RBP20.87■□□□□ 0.93
SEC13-210ENST00000428626 CHRNA5P30532 468 aa20.87■□□□□ 0.93
SEC13-210ENST00000428626 NFIXQ14938 502 aa20.87■□□□□ 0.93
SEC13-210ENST00000428626 ARFGEF1Q9Y6D6 1849 aa20.86■□□□□ 0.93
SEC13-210ENST00000428626 KCNQ3O43525 872 aa20.86■□□□□ 0.93
SEC13-210ENST00000428626 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
SEC13-210ENST00000428626 CEP350Q5VT06 3117 aa20.85■□□□□ 0.93
SEC13-210ENST00000428626 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
SEC13-210ENST00000428626 TEFQ10587 303 aa20.85■□□□□ 0.93
SEC13-210ENST00000428626 ARHGAP27Q6ZUM4 889 aa20.85■□□□□ 0.93
SEC13-210ENST00000428626 HEG1Q9ULI3 1381 aa20.85■□□□□ 0.93
SEC13-210ENST00000428626 EIF5P55010 431 aaKnown RBP20.84■□□□□ 0.93
SEC13-210ENST00000428626 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
SEC13-210ENST00000428626 CFAP53Q96M91 514 aa20.84■□□□□ 0.93
SEC13-210ENST00000428626 PIM2Q9P1W9 311 aa20.83■□□□□ 0.93
SEC13-210ENST00000428626 KIF3CO14782 793 aa20.82■□□□□ 0.92
SEC13-210ENST00000428626 U2AF1L5P0DN76 240 aaPredicted RBP20.81■□□□□ 0.92
SEC13-210ENST00000428626 U2AF1Q01081 240 aaKnown RBP eCLIP20.81■□□□□ 0.92
SEC13-210ENST00000428626 CARMIL3Q8ND23 1372 aa20.81■□□□□ 0.92
SEC13-210ENST00000428626 STARD3NLO95772 234 aa20.8■□□□□ 0.92
SEC13-210ENST00000428626 DALRD3Q5D0E6 543 aaKnown RBP20.8■□□□□ 0.92
SEC13-210ENST00000428626 A1BGP04217 495 aa20.79■□□□□ 0.92
SEC13-210ENST00000428626 SERPINB2P05120 415 aa20.79■□□□□ 0.92
SEC13-210ENST00000428626 MCM10Q7L590 875 aa20.79■□□□□ 0.92
SEC13-210ENST00000428626 NUDCQ9Y266 331 aa20.79■□□□□ 0.92
SEC13-210ENST00000428626 SCN7AQ01118 1682 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 PRAMEF22A3QJZ6 481 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 BTBD11A6QL63 1104 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 DCTN1Q14203 1278 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 BICDL1Q6ZP65 573 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 FMNL2Q96PY5 1086 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 TBC1D2BQ9UPU7 963 aa20.78■□□□□ 0.92
SEC13-210ENST00000428626 C9orf131Q5VYM1 1079 aa20.77■□□□□ 0.92
SEC13-210ENST00000428626 TBC1D9BQ66K14 1250 aa20.77■□□□□ 0.92
SEC13-210ENST00000428626 USP16Q9Y5T5 823 aa20.77■□□□□ 0.92
SEC13-210ENST00000428626 DLEC1Q9Y238 1755 aa20.77■□□□□ 0.91
SEC13-210ENST00000428626 SBF1O95248 1867 aa20.76■□□□□ 0.91
SEC13-210ENST00000428626 ANKRD31Q8N7Z5 1873 aa20.76■□□□□ 0.91
SEC13-210ENST00000428626 PIP4K2AP48426 406 aaPredicted RBP20.76■□□□□ 0.91
SEC13-210ENST00000428626 TEX13AQ9BXU3 409 aaPredicted RBP20.76■□□□□ 0.91
SEC13-210ENST00000428626 ZNF330Q9Y3S2 320 aaPredicted RBP20.76■□□□□ 0.91
SEC13-210ENST00000428626 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
SEC13-210ENST00000428626 NMRK2Q9NPI5 230 aa20.75■□□□□ 0.91
SEC13-210ENST00000428626 A0A087WZG4 1122 aa20.74■□□□□ 0.91
SEC13-210ENST00000428626 PRELPP51888 382 aa20.73■□□□□ 0.91
SEC13-210ENST00000428626 CCDC24Q8N4L8 307 aa20.73■□□□□ 0.91
SEC13-210ENST00000428626 CAMTA2O94983 1202 aa20.72■□□□□ 0.91
SEC13-210ENST00000428626 RASSF7Q02833 373 aa20.72■□□□□ 0.91
SEC13-210ENST00000428626 BCORQ6W2J9 1755 aa20.72■□□□□ 0.91
SEC13-210ENST00000428626 DLG5Q8TDM6 1919 aa20.71■□□□□ 0.91
SEC13-210ENST00000428626 HSPA6P17066 643 aa20.71■□□□□ 0.91
SEC13-210ENST00000428626 C2CD5Q86YS7 1000 aa20.71■□□□□ 0.91
SEC13-210ENST00000428626 RTF1Q92541 710 aaKnown RBP20.71■□□□□ 0.91
SEC13-210ENST00000428626 RNF181Q9P0P0 153 aa20.71■□□□□ 0.91
SEC13-210ENST00000428626 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
SEC13-210ENST00000428626 PRR5LQ6MZQ0 368 aa20.7■□□□□ 0.9
SEC13-210ENST00000428626 PLEKHF1Q96S99 279 aa20.69■□□□□ 0.9
SEC13-210ENST00000428626 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
SEC13-210ENST00000428626 NBPF26B4DH59 902 aa20.68■□□□□ 0.9
SEC13-210ENST00000428626 HTATSF1O43719 755 aaKnown RBP20.68■□□□□ 0.9
SEC13-210ENST00000428626 NBPF10Q6P3W6 841 aaKnown RBP20.68■□□□□ 0.9
SEC13-210ENST00000428626 DZIP3Q86Y13 1208 aaKnown RBP20.68■□□□□ 0.9
SEC13-210ENST00000428626 NBPF15Q8N660 670 aa20.68■□□□□ 0.9
SEC13-210ENST00000428626 TTLL6Q8N841 843 aa20.68■□□□□ 0.9
SEC13-210ENST00000428626 SNRPA1P09661 255 aaKnown RBP20.67■□□□□ 0.9
SEC13-210ENST00000428626 H0YIN7 160 aa20.66■□□□□ 0.9
SEC13-210ENST00000428626 NFKBIEO00221 500 aa20.65■□□□□ 0.9
SEC13-210ENST00000428626 TOMM70O94826 608 aa20.65■□□□□ 0.9
SEC13-210ENST00000428626 TAF7Q15545 349 aaPredicted RBP20.65■□□□□ 0.9
SEC13-210ENST00000428626 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
SEC13-210ENST00000428626 BRIP1Q9BX63 1249 aa20.65■□□□□ 0.9
SEC13-210ENST00000428626 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.9
SEC13-210ENST00000428626 SETDB2Q96T68 719 aa20.64■□□□□ 0.89
SEC13-210ENST00000428626 KDM3BQ7LBC6 1761 aa20.64■□□□□ 0.89
SEC13-210ENST00000428626 CNBD1Q8NA66 436 aa20.62■□□□□ 0.89
SEC13-210ENST00000428626 ZNF622Q969S3 477 aaKnown RBP eCLIP20.62■□□□□ 0.89
SEC13-210ENST00000428626 SLX4Q8IY92 1834 aa20.62■□□□□ 0.89
SEC13-210ENST00000428626 LAMB4A4D0S4 1761 aa20.62■□□□□ 0.89
SEC13-210ENST00000428626 PDE6BP35913 854 aa20.61■□□□□ 0.89
SEC13-210ENST00000428626 NFE2L2Q16236 605 aa20.61■□□□□ 0.89
SEC13-210ENST00000428626 NPM2Q86SE8 214 aaKnown RBP20.61■□□□□ 0.89
SEC13-210ENST00000428626 RRAGCQ9HB90 399 aa20.61■□□□□ 0.89
SEC13-210ENST00000428626 ZNF219Q9P2Y4 722 aaPredicted RBP20.61■□□□□ 0.89
SEC13-210ENST00000428626 FER1L6Q2WGJ9 1857 aa20.6■□□□□ 0.89
SEC13-210ENST00000428626 C21orf2O43822 256 aa20.6■□□□□ 0.89
SEC13-210ENST00000428626 LMNB1P20700 586 aa20.6■□□□□ 0.89
SEC13-210ENST00000428626 CACNA1SQ13698 1873 aa20.6■□□□□ 0.89
SEC13-210ENST00000428626 KDM2BQ8NHM5 1336 aa20.59■□□□□ 0.89
SEC13-210ENST00000428626 TIAM2Q8IVF5 1701 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms