RNA–Protein interactions for RNA: ENST00000427779.5

PSMD4-203, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 3

Gene PSMD4, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-203ENST00000427779 SOS1Q07889 1333 aaPredicted RBP23.05■■□□□ 1.28
PSMD4-203ENST00000427779 NRXN2Q9P2S2 1712 aa23.02■■□□□ 1.28
PSMD4-203ENST00000427779 DLEC1Q9Y238 1755 aa23.02■■□□□ 1.28
PSMD4-203ENST00000427779 NARFQ9UHQ1 456 aa23.02■■□□□ 1.28
PSMD4-203ENST00000427779 ZC3H4Q9UPT8 1303 aaKnown RBP23.02■■□□□ 1.28
PSMD4-203ENST00000427779 COL15A1P39059 1388 aa23.01■■□□□ 1.27
PSMD4-203ENST00000427779 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
PSMD4-203ENST00000427779 RNMTO43148 476 aaKnown RBP23■■□□□ 1.27
PSMD4-203ENST00000427779 LGR6Q9HBX8 967 aa23■■□□□ 1.27
PSMD4-203ENST00000427779 NFIXQ14938 502 aa22.99■■□□□ 1.27
PSMD4-203ENST00000427779 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
PSMD4-203ENST00000427779 KLRG1Q96E93 195 aa22.99■■□□□ 1.27
PSMD4-203ENST00000427779 RRAGCQ9HB90 399 aa22.99■■□□□ 1.27
PSMD4-203ENST00000427779 SLC39A6Q13433 755 aa22.98■■□□□ 1.27
PSMD4-203ENST00000427779 ZBTB1Q9Y2K1 713 aa22.98■■□□□ 1.27
PSMD4-203ENST00000427779 UBR2Q8IWV8 1755 aa22.98■■□□□ 1.27
PSMD4-203ENST00000427779 HMOX1P09601 288 aa22.97■■□□□ 1.27
PSMD4-203ENST00000427779 AMER1Q5JTC6 1135 aaPredicted RBP22.97■■□□□ 1.27
PSMD4-203ENST00000427779 SMC1BQ8NDV3 1235 aa22.96■■□□□ 1.27
PSMD4-203ENST00000427779 SERPINB2P05120 415 aa22.95■■□□□ 1.26
PSMD4-203ENST00000427779 LMNB1P20700 586 aa22.95■■□□□ 1.26
PSMD4-203ENST00000427779 RASSF7Q02833 373 aa22.95■■□□□ 1.26
PSMD4-203ENST00000427779 CCDC88AQ3V6T2 1871 aa22.95■■□□□ 1.26
PSMD4-203ENST00000427779 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
PSMD4-203ENST00000427779 MTHFSDQ2M296 383 aaKnown RBP22.94■■□□□ 1.26
PSMD4-203ENST00000427779 TTLL6Q8N841 843 aa22.94■■□□□ 1.26
PSMD4-203ENST00000427779 JMYQ8N9B5 988 aa22.94■■□□□ 1.26
PSMD4-203ENST00000427779 HTRA3P83110 453 aa22.93■■□□□ 1.26
PSMD4-203ENST00000427779 TTC5Q8N0Z6 440 aa22.93■■□□□ 1.26
PSMD4-203ENST00000427779 BCL2L12Q9HB09 334 aa22.93■■□□□ 1.26
PSMD4-203ENST00000427779 A0A087WZG4 1122 aa22.92■■□□□ 1.26
PSMD4-203ENST00000427779 DIAPH1O60610 1272 aaKnown RBP22.92■■□□□ 1.26
PSMD4-203ENST00000427779 STARD3NLO95772 234 aa22.92■■□□□ 1.26
PSMD4-203ENST00000427779 CANXP27824 592 aaKnown RBP22.92■■□□□ 1.26
PSMD4-203ENST00000427779 C2CD5Q86YS7 1000 aa22.92■■□□□ 1.26
PSMD4-203ENST00000427779 GLTPD2A6NH11 291 aa22.91■■□□□ 1.26
PSMD4-203ENST00000427779 H0YIN7 160 aa22.91■■□□□ 1.26
PSMD4-203ENST00000427779 VEGFAP15692 232 aaPredicted RBP22.9■■□□□ 1.26
PSMD4-203ENST00000427779 PDZRN3Q9UPQ7 1066 aa22.89■■□□□ 1.25
PSMD4-203ENST00000427779 SCN7AQ01118 1682 aa22.89■■□□□ 1.25
PSMD4-203ENST00000427779 EIF5P55010 431 aaKnown RBP22.88■■□□□ 1.25
PSMD4-203ENST00000427779 CARMIL3Q8ND23 1372 aa22.88■■□□□ 1.25
PSMD4-203ENST00000427779 ANKRD31Q8N7Z5 1873 aa22.88■■□□□ 1.25
PSMD4-203ENST00000427779 KIF7Q2M1P5 1343 aa22.87■■□□□ 1.25
PSMD4-203ENST00000427779 TEFQ10587 303 aa22.87■■□□□ 1.25
PSMD4-203ENST00000427779 BICDL1Q6ZP65 573 aa22.87■■□□□ 1.25
PSMD4-203ENST00000427779 TEX13AQ9BXU3 409 aaPredicted RBP22.87■■□□□ 1.25
PSMD4-203ENST00000427779 CCER1Q8TC90 406 aaPredicted RBP22.86■■□□□ 1.25
PSMD4-203ENST00000427779 DICER1Q9UPY3 1922 aaKnown RBP22.86■■□□□ 1.25
PSMD4-203ENST00000427779 SIPA1L3O60292 1781 aaPredicted RBP22.86■■□□□ 1.25
PSMD4-203ENST00000427779 NFKBIEO00221 500 aa22.85■■□□□ 1.25
PSMD4-203ENST00000427779 PDE6BP35913 854 aa22.85■■□□□ 1.25
PSMD4-203ENST00000427779 PRELPP51888 382 aa22.85■■□□□ 1.25
PSMD4-203ENST00000427779 HEG1Q9ULI3 1381 aa22.85■■□□□ 1.25
PSMD4-203ENST00000427779 CC2D1BQ5T0F9 858 aaKnown RBP22.84■■□□□ 1.25
PSMD4-203ENST00000427779 DPY19L2Q6NUT2 758 aa22.84■■□□□ 1.25
PSMD4-203ENST00000427779 ZNF790Q6PG37 636 aa22.84■■□□□ 1.25
PSMD4-203ENST00000427779 NPM2Q86SE8 214 aaKnown RBP22.84■■□□□ 1.25
PSMD4-203ENST00000427779 GAS2L2Q8NHY3 880 aa22.84■■□□□ 1.25
PSMD4-203ENST00000427779 FER1L6Q2WGJ9 1857 aa22.83■■□□□ 1.25
PSMD4-203ENST00000427779 COL11A2P13942 1736 aaPredicted RBP22.83■■□□□ 1.25
PSMD4-203ENST00000427779 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
PSMD4-203ENST00000427779 TBC1D9BQ66K14 1250 aa22.83■■□□□ 1.25
PSMD4-203ENST00000427779 ZNF622Q969S3 477 aaKnown RBP eCLIP22.83■■□□□ 1.252e-11■□□□□ 8.7
PSMD4-203ENST00000427779 ZNF496Q96IT1 587 aaPredicted RBP22.83■■□□□ 1.25
PSMD4-203ENST00000427779 BRIP1Q9BX63 1249 aa22.83■■□□□ 1.25
PSMD4-203ENST00000427779 PER1O15534 1290 aaPredicted RBP22.82■■□□□ 1.24
PSMD4-203ENST00000427779 IL6STP40189 918 aaPredicted RBP22.82■■□□□ 1.24
PSMD4-203ENST00000427779 ZNF330Q9Y3S2 320 aaPredicted RBP22.82■■□□□ 1.24
PSMD4-203ENST00000427779 COL3A1P02461 1466 aaPredicted RBP22.81■■□□□ 1.24
PSMD4-203ENST00000427779 U2SURPO15042 1029 aaKnown RBP22.81■■□□□ 1.24
PSMD4-203ENST00000427779 COL13A1Q5TAT6 717 aaPredicted RBP22.81■■□□□ 1.24
PSMD4-203ENST00000427779 PCNTO95613 3336 aa22.81■■□□□ 1.24
PSMD4-203ENST00000427779 PRR5LQ6MZQ0 368 aa22.8■■□□□ 1.24
PSMD4-203ENST00000427779 FMNL2Q96PY5 1086 aa22.8■■□□□ 1.24
PSMD4-203ENST00000427779 CACNA1SQ13698 1873 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 NPHP1O15259 732 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 C21orf2O43822 256 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 ERFEQ4G0M1 354 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 IL17REQ8NFR9 667 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 TBC1D2BQ9UPU7 963 aa22.79■■□□□ 1.24
PSMD4-203ENST00000427779 BCORQ6W2J9 1755 aa22.78■■□□□ 1.24
PSMD4-203ENST00000427779 NPC1L1Q9UHC9 1359 aa22.78■■□□□ 1.24
PSMD4-203ENST00000427779 SETDB2Q96T68 719 aa22.78■■□□□ 1.24
PSMD4-203ENST00000427779 ARFGEF2Q9Y6D5 1785 aa22.78■■□□□ 1.24
PSMD4-203ENST00000427779 CNBD1Q8NA66 436 aa22.77■■□□□ 1.24
PSMD4-203ENST00000427779 CNKSR1Q969H4 720 aa22.77■■□□□ 1.24
PSMD4-203ENST00000427779 ZNF219Q9P2Y4 722 aaPredicted RBP22.77■■□□□ 1.24
PSMD4-203ENST00000427779 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
PSMD4-203ENST00000427779 ST5P78524 1137 aa22.76■■□□□ 1.23
PSMD4-203ENST00000427779 SOGA3Q5TF21 947 aa22.76■■□□□ 1.23
PSMD4-203ENST00000427779 TNS4Q8IZW8 715 aa22.76■■□□□ 1.23
PSMD4-203ENST00000427779 TAOK3Q9H2K8 898 aa22.76■■□□□ 1.23
PSMD4-203ENST00000427779 POTECB2RU33 542 aa22.75■■□□□ 1.23
PSMD4-203ENST00000427779 CEMIPQ8WUJ3 1361 aa22.75■■□□□ 1.23
PSMD4-203ENST00000427779 SLX4Q8IY92 1834 aa22.74■■□□□ 1.23
PSMD4-203ENST00000427779 A1BGP04217 495 aa22.74■■□□□ 1.23
PSMD4-203ENST00000427779 STYK1Q6J9G0 422 aa22.74■■□□□ 1.23
PSMD4-203ENST00000427779 CCDC24Q8N4L8 307 aa22.74■■□□□ 1.23
PSMD4-203ENST00000427779 BTBD11A6QL63 1104 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms