RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 LARP1Q6PKG0 1096 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 AACSQ86V21 672 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 CCDC12Q8WUD4 166 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 ARHGEF6Q15052 776 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 KANK4Q5T7N3 995 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 VPS36Q86VN1 386 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 BRDTQ58F21 947 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 EP400NLQ6ZTU2 488 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 CCDC85AQ96PX6 553 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 PHAXQ9H814 394 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 PTCD1O75127 700 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 IFIT5Q13325 482 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
HERC4-206ENST00000427635 LRRFIP2Q9Y608 721 aaKnown RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 PRG4Q92954 1404 aaPredicted RBP6.66□□□□□ -1.34
HERC4-206ENST00000427635 CCDC7Q96M83 1385 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 GNAT3A8MTJ3 354 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 MCM2P49736 904 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 CTCFLQ8NI51 663 aaPredicted RBP6.65□□□□□ -1.34
HERC4-206ENST00000427635 PRKAR2BP31323 418 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 NFKBIBQ15653 356 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 TWISTNBQ3B726 338 aaPredicted RBP6.65□□□□□ -1.34
HERC4-206ENST00000427635 NBPF6Q5VWK0 638 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 NBPF5PQ86XG9 351 aaPredicted RBP6.65□□□□□ -1.34
HERC4-206ENST00000427635 IQCA1Q86XH1 822 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 NBPF4Q96M43 638 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 TFCP2L1Q9NZI6 479 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 PNMA2Q9UL42 364 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 TOP2AP11388 1531 aaKnown RBP6.65□□□□□ -1.34
HERC4-206ENST00000427635 STK10O94804 968 aaKnown RBP6.65□□□□□ -1.34
HERC4-206ENST00000427635 SLC4A2P04920 1241 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 NLRP5P59047 1200 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 GPR162Q16538 588 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 SYCP3Q8IZU3 236 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 ZNF408Q9H9D4 720 aa6.65□□□□□ -1.34
HERC4-206ENST00000427635 TTC36A6NLP5 189 aa6.65□□□□□ -1.35
HERC4-206ENST00000427635 ERCC3P19447 782 aa6.65□□□□□ -1.35
HERC4-206ENST00000427635 EIF5P55010 431 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 CEBPZQ03701 1054 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 MKRN3Q13064 507 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 STK3Q13188 491 aa6.65□□□□□ -1.35
HERC4-206ENST00000427635 SPOUT1Q5T280 376 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 ZGPATQ8N5A5 531 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 SMARCC1Q92922 1105 aaPredicted RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 PUF60Q9UHX1 559 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 CCDC196A0A1B0GTZ2 297 aa6.65□□□□□ -1.35
HERC4-206ENST00000427635 ZRANB2O95218 330 aaKnown RBP eCLIP6.65□□□□□ -1.35
HERC4-206ENST00000427635 PRPF31Q8WWY3 499 aaKnown RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 RNF41Q9H4P4 317 aaPredicted RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 INCENPQ9NQS7 918 aa6.65□□□□□ -1.35
HERC4-206ENST00000427635 GPHNQ9NQX3 736 aaPredicted RBP6.65□□□□□ -1.35
HERC4-206ENST00000427635 FKBP15Q5T1M5 1219 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 KIAA1328Q86T90 577 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 SETDB2Q96T68 719 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 LNPKQ9C0E8 428 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 TSPYL1Q9H0U9 437 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 GJA3Q9Y6H8 435 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 hCG_2014768A0A024R1R8 64 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 KRT32Q14532 448 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 NAPBQ9H115 298 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 CWC15Q9P013 229 aaKnown RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 ZBTB12Q9Y330 459 aaPredicted RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 LONRF3Q496Y0 759 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 NYXQ9GZU5 481 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 SYNCQ9H7C4 482 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 RNF216Q9NWF9 866 aaPredicted RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 MROH2BQ7Z745 1585 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 GOLGA6L10A0A0M3HER8 536 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 RANBP6O60518 1105 aaKnown RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 SREK1Q8WXA9 508 aaKnown RBP6.64□□□□□ -1.35
HERC4-206ENST00000427635 FMNL2Q96PY5 1086 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 VEZTQ9HBM0 779 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 CCDC174Q6PII3 467 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 SERPINA10Q9UK55 444 aa6.64□□□□□ -1.35
HERC4-206ENST00000427635 ME1P48163 572 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 EIF6P56537 245 aaKnown RBP6.63□□□□□ -1.35
HERC4-206ENST00000427635 NFE2L2Q16236 605 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 OTUD6BQ8N6M0 293 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 RAB3IL1Q8TBN0 382 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 TMOD4Q9NZQ9 345 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 EIF3JO75822 258 aaKnown RBP6.63□□□□□ -1.35
HERC4-206ENST00000427635 PDE4BQ07343 736 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 KRT28Q7Z3Y7 464 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 MYD88Q99836 296 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 EPRSP07814 1512 aaKnown RBP6.63□□□□□ -1.35
HERC4-206ENST00000427635 CATIPQ7Z7H3 387 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 USP37Q86T82 979 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 EYA3Q99504 573 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 ZNF804AQ7Z570 1209 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 RBM28Q9NW13 759 aaKnown RBP6.63□□□□□ -1.35
HERC4-206ENST00000427635 KIF5BP33176 963 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 CCDC178Q5BJE1 867 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 CADPS2Q86UW7 1296 aa6.63□□□□□ -1.35
HERC4-206ENST00000427635 ZCRB1Q8TBF4 217 aaKnown RBP6.63□□□□□ -1.35
HERC4-206ENST00000427635 HOOK2Q96ED9 719 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 131.5 ms