RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 ZNF408Q9H9D4 720 aa15.4■□□□□ 0.06
SPG11-202ENST00000427534 SLC5A1P13866 664 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 NFE2L2Q16236 605 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 POGZQ7Z3K3 1410 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 ATP6V1AP38606 617 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 TNIP1Q15025 636 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 DRC1Q96MC2 740 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 ACBD3Q9H3P7 528 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 VEZTQ9HBM0 779 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 ANKRD18BA2A2Z9 1011 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 PPP4R3AQ6IN85 833 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 C16orf71Q8IYS4 520 aaPredicted RBP15.39■□□□□ 0.05
SPG11-202ENST00000427534 JMYQ8N9B5 988 aa15.39■□□□□ 0.05
SPG11-202ENST00000427534 MBD3O95983 291 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.38■□□□□ 0.05
SPG11-202ENST00000427534 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
SPG11-202ENST00000427534 PDCP20941 246 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 NLRP5P59047 1200 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.38■□□□□ 0.05
SPG11-202ENST00000427534 KCNH5Q8NCM2 988 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 PLB1Q6P1J6 1458 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 DPH6Q7L8W6 267 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 CUL5Q93034 780 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 GOPCQ9HD26 462 aa15.38■□□□□ 0.05
SPG11-202ENST00000427534 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 NBPF5PQ86XG9 351 aaPredicted RBP15.37■□□□□ 0.05
SPG11-202ENST00000427534 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 K7ELQ4 463 aaPredicted RBP15.37■□□□□ 0.05
SPG11-202ENST00000427534 ANKRD1Q15327 319 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 DDX46Q7L014 1031 aaKnown RBP15.37■□□□□ 0.05
SPG11-202ENST00000427534 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 CCDC61Q9Y6R9 512 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 KRT85P78386 507 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
SPG11-202ENST00000427534 AKNAD1Q5T1N1 836 aa15.37■□□□□ 0.05
SPG11-202ENST00000427534 IFIT3O14879 490 aaKnown RBP15.36■□□□□ 0.05
SPG11-202ENST00000427534 LETM1O95202 739 aaPredicted RBP15.36■□□□□ 0.05
SPG11-202ENST00000427534 SLC12A7Q9Y666 1083 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 ANAPC15P60006 121 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 ZNF354CQ86Y25 554 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 DNAJC5BQ9UF47 199 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 CDKL5O76039 1030 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 ERLIN2O94905 339 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 BIN1O00499 593 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
SPG11-202ENST00000427534 C20orf194Q5TEA3 1177 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 ANKRD24Q8TF21 1146 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 ZNF213O14771 459 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 CCDC192P0DO97 292 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 SP4Q02446 784 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 MAP3K12Q12852 859 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 ST5P78524 1137 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 LRRC2Q9BYS8 371 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 AKAP2Q9Y2D5 859 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 CFAP100Q494V2 611 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 RPAP2Q8IXW5 612 aaPredicted RBP15.35■□□□□ 0.05
SPG11-202ENST00000427534 CKAP2LQ8IYA6 745 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 GJA3Q9Y6H8 435 aa15.35■□□□□ 0.05
SPG11-202ENST00000427534 LDHAL6AQ6ZMR3 332 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 UBE3BQ7Z3V4 1068 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 CCDC178Q5BJE1 867 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 LARP1Q6PKG0 1096 aaKnown RBP15.34■□□□□ 0.05
SPG11-202ENST00000427534 KIF20AO95235 890 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 CCDC24Q8N4L8 307 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 PRKG1Q13976 671 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 AEBP1Q8IUX7 1158 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 GDPD2Q9HCC8 539 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 GOLGA6L10A6NI86 522 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 MX1P20591 662 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 HSP90AA4PQ58FG1 418 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 ZBTB21Q9ULJ3 1066 aa15.34■□□□□ 0.05
SPG11-202ENST00000427534 GOLGA8BA8MQT2 603 aa15.33■□□□□ 0.05
SPG11-202ENST00000427534 DACH1Q9UI36 760 aa15.33■□□□□ 0.05
SPG11-202ENST00000427534 GOLGA8AA7E2F4 631 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 SYCE3A1L190 88 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 TCERG1LQ5VWI1 586 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 TFCP2L1Q9NZI6 479 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 COMMD10Q9Y6G5 202 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 BICD1Q96G01 975 aa15.33■□□□□ 0.04
SPG11-202ENST00000427534 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
SPG11-202ENST00000427534 BIN2Q9UBW5 565 aaPredicted RBP15.32■□□□□ 0.04
SPG11-202ENST00000427534 MAP3K1Q13233 1512 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 MICU3Q86XE3 530 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 CTCFLQ8NI51 663 aaPredicted RBP15.32■□□□□ 0.04
SPG11-202ENST00000427534 FAM212AQ96EL1 285 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 GBP2P32456 591 aaPredicted RBP15.32■□□□□ 0.04
SPG11-202ENST00000427534 NUP62CLQ9H1M0 184 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 BCCIPQ9P287 314 aaKnown RBP eCLIP15.32■□□□□ 0.04
SPG11-202ENST00000427534 CD109Q6YHK3 1445 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 SSRP1Q08945 709 aaKnown RBP15.32■□□□□ 0.04
SPG11-202ENST00000427534 RGS22Q8NE09 1264 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 ADGRF5Q8IZF2 1346 aa15.32■□□□□ 0.04
SPG11-202ENST00000427534 WDR33Q9C0J8 1336 aaKnown RBP15.31■□□□□ 0.04
SPG11-202ENST00000427534 CUL7Q14999 1698 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 SBNO2Q9Y2G9 1366 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 HELBQ8NG08 1087 aaPredicted RBP15.31■□□□□ 0.04
SPG11-202ENST00000427534 CACNA2D4Q7Z3S7 1137 aa15.31■□□□□ 0.04
SPG11-202ENST00000427534 STX8Q9UNK0 236 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms