RNA–Protein interactions for RNA: ENST00000427167.5

SEMA3C-204, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-204ENST00000427167 FKBP8Q14318 412 aa30.21■■■□□ 2.43
SEMA3C-204ENST00000427167 FMNL2Q96PY5 1086 aa30.21■■■□□ 2.43
SEMA3C-204ENST00000427167 ZPR1O75312 459 aa30.2■■■□□ 2.43
SEMA3C-204ENST00000427167 USPL1Q5W0Q7 1092 aa30.19■■■□□ 2.42
SEMA3C-204ENST00000427167 HTATSF1O43719 755 aaKnown RBP30.18■■■□□ 2.42
SEMA3C-204ENST00000427167 PLEKHF1Q96S99 279 aa30.18■■■□□ 2.42
SEMA3C-204ENST00000427167 MYBBP1AQ9BQG0 1328 aaKnown RBP30.18■■■□□ 2.42
SEMA3C-204ENST00000427167 GRIN3BO60391 1043 aa30.17■■■□□ 2.42
SEMA3C-204ENST00000427167 MAPK8IP3Q9UPT6 1336 aa30.17■■■□□ 2.42
SEMA3C-204ENST00000427167 TEX13AQ9BXU3 409 aaPredicted RBP30.16■■■□□ 2.42
SEMA3C-204ENST00000427167 C10orf71Q711Q0 1435 aa30.15■■■□□ 2.42
SEMA3C-204ENST00000427167 PNNQ9H307 717 aaKnown RBP30.15■■■□□ 2.42
SEMA3C-204ENST00000427167 ZNF330Q9Y3S2 320 aaPredicted RBP30.15■■■□□ 2.42
SEMA3C-204ENST00000427167 DLG5Q8TDM6 1919 aa30.15■■■□□ 2.42
SEMA3C-204ENST00000427167 DDR1Q08345 913 aa30.14■■■□□ 2.42
SEMA3C-204ENST00000427167 NARFQ9UHQ1 456 aa30.14■■■□□ 2.42
SEMA3C-204ENST00000427167 KIF13BQ9NQT8 1826 aa30.14■■■□□ 2.42
SEMA3C-204ENST00000427167 NFE2L2Q16236 605 aa30.13■■■□□ 2.41
SEMA3C-204ENST00000427167 PXDNLA1KZ92 1463 aa30.12■■■□□ 2.41
SEMA3C-204ENST00000427167 ZEB1P37275 1124 aaPredicted RBP30.12■■■□□ 2.41
SEMA3C-204ENST00000427167 N4BP2Q86UW6 1770 aaPredicted RBP30.11■■■□□ 2.41
SEMA3C-204ENST00000427167 A0A0G2JLW4 131 aa30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 A1BGP04217 495 aa30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 EIF5P55010 431 aaKnown RBP30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 TAF7Q15545 349 aaPredicted RBP30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 ZNF784Q8NCA9 323 aaPredicted RBP30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 MIS18AQ9NYP9 233 aa30.1■■■□□ 2.41
SEMA3C-204ENST00000427167 PRAMEF22A3QJZ6 481 aa30.09■■■□□ 2.41
SEMA3C-204ENST00000427167 TGFB2P61812 414 aa30.09■■■□□ 2.41
SEMA3C-204ENST00000427167 KIAA1551Q9HCM1 1747 aa30.09■■■□□ 2.41
SEMA3C-204ENST00000427167 POLRMTO00411 1230 aaKnown RBP30.08■■■□□ 2.41
SEMA3C-204ENST00000427167 TM4SF1P30408 202 aa30.08■■■□□ 2.41
SEMA3C-204ENST00000427167 THUMPD2Q9BTF0 503 aaKnown RBP30.08■■■□□ 2.41
SEMA3C-204ENST00000427167 USP16Q9Y5T5 823 aa30.08■■■□□ 2.41
SEMA3C-204ENST00000427167 A0A087WZG4 1122 aa30.07■■■□□ 2.4
SEMA3C-204ENST00000427167 BCL2L12Q9HB09 334 aa30.07■■■□□ 2.4
SEMA3C-204ENST00000427167 SNRPA1P09661 255 aaKnown RBP30.06■■■□□ 2.4
SEMA3C-204ENST00000427167 DPEP1P16444 411 aa30.06■■■□□ 2.4
SEMA3C-204ENST00000427167 NFIXQ14938 502 aa30.06■■■□□ 2.4
SEMA3C-204ENST00000427167 NPM2Q86SE8 214 aaKnown RBP30.06■■■□□ 2.4
SEMA3C-204ENST00000427167 IL6STP40189 918 aaPredicted RBP30.05■■■□□ 2.4
SEMA3C-204ENST00000427167 PIP4K2AP48426 406 aaPredicted RBP30.05■■■□□ 2.4
SEMA3C-204ENST00000427167 TBC1D2BQ9UPU7 963 aa30.05■■■□□ 2.4
SEMA3C-204ENST00000427167 BICDL1Q6ZP65 573 aa30.04■■■□□ 2.4
SEMA3C-204ENST00000427167 PRKRIP1Q9H875 184 aaPredicted RBP30.03■■■□□ 2.4
SEMA3C-204ENST00000427167 BCS1LQ9Y276 419 aa30.03■■■□□ 2.4
SEMA3C-204ENST00000427167 WDR43Q15061 677 aaKnown RBP eCLIP30.02■■■□□ 2.4
SEMA3C-204ENST00000427167 CCDC146Q8IYE0 955 aa30.02■■■□□ 2.4
SEMA3C-204ENST00000427167 RIPK4P57078 832 aa30.01■■■□□ 2.39
SEMA3C-204ENST00000427167 PNISRQ8TF01 805 aaKnown RBP30.01■■■□□ 2.39
SEMA3C-204ENST00000427167 SCN7AQ01118 1682 aa30.01■■■□□ 2.39
SEMA3C-204ENST00000427167 AFDNP55196 1824 aaKnown RBP29.99■■■□□ 2.39
SEMA3C-204ENST00000427167 SERPINB2P05120 415 aa29.99■■■□□ 2.39
SEMA3C-204ENST00000427167 KDM3BQ7LBC6 1761 aa29.99■■■□□ 2.39
SEMA3C-204ENST00000427167 TBC1D9BQ66K14 1250 aa29.98■■■□□ 2.39
SEMA3C-204ENST00000427167 RRP7AQ9Y3A4 280 aaKnown RBP29.98■■■□□ 2.39
SEMA3C-204ENST00000427167 CHRNA5P30532 468 aa29.97■■■□□ 2.39
SEMA3C-204ENST00000427167 TMPOP42166 694 aaKnown RBP29.97■■■□□ 2.39
SEMA3C-204ENST00000427167 DZIP3Q86Y13 1208 aaKnown RBP29.97■■■□□ 2.39
SEMA3C-204ENST00000427167 KCNA3P22001 575 aa29.96■■■□□ 2.39
SEMA3C-204ENST00000427167 BRCA1P38398 1863 aaKnown RBP29.95■■■□□ 2.39
SEMA3C-204ENST00000427167 NEUROD2Q15784 382 aa29.95■■■□□ 2.39
SEMA3C-204ENST00000427167 PIM2Q9P1W9 311 aa29.95■■■□□ 2.39
SEMA3C-204ENST00000427167 NRXN2Q9P2S2 1712 aa29.95■■■□□ 2.38
SEMA3C-204ENST00000427167 CAMTA2O94983 1202 aa29.94■■■□□ 2.38
SEMA3C-204ENST00000427167 LAMB4A4D0S4 1761 aa29.94■■■□□ 2.38
SEMA3C-204ENST00000427167 NBPF26B4DH59 902 aa29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 EIF4A1P60842 406 aaKnown RBP29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 LMOD3Q0VAK6 560 aa29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 NBPF10Q6P3W6 841 aaKnown RBP29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 NBPF15Q8N660 670 aa29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 ADAMTS8Q9UP79 889 aa29.93■■■□□ 2.38
SEMA3C-204ENST00000427167 RUNDC1Q96C34 613 aa29.92■■■□□ 2.38
SEMA3C-204ENST00000427167 TSPYL4Q9UJ04 414 aa29.92■■■□□ 2.38
SEMA3C-204ENST00000427167 BCORQ6W2J9 1755 aa29.92■■■□□ 2.38
SEMA3C-204ENST00000427167 GIGYF1O75420 1035 aaPredicted RBP29.91■■■□□ 2.38
SEMA3C-204ENST00000427167 CARMIL3Q8ND23 1372 aa29.9■■■□□ 2.38
SEMA3C-204ENST00000427167 DALRD3Q5D0E6 543 aaKnown RBP29.9■■■□□ 2.38
SEMA3C-204ENST00000427167 ARHGAP27Q6ZUM4 889 aa29.9■■■□□ 2.38
SEMA3C-204ENST00000427167 ATP10DQ9P241 1426 aa29.88■■■□□ 2.37
SEMA3C-204ENST00000427167 CCDC24Q8N4L8 307 aa29.88■■■□□ 2.37
SEMA3C-204ENST00000427167 SETDB2Q96T68 719 aa29.88■■■□□ 2.37
SEMA3C-204ENST00000427167 NPHP1O15259 732 aa29.87■■■□□ 2.37
SEMA3C-204ENST00000427167 NGEFQ8N5V2 710 aa29.87■■■□□ 2.37
SEMA3C-204ENST00000427167 ZNF652Q9Y2D9 606 aa29.86■■■□□ 2.37
SEMA3C-204ENST00000427167 ARFGEF1Q9Y6D6 1849 aa29.85■■■□□ 2.37
SEMA3C-204ENST00000427167 C2CD5Q86YS7 1000 aa29.85■■■□□ 2.37
SEMA3C-204ENST00000427167 ADCY9O60503 1353 aa29.85■■■□□ 2.37
SEMA3C-204ENST00000427167 ZNF316A6NFI3 1004 aaPredicted RBP29.84■■■□□ 2.37
SEMA3C-204ENST00000427167 PRR5LQ6MZQ0 368 aa29.84■■■□□ 2.37
SEMA3C-204ENST00000427167 ZNF526Q8TF50 670 aaPredicted RBP29.84■■■□□ 2.37
SEMA3C-204ENST00000427167 MYL6BP14649 208 aa29.83■■■□□ 2.37
SEMA3C-204ENST00000427167 CNBD1Q8NA66 436 aa29.83■■■□□ 2.37
SEMA3C-204ENST00000427167 H0YIN7 160 aa29.82■■■□□ 2.36
SEMA3C-204ENST00000427167 CLEC4GQ6UXB4 293 aa29.82■■■□□ 2.36
SEMA3C-204ENST00000427167 TRIM35Q9UPQ4 493 aa29.82■■■□□ 2.36
SEMA3C-204ENST00000427167 LAS1LQ9Y4W2 734 aaKnown RBP29.82■■■□□ 2.36
SEMA3C-204ENST00000427167 ANKRD31Q8N7Z5 1873 aa29.8■■■□□ 2.36
SEMA3C-204ENST00000427167 DLEC1Q9Y238 1755 aa29.8■■■□□ 2.36
SEMA3C-204ENST00000427167 ST5P78524 1137 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms