RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 DDX11L8A8MPP1 907 aa23.62■■□□□ 1.37
SNX17-202ENST00000427123 RAPGEF4Q8WZA2 1011 aa23.62■■□□□ 1.37
SNX17-202ENST00000427123 ANXA1P04083 346 aa23.61■■□□□ 1.37
SNX17-202ENST00000427123 NBPF7P0C2Y1 421 aaPredicted RBP23.61■■□□□ 1.37
SNX17-202ENST00000427123 RAB3GAP1Q15042 981 aa23.61■■□□□ 1.37
SNX17-202ENST00000427123 TSHZ3Q63HK5 1081 aa23.61■■□□□ 1.37
SNX17-202ENST00000427123 NPHP3Q7Z494 1330 aa23.61■■□□□ 1.37
SNX17-202ENST00000427123 ALDH1L1O75891 902 aa23.6■■□□□ 1.37
SNX17-202ENST00000427123 SRGAP3O43295 1099 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 SURF6O75683 361 aaKnown RBP23.59■■□□□ 1.37
SNX17-202ENST00000427123 CADPS2Q86UW7 1296 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 C5P01031 1676 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 KDM6AO15550 1401 aaPredicted RBP23.59■■□□□ 1.37
SNX17-202ENST00000427123 AK9Q5TCS8 1911 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 ESYT1Q9BSJ8 1104 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 NLRP2Q9NX02 1062 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 HYPKQ9NX55 129 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 PKD1L3Q7Z443 1732 aa23.59■■□□□ 1.37
SNX17-202ENST00000427123 MEGF6O75095 1541 aa23.58■■□□□ 1.37
SNX17-202ENST00000427123 TATP17735 454 aaPredicted RBP23.58■■□□□ 1.37
SNX17-202ENST00000427123 KSR2Q6VAB6 950 aa23.58■■□□□ 1.37
SNX17-202ENST00000427123 TNPO1Q92973 898 aaKnown RBP23.58■■□□□ 1.37
SNX17-202ENST00000427123 MAP3K2Q9Y2U5 619 aa23.58■■□□□ 1.37
SNX17-202ENST00000427123 ST18O60284 1047 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 HSP90AB4PQ58FF6 505 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 KIF1BPQ96EK5 621 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 GBP4Q96PP9 640 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.57■■□□□ 1.365e-9■□□□□ 8.6
SNX17-202ENST00000427123 SPG7Q9UQ90 795 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 PROSER3Q2NL68 480 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 RHPN1Q8TCX5 695 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 MRC1P22897 1456 aa23.57■■□□□ 1.36
SNX17-202ENST00000427123 TRIM6-TRIM34B2RNG4 842 aa23.56■■□□□ 1.36
SNX17-202ENST00000427123 MTX1Q13505 466 aa23.56■■□□□ 1.36
SNX17-202ENST00000427123 IL1RAPL2Q9NP60 686 aa23.56■■□□□ 1.36
SNX17-202ENST00000427123 CHMLP26374 656 aa23.55■■□□□ 1.36
SNX17-202ENST00000427123 DDX17Q92841 729 aaKnown RBP23.55■■□□□ 1.36
SNX17-202ENST00000427123 SLC52A2Q9HAB3 445 aa23.55■■□□□ 1.36
SNX17-202ENST00000427123 FOXD4L1Q9NU39 408 aa23.55■■□□□ 1.36
SNX17-202ENST00000427123 PHKG2P15735 406 aa23.55■■□□□ 1.36
SNX17-202ENST00000427123 RILPL2Q969X0 211 aa23.55■■□□□ 1.36
SNX17-202ENST00000427123 DDX21Q9NR30 783 aaKnown RBP eCLIP23.55■■□□□ 1.36
SNX17-202ENST00000427123 PRAMEF22A3QJZ6 481 aa23.54■■□□□ 1.36
SNX17-202ENST00000427123 TRAK2O60296 914 aa23.54■■□□□ 1.36
SNX17-202ENST00000427123 DDX58O95786 925 aaKnown RBP23.54■■□□□ 1.36
SNX17-202ENST00000427123 XIRP1Q702N8 1843 aaKnown RBP23.53■■□□□ 1.36
SNX17-202ENST00000427123 PTMSP20962 102 aa23.53■■□□□ 1.36
SNX17-202ENST00000427123 MCCP23508 829 aa23.53■■□□□ 1.36
SNX17-202ENST00000427123 ZNF790Q6PG37 636 aa23.53■■□□□ 1.36
SNX17-202ENST00000427123 CPDO75976 1380 aa23.53■■□□□ 1.36
SNX17-202ENST00000427123 NUTM1Q86Y26 1132 aa23.52■■□□□ 1.36
SNX17-202ENST00000427123 C9orf78Q9NZ63 289 aaPredicted RBP23.52■■□□□ 1.36
SNX17-202ENST00000427123 SPATA31A3Q5VYP0 1347 aa23.52■■□□□ 1.36
SNX17-202ENST00000427123 CSB-PGBD3P0DP91 1061 aa23.52■■□□□ 1.36
SNX17-202ENST00000427123 PARP4Q9UKK3 1724 aaKnown RBP23.52■■□□□ 1.36
SNX17-202ENST00000427123 IFNL2Q8IZJ0 200 aa23.51■■□□□ 1.35
SNX17-202ENST00000427123 LINS1Q8NG48 757 aa23.51■■□□□ 1.35
SNX17-202ENST00000427123 L1TD1Q5T7N2 865 aaKnown RBP23.5■■□□□ 1.35
SNX17-202ENST00000427123 PI4K2BQ8TCG2 481 aa23.5■■□□□ 1.35
SNX17-202ENST00000427123 USP42Q9H9J4 1324 aaKnown RBP23.5■■□□□ 1.35
SNX17-202ENST00000427123 EPB41L2O43491 1005 aaKnown RBP23.5■■□□□ 1.35
SNX17-202ENST00000427123 ANAPC15P60006 121 aa23.5■■□□□ 1.35
SNX17-202ENST00000427123 UNC5CLQ8IV45 518 aa23.5■■□□□ 1.35
SNX17-202ENST00000427123 PDIA6Q15084 440 aa23.49■■□□□ 1.35
SNX17-202ENST00000427123 CABLES1Q8TDN4 633 aa23.49■■□□□ 1.35
SNX17-202ENST00000427123 UTYO14607 1347 aa23.49■■□□□ 1.35
SNX17-202ENST00000427123 CLEC17AQ6ZS10 378 aa23.48■■□□□ 1.35
SNX17-202ENST00000427123 ANO2Q9NQ90 1003 aa23.48■■□□□ 1.35
SNX17-202ENST00000427123 GRM8O00222 908 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 SLC39A6Q13433 755 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 OS9Q13438 667 aaPredicted RBP23.47■■□□□ 1.35
SNX17-202ENST00000427123 CWF19L2Q2TBE0 894 aaKnown RBP23.47■■□□□ 1.35
SNX17-202ENST00000427123 IL17RAQ96F46 866 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 DCAF5Q96JK2 942 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 CWC22Q9HCG8 908 aaKnown RBP23.47■■□□□ 1.35
SNX17-202ENST00000427123 TTC41PQ6P2S7 1318 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 NUCB2P80303 420 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 ERC1Q8IUD2 1116 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 BRPF3Q9ULD4 1205 aa23.47■■□□□ 1.35
SNX17-202ENST00000427123 SSFA2P28290 1259 aa23.46■■□□□ 1.35
SNX17-202ENST00000427123 CHRNA2Q15822 529 aa23.46■■□□□ 1.35
SNX17-202ENST00000427123 NFATC2IPQ8NCF5 419 aa23.46■■□□□ 1.35
SNX17-202ENST00000427123 LAMB4A4D0S4 1761 aa23.46■■□□□ 1.35
SNX17-202ENST00000427123 MCM2P49736 904 aa23.45■■□□□ 1.35
SNX17-202ENST00000427123 CNTROBQ8N137 903 aa23.45■■□□□ 1.35
SNX17-202ENST00000427123 LARP1Q6PKG0 1096 aaKnown RBP23.45■■□□□ 1.34
SNX17-202ENST00000427123 SKOR2Q2VWA4 1001 aaPredicted RBP23.44■■□□□ 1.34
SNX17-202ENST00000427123 AIMP1Q12904 312 aaKnown RBP23.43■■□□□ 1.34
SNX17-202ENST00000427123 CLASRPQ8N2M8 674 aaKnown RBP23.43■■□□□ 1.34
SNX17-202ENST00000427123 FSD2A1L4K1 749 aa23.43■■□□□ 1.34
SNX17-202ENST00000427123 CYP27B1O15528 508 aa23.43■■□□□ 1.34
SNX17-202ENST00000427123 GLRX3O76003 335 aaKnown RBP23.43■■□□□ 1.34
SNX17-202ENST00000427123 RIC3Q7Z5B4 369 aa23.43■■□□□ 1.34
SNX17-202ENST00000427123 TTC5Q8N0Z6 440 aa23.43■■□□□ 1.34
SNX17-202ENST00000427123 IL27Q8NEV9 243 aa23.43■■□□□ 1.34
SNX17-202ENST00000427123 GZF1Q9H116 711 aaPredicted RBP23.43■■□□□ 1.34
SNX17-202ENST00000427123 GOLGA6L22H0YM25 854 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 NEK4P51957 841 aa23.42■■□□□ 1.34
SNX17-202ENST00000427123 SUCLG2Q96I99 432 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms