RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 TM4SF1P30408 202 aa13.79□□□□□ -0.2
HDLBP-213ENST00000427007 PIM2Q9P1W9 311 aa13.79□□□□□ -0.2
HDLBP-213ENST00000427007 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
HDLBP-213ENST00000427007 HSPA6P17066 643 aa13.78□□□□□ -0.2
HDLBP-213ENST00000427007 NRXN2Q9P2S2 1712 aa13.78□□□□□ -0.2
HDLBP-213ENST00000427007 CANXP27824 592 aaKnown RBP13.77□□□□□ -0.21
HDLBP-213ENST00000427007 DALRD3Q5D0E6 543 aaKnown RBP13.77□□□□□ -0.21
HDLBP-213ENST00000427007 CEP350Q5VT06 3117 aa13.77□□□□□ -0.21
HDLBP-213ENST00000427007 TTC5Q8N0Z6 440 aa13.77□□□□□ -0.21
HDLBP-213ENST00000427007 NARFQ9UHQ1 456 aa13.77□□□□□ -0.21
HDLBP-213ENST00000427007 NPC1L1Q9UHC9 1359 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 NFIXQ14938 502 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 C9orf131Q5VYM1 1079 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 VSIG10Q8N0Z9 540 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 DLEC1Q9Y238 1755 aa13.76□□□□□ -0.21
HDLBP-213ENST00000427007 GNAT3A8MTJ3 354 aa13.75□□□□□ -0.21
HDLBP-213ENST00000427007 TEFQ10587 303 aa13.75□□□□□ -0.21
HDLBP-213ENST00000427007 IL17REQ8NFR9 667 aa13.75□□□□□ -0.21
HDLBP-213ENST00000427007 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
HDLBP-213ENST00000427007 NMRK2Q9NPI5 230 aa13.75□□□□□ -0.21
HDLBP-213ENST00000427007 SBF1O95248 1867 aa13.74□□□□□ -0.21
HDLBP-213ENST00000427007 BICDL1Q6ZP65 573 aa13.74□□□□□ -0.21
HDLBP-213ENST00000427007 RNF181Q9P0P0 153 aa13.74□□□□□ -0.21
HDLBP-213ENST00000427007 SCN7AQ01118 1682 aa13.74□□□□□ -0.21
HDLBP-213ENST00000427007 CARMIL3Q8ND23 1372 aa13.73□□□□□ -0.21
HDLBP-213ENST00000427007 HEG1Q9ULI3 1381 aa13.73□□□□□ -0.21
HDLBP-213ENST00000427007 SERPINB2P05120 415 aa13.73□□□□□ -0.21
HDLBP-213ENST00000427007 ZNF790Q6PG37 636 aa13.73□□□□□ -0.21
HDLBP-213ENST00000427007 ZNF496Q96IT1 587 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-213ENST00000427007 ZNF330Q9Y3S2 320 aaPredicted RBP13.73□□□□□ -0.21
HDLBP-213ENST00000427007 TOMM70O94826 608 aa13.72□□□□□ -0.21
HDLBP-213ENST00000427007 STARD3NLO95772 234 aa13.72□□□□□ -0.21
HDLBP-213ENST00000427007 PRKAR2BP31323 418 aa13.72□□□□□ -0.21
HDLBP-213ENST00000427007 EIF5P55010 431 aaKnown RBP13.72□□□□□ -0.21
HDLBP-213ENST00000427007 RASSF7Q02833 373 aa13.72□□□□□ -0.21
HDLBP-213ENST00000427007 PHACTR3Q96KR7 559 aa13.71□□□□□ -0.21
HDLBP-213ENST00000427007 CFAP53Q96M91 514 aa13.71□□□□□ -0.21
HDLBP-213ENST00000427007 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
HDLBP-213ENST00000427007 ANKRD31Q8N7Z5 1873 aa13.71□□□□□ -0.21
HDLBP-213ENST00000427007 TNRC6CQ9HCJ0 1690 aaKnown RBP13.7□□□□□ -0.22
HDLBP-213ENST00000427007 KCNQ3O43525 872 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 TBC1D9BQ66K14 1250 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 C2CD5Q86YS7 1000 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 FMNL2Q96PY5 1086 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 TBC1D2BQ9UPU7 963 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 COL11A2P13942 1736 aaPredicted RBP13.7□□□□□ -0.22
HDLBP-213ENST00000427007 TIAM2Q8IVF5 1701 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 CCDC88AQ3V6T2 1871 aa13.7□□□□□ -0.22
HDLBP-213ENST00000427007 BCORQ6W2J9 1755 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 A0A087WZG4 1122 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 BTBD11A6QL63 1104 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 A1BGP04217 495 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 C16orf71Q8IYS4 520 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-213ENST00000427007 CCDC24Q8N4L8 307 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 TEX13AQ9BXU3 409 aaPredicted RBP13.69□□□□□ -0.22
HDLBP-213ENST00000427007 WDR90Q96KV7 1748 aa13.69□□□□□ -0.22
HDLBP-213ENST00000427007 KDM2BQ8NHM5 1336 aa13.68□□□□□ -0.22
HDLBP-213ENST00000427007 CACNA1SQ13698 1873 aa13.68□□□□□ -0.22
HDLBP-213ENST00000427007 APLP1P51693 650 aa13.68□□□□□ -0.22
HDLBP-213ENST00000427007 TTLL6Q8N841 843 aa13.68□□□□□ -0.22
HDLBP-213ENST00000427007 RRAGCQ9HB90 399 aa13.68□□□□□ -0.22
HDLBP-213ENST00000427007 H0YIN7 160 aa13.67□□□□□ -0.22
HDLBP-213ENST00000427007 U2AF1L5P0DN76 240 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-213ENST00000427007 PPP2R1AP30153 589 aa13.67□□□□□ -0.22
HDLBP-213ENST00000427007 IL6STP40189 918 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-213ENST00000427007 PIP4K2AP48426 406 aaPredicted RBP13.67□□□□□ -0.22
HDLBP-213ENST00000427007 PRELPP51888 382 aa13.67□□□□□ -0.22
HDLBP-213ENST00000427007 U2AF1Q01081 240 aaKnown RBP eCLIP13.67□□□□□ -0.22
HDLBP-213ENST00000427007 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
HDLBP-213ENST00000427007 PRAMEF22A3QJZ6 481 aa13.66□□□□□ -0.22
HDLBP-213ENST00000427007 PRR5LQ6MZQ0 368 aa13.66□□□□□ -0.22
HDLBP-213ENST00000427007 MCM10Q7L590 875 aa13.66□□□□□ -0.22
HDLBP-213ENST00000427007 NPM2Q86SE8 214 aaKnown RBP13.66□□□□□ -0.22
HDLBP-213ENST00000427007 RBM46Q8TBY0 533 aaKnown RBP13.66□□□□□ -0.22
HDLBP-213ENST00000427007 ZNF622Q969S3 477 aaKnown RBP eCLIP13.66□□□□□ -0.225e-8■□□□□ 8.1
HDLBP-213ENST00000427007 ZNF219Q9P2Y4 722 aaPredicted RBP13.66□□□□□ -0.22
HDLBP-213ENST00000427007 USP16Q9Y5T5 823 aa13.66□□□□□ -0.22
HDLBP-213ENST00000427007 DCTN1Q14203 1278 aa13.65□□□□□ -0.22
HDLBP-213ENST00000427007 RTF1Q92541 710 aaKnown RBP13.65□□□□□ -0.22
HDLBP-213ENST00000427007 NFKBIEO00221 500 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 NPHP1O15259 732 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 CAMTA2O94983 1202 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 LMNB1P20700 586 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 HTRA3P83110 453 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 IFFO2Q5TF58 517 aa13.64□□□□□ -0.23
HDLBP-213ENST00000427007 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
HDLBP-213ENST00000427007 C21orf2O43822 256 aa13.63□□□□□ -0.23
HDLBP-213ENST00000427007 PDE6BP35913 854 aa13.63□□□□□ -0.23
HDLBP-213ENST00000427007 SETDB2Q96T68 719 aa13.63□□□□□ -0.23
HDLBP-213ENST00000427007 BRIP1Q9BX63 1249 aa13.63□□□□□ -0.23
HDLBP-213ENST00000427007 FER1L6Q2WGJ9 1857 aa13.63□□□□□ -0.23
HDLBP-213ENST00000427007 ZC3H4Q9UPT8 1303 aaKnown RBP13.63□□□□□ -0.23
HDLBP-213ENST00000427007 DLG5Q8TDM6 1919 aa13.62□□□□□ -0.23
HDLBP-213ENST00000427007 FSTL1Q12841 308 aa13.62□□□□□ -0.23
HDLBP-213ENST00000427007 DNAJC5GQ8N7S2 189 aa13.62□□□□□ -0.23
HDLBP-213ENST00000427007 CNBD1Q8NA66 436 aa13.62□□□□□ -0.23
HDLBP-213ENST00000427007 ARFGEF2Q9Y6D5 1785 aa13.62□□□□□ -0.23
HDLBP-213ENST00000427007 LAMB4A4D0S4 1761 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms