RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 COL17A1Q9UMD9 1497 aaPredicted RBP23.14■■□□□ 1.29
HCG18-235ENST00000426882 ABCF2Q9UG63 623 aa23.14■■□□□ 1.29
HCG18-235ENST00000426882 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 CBFA2T2O43439 604 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 RHPN1Q8TCX5 695 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 UHRF1BP1Q6BDS2 1440 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 ZNF518AQ6AHZ1 1483 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 AK7Q96M32 723 aa23.13■■□□□ 1.29
HCG18-235ENST00000426882 DNMT1P26358 1616 aaKnown RBP23.12■■□□□ 1.29
HCG18-235ENST00000426882 PDE1AP54750 535 aa23.12■■□□□ 1.29
HCG18-235ENST00000426882 EIF4A2Q14240 407 aaKnown RBP23.12■■□□□ 1.29
HCG18-235ENST00000426882 VAMP4O75379 141 aa23.12■■□□□ 1.29
HCG18-235ENST00000426882 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
HCG18-235ENST00000426882 WASF1Q92558 559 aa23.12■■□□□ 1.29
HCG18-235ENST00000426882 HMGB1P09429 215 aaKnown RBP23.11■■□□□ 1.29
HCG18-235ENST00000426882 TNRQ92752 1358 aa23.11■■□□□ 1.29
HCG18-235ENST00000426882 STX6O43752 255 aa23.11■■□□□ 1.29
HCG18-235ENST00000426882 IFIT5Q13325 482 aaKnown RBP23.11■■□□□ 1.29
HCG18-235ENST00000426882 KLHL40Q2TBA0 621 aa23.11■■□□□ 1.29
HCG18-235ENST00000426882 FAM177A1Q8N128 213 aaPredicted RBP23.11■■□□□ 1.29
HCG18-235ENST00000426882 TEX14Q8IWB6 1497 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 ATP2B2Q01814 1243 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 GUCY1B3Q02153 619 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 CCAR1Q8IX12 1150 aaKnown RBP23.1■■□□□ 1.29
HCG18-235ENST00000426882 TMX3Q96JJ7 454 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 TTC21AQ8NDW8 1320 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 GJB2P29033 226 aa23.1■■□□□ 1.29
HCG18-235ENST00000426882 SMTNL1A8MU46 457 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 SETQ01105 290 aaPredicted RBP23.09■■□□□ 1.29
HCG18-235ENST00000426882 STIM1Q13586 685 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 UBE3BQ7Z3V4 1068 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 PHACTR3Q96KR7 559 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 C16orf71Q8IYS4 520 aaPredicted RBP23.09■■□□□ 1.29
HCG18-235ENST00000426882 C8orf76Q96K31 380 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 ZBTB3Q9H5J0 574 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 ZNHIT6Q9NWK9 470 aaKnown RBP23.09■■□□□ 1.29
HCG18-235ENST00000426882 USP25Q9UHP3 1055 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 WDR7Q9Y4E6 1490 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 KRT28Q7Z3Y7 464 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 ZBTB40Q9NUA8 1239 aa23.09■■□□□ 1.29
HCG18-235ENST00000426882 ATP5J2-PTCD1G3V325 749 aa23.08■■□□□ 1.29
HCG18-235ENST00000426882 BICDL1Q6ZP65 573 aa23.08■■□□□ 1.29
HCG18-235ENST00000426882 SMC5Q8IY18 1101 aa23.08■■□□□ 1.29
HCG18-235ENST00000426882 KRT18P05783 430 aaKnown RBP23.08■■□□□ 1.28
HCG18-235ENST00000426882 ERCC4Q92889 916 aaPredicted RBP23.08■■□□□ 1.28
HCG18-235ENST00000426882 SOGA3Q5TF21 947 aa23.08■■□□□ 1.28
HCG18-235ENST00000426882 CKAP2LQ8IYA6 745 aa23.08■■□□□ 1.28
HCG18-235ENST00000426882 TFIP11Q9UBB9 837 aaKnown RBP23.08■■□□□ 1.28
HCG18-235ENST00000426882 A0A1W2PP64 1363 aa23.07■■□□□ 1.28
HCG18-235ENST00000426882 IFNL2Q8IZJ0 200 aa23.07■■□□□ 1.28
HCG18-235ENST00000426882 ANKRD24Q8TF21 1146 aa23.07■■□□□ 1.28
HCG18-235ENST00000426882 CHPF2Q9P2E5 772 aa23.07■■□□□ 1.28
HCG18-235ENST00000426882 CT47A1Q5JQC4 288 aaPredicted RBP23.07■■□□□ 1.28
HCG18-235ENST00000426882 RBM27Q9P2N5 1060 aaKnown RBP23.07■■□□□ 1.28
HCG18-235ENST00000426882 NAPBQ9H115 298 aa23.07■■□□□ 1.28
HCG18-235ENST00000426882 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
HCG18-235ENST00000426882 ANO10Q9NW15 660 aa23.06■■□□□ 1.28
HCG18-235ENST00000426882 GOLIM4O00461 696 aa23.06■■□□□ 1.28
HCG18-235ENST00000426882 CFAP100Q494V2 611 aa23.06■■□□□ 1.28
HCG18-235ENST00000426882 PIBF1Q8WXW3 757 aa23.06■■□□□ 1.28
HCG18-235ENST00000426882 CCT2P78371 535 aaKnown RBP23.06■■□□□ 1.28
HCG18-235ENST00000426882 SNX21Q969T3 373 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 RIMS2Q9UQ26 1411 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 SEC24BO95487 1268 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 KRT24Q2M2I5 525 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 ATP8B2P98198 1209 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 ESYT1Q9BSJ8 1104 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 DISP1Q96F81 1524 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 ZNF213O14771 459 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 DCTPP1Q9H773 170 aa23.05■■□□□ 1.28
HCG18-235ENST00000426882 MINDY4BA8MYZ0 360 aa23.04■■□□□ 1.28
HCG18-235ENST00000426882 TRMT112Q9UI30 125 aaKnown RBP23.04■■□□□ 1.28
HCG18-235ENST00000426882 MTHFSDQ2M296 383 aaKnown RBP23.04■■□□□ 1.28
HCG18-235ENST00000426882 ADGRL2O95490 1459 aa23.04■■□□□ 1.28
HCG18-235ENST00000426882 JARID2Q92833 1246 aaPredicted RBP23.04■■□□□ 1.28
HCG18-235ENST00000426882 ABCC10Q5T3U5 1492 aa23.03■■□□□ 1.28
HCG18-235ENST00000426882 DDX19AQ9NUU7 478 aaKnown RBP23.03■■□□□ 1.28
HCG18-235ENST00000426882 CDR1P51861 262 aa23.03■■□□□ 1.28
HCG18-235ENST00000426882 NPC1L1Q9UHC9 1359 aa23.02■■□□□ 1.28
HCG18-235ENST00000426882 MAP3K12Q12852 859 aa23.02■■□□□ 1.28
HCG18-235ENST00000426882 SNRKQ9NRH2 765 aa23.02■■□□□ 1.28
HCG18-235ENST00000426882 GOLGA8BA8MQT2 603 aa23.02■■□□□ 1.28
HCG18-235ENST00000426882 SFPQP23246 707 aaKnown RBP eCLIP23.02■■□□□ 1.27
HCG18-235ENST00000426882 ANKRD13DQ6ZTN6 518 aa23.02■■□□□ 1.27
HCG18-235ENST00000426882 CEP131Q9UPN4 1083 aa23.02■■□□□ 1.27
HCG18-235ENST00000426882 SNRPA1P09661 255 aaKnown RBP23.01■■□□□ 1.27
HCG18-235ENST00000426882 HSP90AB3PQ58FF7 597 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 CEP85Q6P2H3 762 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 NEK1Q96PY6 1258 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 GPTP24298 496 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 CCDC82Q8N4S0 544 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 NPATQ14207 1427 aa23.01■■□□□ 1.27
HCG18-235ENST00000426882 CWC25Q9NXE8 425 aaPredicted RBP23.01■■□□□ 1.27
HCG18-235ENST00000426882 ZSCAN23Q3MJ62 389 aa23■■□□□ 1.27
HCG18-235ENST00000426882 ZHX3Q9H4I2 956 aa23■■□□□ 1.27
HCG18-235ENST00000426882 ANKRD18BA2A2Z9 1011 aa23■■□□□ 1.27
HCG18-235ENST00000426882 UBE2HP62256 183 aa23■■□□□ 1.27
HCG18-235ENST00000426882 CCDC196A0A1B0GTZ2 297 aa23■■□□□ 1.27
HCG18-235ENST00000426882 ANAPC15P60006 121 aa23■■□□□ 1.27
HCG18-235ENST00000426882 HMG20BQ9P0W2 317 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms