RNA–Protein interactions for RNA: ENST00000425819.6

SCRN1-205, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-205ENST00000425819 VSIG10Q8N0Z9 540 aa20.13■□□□□ 0.81
SCRN1-205ENST00000425819 SMARCC1Q92922 1105 aaPredicted RBP20.13■□□□□ 0.81
SCRN1-205ENST00000425819 SLC4A9Q96Q91 983 aa20.13■□□□□ 0.81
SCRN1-205ENST00000425819 CRBNQ96SW2 442 aa20.13■□□□□ 0.81
SCRN1-205ENST00000425819 DBF4Q9UBU7 674 aaPredicted RBP20.13■□□□□ 0.81
SCRN1-205ENST00000425819 PALLDQ8WX93 1383 aa20.13■□□□□ 0.81
SCRN1-205ENST00000425819 NHSQ6T4R5 1651 aa20.13■□□□□ 0.81
SCRN1-205ENST00000425819 RLBP1P12271 317 aa20.12■□□□□ 0.81
SCRN1-205ENST00000425819 PROSER3Q2NL68 480 aa20.12■□□□□ 0.81
SCRN1-205ENST00000425819 DNAJC10Q8IXB1 793 aa20.12■□□□□ 0.81
SCRN1-205ENST00000425819 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
SCRN1-205ENST00000425819 DZIP1LQ8IYY4 767 aaKnown RBP20.12■□□□□ 0.81
SCRN1-205ENST00000425819 ARHGAP45Q92619 1136 aa20.12■□□□□ 0.81
SCRN1-205ENST00000425819 PHAXQ9H814 394 aaKnown RBP20.12■□□□□ 0.81
SCRN1-205ENST00000425819 PIP4K2AP48426 406 aaPredicted RBP20.11■□□□□ 0.81
SCRN1-205ENST00000425819 FLIIQ13045 1269 aa20.11■□□□□ 0.81
SCRN1-205ENST00000425819 PDIA6Q15084 440 aa20.11■□□□□ 0.81
SCRN1-205ENST00000425819 EXOC6Q8TAG9 804 aa20.11■□□□□ 0.81
SCRN1-205ENST00000425819 API5Q9BZZ5 524 aaKnown RBP20.11■□□□□ 0.81
SCRN1-205ENST00000425819 PTPRCP08575 1304 aa20.11■□□□□ 0.81
SCRN1-205ENST00000425819 MS4A1P11836 297 aa20.1■□□□□ 0.81
SCRN1-205ENST00000425819 MYL6BP14649 208 aa20.1■□□□□ 0.81
SCRN1-205ENST00000425819 TEX13AQ9BXU3 409 aaPredicted RBP20.1■□□□□ 0.81
SCRN1-205ENST00000425819 DDX21Q9NR30 783 aaKnown RBP eCLIP20.1■□□□□ 0.81
SCRN1-205ENST00000425819 LOC102724428A0A0B4J2F2 783 aa20.09■□□□□ 0.81
SCRN1-205ENST00000425819 SIK1P57059 783 aa20.09■□□□□ 0.81
SCRN1-205ENST00000425819 BCL11BQ9C0K0 894 aaPredicted RBP20.09■□□□□ 0.81
SCRN1-205ENST00000425819 COG6Q9Y2V7 657 aa20.09■□□□□ 0.81
SCRN1-205ENST00000425819 LAMB4A4D0S4 1761 aa20.09■□□□□ 0.81
SCRN1-205ENST00000425819 TRIM37O94972 964 aa20.08■□□□□ 0.81
SCRN1-205ENST00000425819 A1BGP04217 495 aa20.08■□□□□ 0.81
SCRN1-205ENST00000425819 ATP6V1AP38606 617 aa20.08■□□□□ 0.81
SCRN1-205ENST00000425819 FKBP5Q13451 457 aaPredicted RBP20.08■□□□□ 0.81
SCRN1-205ENST00000425819 HYPKQ9NX55 129 aa20.08■□□□□ 0.81
SCRN1-205ENST00000425819 BTAF1O14981 1849 aa20.07■□□□□ 0.8
SCRN1-205ENST00000425819 SBF2Q86WG5 1849 aa20.07■□□□□ 0.8
SCRN1-205ENST00000425819 STARD3NLO95772 234 aa20.07■□□□□ 0.8
SCRN1-205ENST00000425819 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
SCRN1-205ENST00000425819 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 F6X3S4 739 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 NBPF14Q5TI25 921 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
SCRN1-205ENST00000425819 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 ABCC4O15439 1325 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 ERBB4Q15303 1308 aa20.06■□□□□ 0.8
SCRN1-205ENST00000425819 CYP19A1P11511 503 aaPredicted RBP20.05■□□□□ 0.8
SCRN1-205ENST00000425819 AIMP1Q12904 312 aaKnown RBP20.05■□□□□ 0.8
SCRN1-205ENST00000425819 ITPK1Q13572 414 aa20.05■□□□□ 0.8
SCRN1-205ENST00000425819 ITPRIPQ8IWB1 547 aa20.05■□□□□ 0.8
SCRN1-205ENST00000425819 MVPQ14764 893 aaKnown RBP20.04■□□□□ 0.8
SCRN1-205ENST00000425819 ERICH6BQ5W0A0 696 aa20.04■□□□□ 0.8
SCRN1-205ENST00000425819 LRP10Q7Z4F1 713 aa20.04■□□□□ 0.8
SCRN1-205ENST00000425819 TJP1Q07157 1748 aa20.04■□□□□ 0.8
SCRN1-205ENST00000425819 KCNQ4P56696 695 aa20.04■□□□□ 0.8
SCRN1-205ENST00000425819 XAGE3Q8WTP9 111 aa20.04■□□□□ 0.8
SCRN1-205ENST00000425819 SLC4A10Q6U841 1118 aa20.03■□□□□ 0.8
SCRN1-205ENST00000425819 COPS6Q7L5N1 327 aa20.03■□□□□ 0.8
SCRN1-205ENST00000425819 CACNA1FO60840 1977 aa20.02■□□□□ 0.79
SCRN1-205ENST00000425819 PI4KAP2A4QPH2 592 aa20.01■□□□□ 0.79
SCRN1-205ENST00000425819 PI4KAP1Q8N8J0 262 aa20.01■□□□□ 0.79
SCRN1-205ENST00000425819 CCNL1Q9UK58 526 aaPredicted RBP20.01■□□□□ 0.79
SCRN1-205ENST00000425819 ZNF330Q9Y3S2 320 aaPredicted RBP20.01■□□□□ 0.79
SCRN1-205ENST00000425819 DDX58O95786 925 aaKnown RBP20■□□□□ 0.79
SCRN1-205ENST00000425819 ZBTB1Q9Y2K1 713 aa20■□□□□ 0.79
SCRN1-205ENST00000425819 ADCY9O60503 1353 aa20■□□□□ 0.79
SCRN1-205ENST00000425819 CRKLP46109 303 aaKnown RBP20■□□□□ 0.79
SCRN1-205ENST00000425819 INTS3Q68E01 1043 aaKnown RBP20■□□□□ 0.79
SCRN1-205ENST00000425819 KSR2Q6VAB6 950 aa20■□□□□ 0.79
SCRN1-205ENST00000425819 LINC00116Q8NCU8 138 aa20■□□□□ 0.79
SCRN1-205ENST00000425819 MAP3K2Q9Y2U5 619 aa20■□□□□ 0.79
SCRN1-205ENST00000425819 DNAAF4Q8WXU2 420 aa19.99■□□□□ 0.79
SCRN1-205ENST00000425819 CCDC87Q9NVE4 849 aa19.99■□□□□ 0.79
SCRN1-205ENST00000425819 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
SCRN1-205ENST00000425819 INTS5Q6P9B9 1019 aaKnown RBP19.98■□□□□ 0.79
SCRN1-205ENST00000425819 RIC3Q7Z5B4 369 aa19.98■□□□□ 0.79
SCRN1-205ENST00000425819 PPP4R2Q9NY27 417 aa19.98■□□□□ 0.79
SCRN1-205ENST00000425819 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
SCRN1-205ENST00000425819 CCT4P50991 539 aaKnown RBP19.97■□□□□ 0.79
SCRN1-205ENST00000425819 TTLL7Q6ZT98 887 aa19.97■□□□□ 0.79
SCRN1-205ENST00000425819 ANKRD13DQ6ZTN6 518 aa19.97■□□□□ 0.79
SCRN1-205ENST00000425819 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
SCRN1-205ENST00000425819 APBA3O96018 575 aa19.96■□□□□ 0.79
SCRN1-205ENST00000425819 LY75O60449 1722 aa19.95■□□□□ 0.78
SCRN1-205ENST00000425819 IL6STP40189 918 aaPredicted RBP19.95■□□□□ 0.78
SCRN1-205ENST00000425819 ARXQ96QS3 562 aa19.95■□□□□ 0.78
SCRN1-205ENST00000425819 PXDNLA1KZ92 1463 aa19.94■□□□□ 0.78
SCRN1-205ENST00000425819 ZBTB7BO15156 539 aaPredicted RBP19.94■□□□□ 0.78
SCRN1-205ENST00000425819 BEND3Q5T5X7 828 aa19.94■□□□□ 0.78
SCRN1-205ENST00000425819 PLBD2Q8NHP8 589 aa19.94■□□□□ 0.78
SCRN1-205ENST00000425819 LRRC4BQ9NT99 713 aa19.94■□□□□ 0.78
SCRN1-205ENST00000425819 B4GALNT3Q6L9W6 998 aa19.93■□□□□ 0.78
SCRN1-205ENST00000425819 NPM2Q86SE8 214 aaKnown RBP19.93■□□□□ 0.78
SCRN1-205ENST00000425819 SRCIN1Q9C0H9 1055 aa19.93■□□□□ 0.78
SCRN1-205ENST00000425819 ZBTB3Q9H5J0 574 aa19.93■□□□□ 0.78
SCRN1-205ENST00000425819 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
SCRN1-205ENST00000425819 COL5A3P25940 1745 aaPredicted RBP19.92■□□□□ 0.78
SCRN1-205ENST00000425819 KIF6Q6ZMV9 814 aa19.92■□□□□ 0.78
SCRN1-205ENST00000425819 EIF5P55010 431 aaKnown RBP19.91■□□□□ 0.78
SCRN1-205ENST00000425819 TXNRD1Q16881 649 aa19.91■□□□□ 0.78
SCRN1-205ENST00000425819 SLC27A3Q5K4L6 730 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms