RNA–Protein interactions for RNA: ENST00000425451.2

HDAC7-208, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-208ENST00000425451 APLP1P51693 650 aa23.84■■□□□ 1.41
HDAC7-208ENST00000425451 NFIXQ14938 502 aa23.84■■□□□ 1.41
HDAC7-208ENST00000425451 BCL2L12Q9HB09 334 aa23.84■■□□□ 1.41
HDAC7-208ENST00000425451 NARFQ9UHQ1 456 aa23.84■■□□□ 1.41
HDAC7-208ENST00000425451 ZBTB1Q9Y2K1 713 aa23.84■■□□□ 1.41
HDAC7-208ENST00000425451 DIAPH1O60610 1272 aaKnown RBP23.83■■□□□ 1.41
HDAC7-208ENST00000425451 DNAJC5GQ8N7S2 189 aa23.83■■□□□ 1.41
HDAC7-208ENST00000425451 COL15A1P39059 1388 aa23.82■■□□□ 1.4
HDAC7-208ENST00000425451 CC2D1BQ5T0F9 858 aaKnown RBP23.82■■□□□ 1.4
HDAC7-208ENST00000425451 VSIG10Q8N0Z9 540 aa23.82■■□□□ 1.4
HDAC7-208ENST00000425451 RNF181Q9P0P0 153 aa23.81■■□□□ 1.4
HDAC7-208ENST00000425451 NRXN2Q9P2S2 1712 aa23.81■■□□□ 1.4
HDAC7-208ENST00000425451 AFDNP55196 1824 aaKnown RBP23.8■■□□□ 1.4
HDAC7-208ENST00000425451 RBM46Q8TBY0 533 aaKnown RBP23.8■■□□□ 1.4
HDAC7-208ENST00000425451 UBR2Q8IWV8 1755 aa23.79■■□□□ 1.4
HDAC7-208ENST00000425451 SBF1O95248 1867 aa23.79■■□□□ 1.4
HDAC7-208ENST00000425451 COL3A1P02461 1466 aaPredicted RBP23.77■■□□□ 1.4
HDAC7-208ENST00000425451 SERPINB2P05120 415 aa23.77■■□□□ 1.4
HDAC7-208ENST00000425451 CANXP27824 592 aaKnown RBP23.76■■□□□ 1.39
HDAC7-208ENST00000425451 EIF5P55010 431 aaKnown RBP23.76■■□□□ 1.39
HDAC7-208ENST00000425451 IL17REQ8NFR9 667 aa23.76■■□□□ 1.39
HDAC7-208ENST00000425451 KDM2BQ8NHM5 1336 aa23.76■■□□□ 1.39
HDAC7-208ENST00000425451 PRELPP51888 382 aa23.75■■□□□ 1.39
HDAC7-208ENST00000425451 RRAGCQ9HB90 399 aa23.75■■□□□ 1.39
HDAC7-208ENST00000425451 RASSF7Q02833 373 aa23.74■■□□□ 1.39
HDAC7-208ENST00000425451 ZNF496Q96IT1 587 aaPredicted RBP23.74■■□□□ 1.39
HDAC7-208ENST00000425451 CARMIL3Q8ND23 1372 aa23.74■■□□□ 1.39
HDAC7-208ENST00000425451 NPC1L1Q9UHC9 1359 aa23.74■■□□□ 1.39
HDAC7-208ENST00000425451 DLEC1Q9Y238 1755 aa23.73■■□□□ 1.39
HDAC7-208ENST00000425451 STARD3NLO95772 234 aa23.73■■□□□ 1.39
HDAC7-208ENST00000425451 C16orf71Q8IYS4 520 aaPredicted RBP23.73■■□□□ 1.39
HDAC7-208ENST00000425451 TTC5Q8N0Z6 440 aa23.73■■□□□ 1.39
HDAC7-208ENST00000425451 FSTL1Q12841 308 aa23.72■■□□□ 1.39
HDAC7-208ENST00000425451 ZNF790Q6PG37 636 aa23.72■■□□□ 1.39
HDAC7-208ENST00000425451 WDR90Q96KV7 1748 aa23.71■■□□□ 1.39
HDAC7-208ENST00000425451 GNAT3A8MTJ3 354 aa23.71■■□□□ 1.39
HDAC7-208ENST00000425451 U2SURPO15042 1029 aaKnown RBP23.71■■□□□ 1.39
HDAC7-208ENST00000425451 HTRA3P83110 453 aa23.71■■□□□ 1.39
HDAC7-208ENST00000425451 C2CD5Q86YS7 1000 aa23.71■■□□□ 1.39
HDAC7-208ENST00000425451 TTLL6Q8N841 843 aa23.71■■□□□ 1.39
HDAC7-208ENST00000425451 HEG1Q9ULI3 1381 aa23.7■■□□□ 1.38
HDAC7-208ENST00000425451 BICDL1Q6ZP65 573 aa23.7■■□□□ 1.38
HDAC7-208ENST00000425451 SIPA1L3O60292 1781 aaPredicted RBP23.7■■□□□ 1.38
HDAC7-208ENST00000425451 TNRC6CQ9HCJ0 1690 aaKnown RBP23.7■■□□□ 1.38
HDAC7-208ENST00000425451 ZC3H4Q9UPT8 1303 aaKnown RBP23.69■■□□□ 1.38
HDAC7-208ENST00000425451 A0A087WZG4 1122 aa23.69■■□□□ 1.38
HDAC7-208ENST00000425451 LMNB1P20700 586 aa23.69■■□□□ 1.38
HDAC7-208ENST00000425451 TEFQ10587 303 aa23.69■■□□□ 1.38
HDAC7-208ENST00000425451 TBC1D9BQ66K14 1250 aa23.69■■□□□ 1.38
HDAC7-208ENST00000425451 GAS2L2Q8NHY3 880 aa23.69■■□□□ 1.38
HDAC7-208ENST00000425451 H0YIN7 160 aa23.68■■□□□ 1.38
HDAC7-208ENST00000425451 CNGB1Q14028 1251 aaPredicted RBP23.68■■□□□ 1.38
HDAC7-208ENST00000425451 NFKBIEO00221 500 aa23.67■■□□□ 1.38
HDAC7-208ENST00000425451 TEX13AQ9BXU3 409 aaPredicted RBP23.67■■□□□ 1.38
HDAC7-208ENST00000425451 CEMIPQ8WUJ3 1361 aa23.66■■□□□ 1.38
HDAC7-208ENST00000425451 PHACTR3Q96KR7 559 aa23.66■■□□□ 1.38
HDAC7-208ENST00000425451 TBC1D2BQ9UPU7 963 aa23.66■■□□□ 1.38
HDAC7-208ENST00000425451 ANKRD31Q8N7Z5 1873 aa23.65■■□□□ 1.38
HDAC7-208ENST00000425451 GLTPD2A6NH11 291 aa23.65■■□□□ 1.38
HDAC7-208ENST00000425451 A1BGP04217 495 aa23.65■■□□□ 1.38
HDAC7-208ENST00000425451 IL6STP40189 918 aaPredicted RBP23.65■■□□□ 1.38
HDAC7-208ENST00000425451 KLRG1Q96E93 195 aa23.65■■□□□ 1.38
HDAC7-208ENST00000425451 SCN7AQ01118 1682 aa23.64■■□□□ 1.38
HDAC7-208ENST00000425451 KCNQ3O43525 872 aa23.64■■□□□ 1.37
HDAC7-208ENST00000425451 PRR5LQ6MZQ0 368 aa23.64■■□□□ 1.37
HDAC7-208ENST00000425451 BRIP1Q9BX63 1249 aa23.64■■□□□ 1.37
HDAC7-208ENST00000425451 CCDC24Q8N4L8 307 aa23.63■■□□□ 1.37
HDAC7-208ENST00000425451 JMYQ8N9B5 988 aa23.63■■□□□ 1.37
HDAC7-208ENST00000425451 FMNL2Q96PY5 1086 aa23.63■■□□□ 1.37
HDAC7-208ENST00000425451 SMC1BQ8NDV3 1235 aa23.62■■□□□ 1.37
HDAC7-208ENST00000425451 ZNF330Q9Y3S2 320 aaPredicted RBP23.62■■□□□ 1.37
HDAC7-208ENST00000425451 CAMTA2O94983 1202 aa23.61■■□□□ 1.37
HDAC7-208ENST00000425451 VEGFAP15692 232 aaPredicted RBP23.61■■□□□ 1.37
HDAC7-208ENST00000425451 PRKAR2BP31323 418 aa23.61■■□□□ 1.37
HDAC7-208ENST00000425451 PDE6BP35913 854 aa23.61■■□□□ 1.37
HDAC7-208ENST00000425451 RSPH6AQ9H0K4 717 aa23.61■■□□□ 1.37
HDAC7-208ENST00000425451 CCDC88AQ3V6T2 1871 aa23.61■■□□□ 1.37
HDAC7-208ENST00000425451 TIAM2Q8IVF5 1701 aa23.6■■□□□ 1.37
HDAC7-208ENST00000425451 ZNF622Q969S3 477 aaKnown RBP eCLIP23.6■■□□□ 1.37
HDAC7-208ENST00000425451 PDZRN3Q9UPQ7 1066 aa23.6■■□□□ 1.37
HDAC7-208ENST00000425451 COL11A2P13942 1736 aaPredicted RBP23.59■■□□□ 1.37
HDAC7-208ENST00000425451 BTBD11A6QL63 1104 aa23.59■■□□□ 1.37
HDAC7-208ENST00000425451 POTECB2RU33 542 aa23.59■■□□□ 1.37
HDAC7-208ENST00000425451 C21orf2O43822 256 aa23.59■■□□□ 1.37
HDAC7-208ENST00000425451 USP16Q9Y5T5 823 aa23.59■■□□□ 1.37
HDAC7-208ENST00000425451 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
HDAC7-208ENST00000425451 ZNF219Q9P2Y4 722 aaPredicted RBP23.57■■□□□ 1.36
HDAC7-208ENST00000425451 PRAMEF22A3QJZ6 481 aa23.56■■□□□ 1.36
HDAC7-208ENST00000425451 FER1L6Q2WGJ9 1857 aa23.56■■□□□ 1.36
HDAC7-208ENST00000425451 PIP4K2AP48426 406 aaPredicted RBP23.55■■□□□ 1.36
HDAC7-208ENST00000425451 DZIP3Q86Y13 1208 aaKnown RBP23.55■■□□□ 1.36
HDAC7-208ENST00000425451 CNBD1Q8NA66 436 aa23.55■■□□□ 1.36
HDAC7-208ENST00000425451 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
HDAC7-208ENST00000425451 SRGNP10124 158 aa23.54■■□□□ 1.36
HDAC7-208ENST00000425451 BCORQ6W2J9 1755 aa23.54■■□□□ 1.36
HDAC7-208ENST00000425451 ERFEQ4G0M1 354 aa23.53■■□□□ 1.36
HDAC7-208ENST00000425451 STYK1Q6J9G0 422 aa23.53■■□□□ 1.36
HDAC7-208ENST00000425451 MCM10Q7L590 875 aa23.53■■□□□ 1.36
HDAC7-208ENST00000425451 NPM2Q86SE8 214 aaKnown RBP23.53■■□□□ 1.36
HDAC7-208ENST00000425451 LTBP3Q9NS15 1303 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms