RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 DIAPH1O60610 1272 aaKnown RBP20.35■□□□□ 0.85
ATG4B-209ENST00000425239 DALRD3Q5D0E6 543 aaKnown RBP20.35■□□□□ 0.85
ATG4B-209ENST00000425239 IFFO2Q5TF58 517 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 C9orf131Q5VYM1 1079 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 VSIG10Q8N0Z9 540 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 DNAJC5GQ8N7S2 189 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 ZBTB1Q9Y2K1 713 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 UBR2Q8IWV8 1755 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 COL3A1P02461 1466 aaPredicted RBP20.35■□□□□ 0.85
ATG4B-209ENST00000425239 PCNTO95613 3336 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 SBF1O95248 1867 aa20.35■□□□□ 0.85
ATG4B-209ENST00000425239 NFIXQ14938 502 aa20.34■□□□□ 0.85
ATG4B-209ENST00000425239 CC2D1BQ5T0F9 858 aaKnown RBP20.34■□□□□ 0.85
ATG4B-209ENST00000425239 ZPR1O75312 459 aa20.33■□□□□ 0.85
ATG4B-209ENST00000425239 IL17REQ8NFR9 667 aa20.32■□□□□ 0.84
ATG4B-209ENST00000425239 COL15A1P39059 1388 aa20.32■□□□□ 0.84
ATG4B-209ENST00000425239 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
ATG4B-209ENST00000425239 PRELPP51888 382 aa20.31■□□□□ 0.84
ATG4B-209ENST00000425239 EIF5P55010 431 aaKnown RBP20.3■□□□□ 0.84
ATG4B-209ENST00000425239 SIPA1L3O60292 1781 aaPredicted RBP20.29■□□□□ 0.84
ATG4B-209ENST00000425239 SERPINB2P05120 415 aa20.28■□□□□ 0.84
ATG4B-209ENST00000425239 APLP1P51693 650 aa20.28■□□□□ 0.84
ATG4B-209ENST00000425239 DLEC1Q9Y238 1755 aa20.27■□□□□ 0.84
ATG4B-209ENST00000425239 RBM46Q8TBY0 533 aaKnown RBP20.27■□□□□ 0.84
ATG4B-209ENST00000425239 ZNF496Q96IT1 587 aaPredicted RBP20.27■□□□□ 0.84
ATG4B-209ENST00000425239 CANXP27824 592 aaKnown RBP20.26■□□□□ 0.83
ATG4B-209ENST00000425239 ZNF790Q6PG37 636 aa20.26■□□□□ 0.83
ATG4B-209ENST00000425239 RNF181Q9P0P0 153 aa20.26■□□□□ 0.83
ATG4B-209ENST00000425239 CARMIL3Q8ND23 1372 aa20.25■□□□□ 0.83
ATG4B-209ENST00000425239 CEMIPQ8WUJ3 1361 aa20.24■□□□□ 0.83
ATG4B-209ENST00000425239 HEG1Q9ULI3 1381 aa20.24■□□□□ 0.83
ATG4B-209ENST00000425239 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
ATG4B-209ENST00000425239 PHACTR3Q96KR7 559 aa20.24■□□□□ 0.83
ATG4B-209ENST00000425239 RRAGCQ9HB90 399 aa20.24■□□□□ 0.83
ATG4B-209ENST00000425239 STARD3NLO95772 234 aa20.23■□□□□ 0.83
ATG4B-209ENST00000425239 RASSF7Q02833 373 aa20.22■□□□□ 0.83
ATG4B-209ENST00000425239 TBC1D9BQ66K14 1250 aa20.22■□□□□ 0.83
ATG4B-209ENST00000425239 ANKRD31Q8N7Z5 1873 aa20.22■□□□□ 0.83
ATG4B-209ENST00000425239 U2SURPO15042 1029 aaKnown RBP20.21■□□□□ 0.83
ATG4B-209ENST00000425239 KCNQ3O43525 872 aa20.21■□□□□ 0.83
ATG4B-209ENST00000425239 TTC5Q8N0Z6 440 aa20.21■□□□□ 0.83
ATG4B-209ENST00000425239 TTLL6Q8N841 843 aa20.21■□□□□ 0.83
ATG4B-209ENST00000425239 GAS2L2Q8NHY3 880 aa20.21■□□□□ 0.83
ATG4B-209ENST00000425239 KDM2BQ8NHM5 1336 aa20.21■□□□□ 0.83
ATG4B-209ENST00000425239 WDR90Q96KV7 1748 aa20.2■□□□□ 0.82
ATG4B-209ENST00000425239 NFKBIEO00221 500 aa20.2■□□□□ 0.82
ATG4B-209ENST00000425239 IL6STP40189 918 aaPredicted RBP20.2■□□□□ 0.82
ATG4B-209ENST00000425239 FSTL1Q12841 308 aa20.2■□□□□ 0.82
ATG4B-209ENST00000425239 TEX13AQ9BXU3 409 aaPredicted RBP20.2■□□□□ 0.82
ATG4B-209ENST00000425239 RSPH6AQ9H0K4 717 aa20.2■□□□□ 0.82
ATG4B-209ENST00000425239 A0A087WZG4 1122 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 A1BGP04217 495 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 LMNB1P20700 586 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 HTRA3P83110 453 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 TEFQ10587 303 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 C2CD5Q86YS7 1000 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 TBC1D2BQ9UPU7 963 aa20.19■□□□□ 0.82
ATG4B-209ENST00000425239 ZC3H4Q9UPT8 1303 aaKnown RBP20.19■□□□□ 0.82
ATG4B-209ENST00000425239 TNRC6CQ9HCJ0 1690 aaKnown RBP20.19■□□□□ 0.82
ATG4B-209ENST00000425239 CCDC88AQ3V6T2 1871 aa20.18■□□□□ 0.82
ATG4B-209ENST00000425239 H0YIN7 160 aa20.18■□□□□ 0.82
ATG4B-209ENST00000425239 BICDL1Q6ZP65 573 aa20.18■□□□□ 0.82
ATG4B-209ENST00000425239 SCN7AQ01118 1682 aa20.17■□□□□ 0.82
ATG4B-209ENST00000425239 POTECB2RU33 542 aa20.17■□□□□ 0.82
ATG4B-209ENST00000425239 CAMTA2O94983 1202 aa20.17■□□□□ 0.82
ATG4B-209ENST00000425239 CNGB1Q14028 1251 aaPredicted RBP20.17■□□□□ 0.82
ATG4B-209ENST00000425239 PRR5LQ6MZQ0 368 aa20.17■□□□□ 0.82
ATG4B-209ENST00000425239 BRIP1Q9BX63 1249 aa20.17■□□□□ 0.82
ATG4B-209ENST00000425239 GLTPD2A6NH11 291 aa20.16■□□□□ 0.82
ATG4B-209ENST00000425239 FMNL2Q96PY5 1086 aa20.16■□□□□ 0.82
ATG4B-209ENST00000425239 USP16Q9Y5T5 823 aa20.16■□□□□ 0.82
ATG4B-209ENST00000425239 PRKAR2BP31323 418 aa20.15■□□□□ 0.82
ATG4B-209ENST00000425239 CCDC24Q8N4L8 307 aa20.15■□□□□ 0.82
ATG4B-209ENST00000425239 COL11A2P13942 1736 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-209ENST00000425239 PRAMEF22A3QJZ6 481 aa20.14■□□□□ 0.81
ATG4B-209ENST00000425239 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.81
ATG4B-209ENST00000425239 JMYQ8N9B5 988 aa20.14■□□□□ 0.81
ATG4B-209ENST00000425239 KLRG1Q96E93 195 aa20.14■□□□□ 0.81
ATG4B-209ENST00000425239 FER1L6Q2WGJ9 1857 aa20.13■□□□□ 0.81
ATG4B-209ENST00000425239 BTBD11A6QL63 1104 aa20.13■□□□□ 0.81
ATG4B-209ENST00000425239 PDE6BP35913 854 aa20.12■□□□□ 0.81
ATG4B-209ENST00000425239 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
ATG4B-209ENST00000425239 VEGFAP15692 232 aaPredicted RBP20.11■□□□□ 0.81
ATG4B-209ENST00000425239 PPP2R1AP30153 589 aa20.11■□□□□ 0.81
ATG4B-209ENST00000425239 DICER1Q9UPY3 1922 aaKnown RBP20.11■□□□□ 0.81
ATG4B-209ENST00000425239 BCORQ6W2J9 1755 aa20.11■□□□□ 0.81
ATG4B-209ENST00000425239 TIAM2Q8IVF5 1701 aa20.1■□□□□ 0.81
ATG4B-209ENST00000425239 C21orf2O43822 256 aa20.1■□□□□ 0.81
ATG4B-209ENST00000425239 PIP4K2AP48426 406 aaPredicted RBP20.1■□□□□ 0.81
ATG4B-209ENST00000425239 SMC1BQ8NDV3 1235 aa20.1■□□□□ 0.81
ATG4B-209ENST00000425239 SLX4Q8IY92 1834 aa20.1■□□□□ 0.81
ATG4B-209ENST00000425239 SRGNP10124 158 aa20.09■□□□□ 0.81
ATG4B-209ENST00000425239 MCM10Q7L590 875 aa20.09■□□□□ 0.81
ATG4B-209ENST00000425239 ZNF622Q969S3 477 aaKnown RBP eCLIP20.09■□□□□ 0.811e-6■■□□□ 11.8
ATG4B-209ENST00000425239 SETDB2Q96T68 719 aa20.09■□□□□ 0.81
ATG4B-209ENST00000425239 ZNF330Q9Y3S2 320 aaPredicted RBP20.09■□□□□ 0.81
ATG4B-209ENST00000425239 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
ATG4B-209ENST00000425239 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
ATG4B-209ENST00000425239 CLEC4GQ6UXB4 293 aa20.08■□□□□ 0.81
ATG4B-209ENST00000425239 DZIP3Q86Y13 1208 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 459 ms