RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 PTCD1O75127 700 aaKnown RBP13.16□□□□□ -0.3
MDC1-205ENST00000425072 STARD3NLO95772 234 aa13.16□□□□□ -0.3
MDC1-205ENST00000425072 ATF7IPQ6VMQ6 1270 aa13.16□□□□□ -0.3
MDC1-205ENST00000425072 BCL2L13Q9BXK5 485 aa13.16□□□□□ -0.3
MDC1-205ENST00000425072 CHMP4BQ9H444 224 aaKnown RBP13.16□□□□□ -0.3
MDC1-205ENST00000425072 HYPKQ9NX55 129 aa13.16□□□□□ -0.3
MDC1-205ENST00000425072 AAMPQ13685 434 aa13.15□□□□□ -0.3
MDC1-205ENST00000425072 FTSJ3Q8IY81 847 aaKnown RBP13.15□□□□□ -0.3
MDC1-205ENST00000425072 DZIP1LQ8IYY4 767 aaKnown RBP13.15□□□□□ -0.3
MDC1-205ENST00000425072 RBM42Q9BTD8 480 aaKnown RBP13.15□□□□□ -0.3
MDC1-205ENST00000425072 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
MDC1-205ENST00000425072 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.31
MDC1-205ENST00000425072 ERBB4Q15303 1308 aa13.14□□□□□ -0.31
MDC1-205ENST00000425072 TCERG1O14776 1098 aaKnown RBP13.14□□□□□ -0.31
MDC1-205ENST00000425072 BCL11BQ9C0K0 894 aaPredicted RBP13.14□□□□□ -0.31
MDC1-205ENST00000425072 USP16Q9Y5T5 823 aa13.14□□□□□ -0.31
MDC1-205ENST00000425072 NECTIN2Q92692 538 aa13.13□□□□□ -0.31
MDC1-205ENST00000425072 KCNQ2O43526 872 aa13.12□□□□□ -0.31
MDC1-205ENST00000425072 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
MDC1-205ENST00000425072 RGS12O14924 1447 aa13.12□□□□□ -0.31
MDC1-205ENST00000425072 EP400Q96L91 3159 aa13.12□□□□□ -0.31
MDC1-205ENST00000425072 TRIM27P14373 513 aa13.11□□□□□ -0.31
MDC1-205ENST00000425072 IRX6P78412 446 aaPredicted RBP13.11□□□□□ -0.31
MDC1-205ENST00000425072 FLIIQ13045 1269 aa13.11□□□□□ -0.31
MDC1-205ENST00000425072 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
MDC1-205ENST00000425072 CHPF2Q9P2E5 772 aa13.11□□□□□ -0.31
MDC1-205ENST00000425072 LOC102724428A0A0B4J2F2 783 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 PRAMEF22A3QJZ6 481 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 ATP6V1AP38606 617 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 SIK1P57059 783 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 FKBP5Q13451 457 aaPredicted RBP13.1□□□□□ -0.31
MDC1-205ENST00000425072 FAM182BQ5T319 152 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 CLUAP1Q96AJ1 413 aa13.1□□□□□ -0.31
MDC1-205ENST00000425072 DNAJC10Q8IXB1 793 aa13.09□□□□□ -0.31
MDC1-205ENST00000425072 PPP4R2Q9NY27 417 aa13.09□□□□□ -0.31
MDC1-205ENST00000425072 DDX19BQ9UMR2 479 aa13.09□□□□□ -0.31
MDC1-205ENST00000425072 TOGARAM1Q9Y4F4 1720 aa13.09□□□□□ -0.31
MDC1-205ENST00000425072 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
MDC1-205ENST00000425072 C20orf194Q5TEA3 1177 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 INTS3Q68E01 1043 aaKnown RBP13.08□□□□□ -0.32
MDC1-205ENST00000425072 KSR2Q6VAB6 950 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 G2E3Q7L622 706 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 PANK1Q8TE04 598 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 COG6Q9Y2V7 657 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 LRP5O75197 1615 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 DOT1LQ8TEK3 1739 aa13.08□□□□□ -0.32
MDC1-205ENST00000425072 UBR2Q8IWV8 1755 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 A1BGP04217 495 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 CYP19A1P11511 503 aaPredicted RBP13.07□□□□□ -0.32
MDC1-205ENST00000425072 MYL6BP14649 208 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 MVPQ14764 893 aaKnown RBP13.07□□□□□ -0.32
MDC1-205ENST00000425072 PDIA6Q15084 440 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 COPS6Q7L5N1 327 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 EXOC6Q8TAG9 804 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 PHAXQ9H814 394 aaKnown RBP13.07□□□□□ -0.32
MDC1-205ENST00000425072 PALLDQ8WX93 1383 aa13.07□□□□□ -0.32
MDC1-205ENST00000425072 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 TRIM37O94972 964 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 RIC3Q7Z5B4 369 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 TMEM57Q8N5G2 664 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 HDAC5Q9UQL6 1122 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 KCPQ6ZWJ8 1503 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 PAPPAQ13219 1627 aa13.06□□□□□ -0.32
MDC1-205ENST00000425072 SBF2Q86WG5 1849 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 PLSCR1O15162 318 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 RLBP1P12271 317 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 IL6STP40189 918 aaPredicted RBP13.05□□□□□ -0.32
MDC1-205ENST00000425072 AIMP1Q12904 312 aaKnown RBP13.05□□□□□ -0.32
MDC1-205ENST00000425072 RC3H1Q5TC82 1133 aaKnown RBP13.05□□□□□ -0.32
MDC1-205ENST00000425072 SLC4A10Q6U841 1118 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 ITPRIPQ8IWB1 547 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 XAGE3Q8WTP9 111 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 DNAAF4Q8WXU2 420 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 SLC4A9Q96Q91 983 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 ABCC4O15439 1325 aa13.05□□□□□ -0.32
MDC1-205ENST00000425072 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 ANXA1P04083 346 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 NEXNQ0ZGT2 675 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 PROSER3Q2NL68 480 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 SLC27A3Q5K4L6 730 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 NBPF14Q5TI25 921 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
MDC1-205ENST00000425072 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 CCDC87Q9NVE4 849 aa13.04□□□□□ -0.32
MDC1-205ENST00000425072 ZBTB7BO15156 539 aaPredicted RBP13.03□□□□□ -0.32
MDC1-205ENST00000425072 PLBD2Q8NHP8 589 aa13.03□□□□□ -0.32
MDC1-205ENST00000425072 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
MDC1-205ENST00000425072 CCNL1Q9UK58 526 aaPredicted RBP13.03□□□□□ -0.32
MDC1-205ENST00000425072 NHSQ6T4R5 1651 aa13.02□□□□□ -0.32
MDC1-205ENST00000425072 A0A087WZG4 1122 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 F6X3S4 739 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 ALDH1L1O75891 902 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 GNAI3P08754 354 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 KIF6Q6ZMV9 814 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 PTF1AQ7RTS3 328 aa13.02□□□□□ -0.33
MDC1-205ENST00000425072 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms