RNA–Protein interactions for RNA: ENST00000425020.6

VPS37A-202, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37A, Length 4,051 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-202ENST00000425020 C16orf45Q96MC5 204 aaPredicted RBP12.11□□□□□ -0.47
VPS37A-202ENST00000425020 DBF4Q9UBU7 674 aaPredicted RBP12.11□□□□□ -0.47
VPS37A-202ENST00000425020 CABLES1Q8TDN4 633 aa12.11□□□□□ -0.47
VPS37A-202ENST00000425020 GOLIM4O00461 696 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 GPTP24298 496 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 CBX1P83916 185 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 ANKLE2Q86XL3 938 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 MBD5Q9P267 1494 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 HIP1O00291 1037 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 CCDC144CPQ8IYA2 1237 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 MSH6P52701 1360 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 EIF4G3O43432 1585 aaKnown RBP12.1□□□□□ -0.47
VPS37A-202ENST00000425020 UGGT1Q9NYU2 1555 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 ERICH2A1L162 156 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 IL13P35225 146 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 SAFBQ15424 915 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPS37A-202ENST00000425020 CCDC158Q5M9N0 1113 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 MNS1Q8NEH6 495 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 SNX21Q969T3 373 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 ABCA5Q8WWZ7 1642 aa12.1□□□□□ -0.47
VPS37A-202ENST00000425020 GAS2L3Q86XJ1 694 aa12.09□□□□□ -0.47
VPS37A-202ENST00000425020 GSPT1P15170 499 aaKnown RBP12.09□□□□□ -0.47
VPS37A-202ENST00000425020 POLR3DP05423 398 aaPredicted RBP12.09□□□□□ -0.47
VPS37A-202ENST00000425020 HSP90AA4PQ58FG1 418 aa12.09□□□□□ -0.47
VPS37A-202ENST00000425020 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
VPS37A-202ENST00000425020 C17orf53Q8N3J3 647 aaPredicted RBP12.09□□□□□ -0.47
VPS37A-202ENST00000425020 RBSNQ9H1K0 784 aa12.09□□□□□ -0.47
VPS37A-202ENST00000425020 LETM1O95202 739 aaPredicted RBP12.08□□□□□ -0.48
VPS37A-202ENST00000425020 SERPINC1P01008 464 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 CLCN1P35523 988 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 TNNT3P45378 269 aaPredicted RBP12.08□□□□□ -0.48
VPS37A-202ENST00000425020 CCDC183Q5T5S1 534 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 PPP6R1Q9UPN7 881 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 HSP90AB3PQ58FF7 597 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 BRF1Q92994 677 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 TMX1Q9H3N1 280 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 ATP8B2P98198 1209 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 NCBP3Q53F19 620 aaKnown RBP12.08□□□□□ -0.48
VPS37A-202ENST00000425020 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 SHANK2Q9UPX8 1470 aa12.08□□□□□ -0.48
VPS37A-202ENST00000425020 AK2P54819 239 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 ABCF2Q9UG63 623 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 CHMLP26374 656 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 LGR6Q9HBX8 967 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 SPDYE4A6NLX3 237 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 G3V3G9 751 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 RBM25P49756 843 aaKnown RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 DCAF8Q5TAQ9 597 aa12.07□□□□□ -0.48
VPS37A-202ENST00000425020 LARP1Q6PKG0 1096 aaKnown RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 ZSCAN31Q96LW9 406 aaPredicted RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
VPS37A-202ENST00000425020 IFIT1P09914 478 aaKnown RBP12.06□□□□□ -0.48
VPS37A-202ENST00000425020 BICDL1Q6ZP65 573 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 CCDC112Q8NEF3 446 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 XAGE3Q8WTP9 111 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 NAT10Q9H0A0 1025 aaKnown RBP12.06□□□□□ -0.48
VPS37A-202ENST00000425020 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 KDM5CP41229 1560 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 BCORL1Q5H9F3 1711 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 LRSAM1Q6UWE0 723 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 RRP9O43818 475 aaKnown RBP12.06□□□□□ -0.48
VPS37A-202ENST00000425020 IGSF3O75054 1194 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 HMGN5P82970 282 aaKnown RBP12.06□□□□□ -0.48
VPS37A-202ENST00000425020 OLFM4Q6UX06 510 aa12.06□□□□□ -0.48
VPS37A-202ENST00000425020 GCC2Q8IWJ2 1684 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 TSR1Q2NL82 804 aaKnown RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 PALD1Q9ULE6 856 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 SLC4A8Q2Y0W8 1093 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 ANKRD24Q8TF21 1146 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 NOC3LQ8WTT2 800 aaKnown RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 ZNF396Q96N95 335 aaPredicted RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 WDR7Q9Y4E6 1490 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 GADD45BO75293 160 aaPredicted RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 ZSCAN22P10073 491 aaPredicted RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 KIF6Q6ZMV9 814 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 EDC3Q96F86 508 aaKnown RBP12.05□□□□□ -0.48
VPS37A-202ENST00000425020 PKNOX2Q96KN3 472 aa12.05□□□□□ -0.48
VPS37A-202ENST00000425020 YTHDC2Q9H6S0 1430 aaKnown RBP12.04□□□□□ -0.48
VPS37A-202ENST00000425020 ZNF165P49910 485 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 METTL24Q5JXM2 366 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 DACT1Q9NYF0 836 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 KCNA6P17658 529 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 NFATC2IPQ8NCF5 419 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 TSC1Q92574 1164 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 NPATQ14207 1427 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 TPM1P09493 284 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 MPHOSPH8Q99549 860 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.04□□□□□ -0.48
VPS37A-202ENST00000425020 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
VPS37A-202ENST00000425020 V9GYY5 206 aaPredicted RBP12.04□□□□□ -0.48
VPS37A-202ENST00000425020 NPC1L1Q9UHC9 1359 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 CEP170Q5SW79 1584 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 NUTM2BA6NNL0 878 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 NUTM2EB1AL46 878 aaPredicted RBP12.03□□□□□ -0.48
VPS37A-202ENST00000425020 KCNQ3O43525 872 aa12.03□□□□□ -0.48
VPS37A-202ENST00000425020 KLHL10Q6JEL2 608 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms