RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 VSIG10Q8N0Z9 540 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 CCDC87Q9NVE4 849 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 POLD1P28340 1107 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 TSHZ2Q9NRE2 1034 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 CAMTA1Q9Y6Y1 1673 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 TMEM57Q8N5G2 664 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 TSPYL6Q8N831 410 aa9.03□□□□□ -0.96
LSM8-204ENST00000424702 CYP27B1O15528 508 aa9.02□□□□□ -0.96
LSM8-204ENST00000424702 TRIM37O94972 964 aa9.02□□□□□ -0.96
LSM8-204ENST00000424702 MYL6BP14649 208 aa9.02□□□□□ -0.96
LSM8-204ENST00000424702 TFCP2L1Q9NZI6 479 aa9.02□□□□□ -0.96
LSM8-204ENST00000424702 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.96
LSM8-204ENST00000424702 SLC39A6Q13433 755 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 NKX1-1Q15270 411 aaPredicted RBP9.02□□□□□ -0.97
LSM8-204ENST00000424702 SRCIN1Q9C0H9 1055 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 COL22A1Q8NFW1 1626 aaPredicted RBP9.02□□□□□ -0.97
LSM8-204ENST00000424702 ATRNO75882 1429 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 ARHGAP45Q92619 1136 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 IL17REQ8NFR9 667 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 LGR6Q9HBX8 967 aa9.02□□□□□ -0.97
LSM8-204ENST00000424702 PALLDQ8WX93 1383 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 XIRP1Q702N8 1843 aaKnown RBP9.01□□□□□ -0.97
LSM8-204ENST00000424702 LOC102724428A0A0B4J2F2 783 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 SIK1P57059 783 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 HSP90AB4PQ58FF6 505 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 TRAPPC3LQ5T215 181 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 PPP1R42Q7Z4L9 355 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 MRPL50Q8N5N7 158 aaKnown RBP9.01□□□□□ -0.97
LSM8-204ENST00000424702 DDX21Q9NR30 783 aaKnown RBP eCLIP9.01□□□□□ -0.97
LSM8-204ENST00000424702 GNPATO15228 680 aa9.01□□□□□ -0.97
LSM8-204ENST00000424702 UBTFL1P0CB47 393 aaPredicted RBP9.01□□□□□ -0.97
LSM8-204ENST00000424702 NYXQ9GZU5 481 aa9□□□□□ -0.97
LSM8-204ENST00000424702 ZNF853P0CG23 659 aa9□□□□□ -0.97
LSM8-204ENST00000424702 RBM19Q9Y4C8 960 aaKnown RBP9□□□□□ -0.97
LSM8-204ENST00000424702 LTN1O94822 1766 aa9□□□□□ -0.97
LSM8-204ENST00000424702 MEGF6O75095 1541 aa9□□□□□ -0.97
LSM8-204ENST00000424702 KRT24Q2M2I5 525 aa9□□□□□ -0.97
LSM8-204ENST00000424702 G3V3G9 751 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 EIF4A1P60842 406 aaKnown RBP8.99□□□□□ -0.97
LSM8-204ENST00000424702 DCAF8Q5TAQ9 597 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 MARCH10Q8NA82 808 aaPredicted RBP8.99□□□□□ -0.97
LSM8-204ENST00000424702 GPATCH3Q96I76 525 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 HEG1Q9ULI3 1381 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 ST5P78524 1137 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 DNAJC10Q8IXB1 793 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 DNAAF4Q8WXU2 420 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 PPP1R1BQ9UD71 204 aaPredicted RBP8.99□□□□□ -0.97
LSM8-204ENST00000424702 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 DZIP3Q86Y13 1208 aaKnown RBP8.99□□□□□ -0.97
LSM8-204ENST00000424702 ZNF496Q96IT1 587 aaPredicted RBP8.99□□□□□ -0.97
LSM8-204ENST00000424702 USP54Q70EL1 1684 aa8.99□□□□□ -0.97
LSM8-204ENST00000424702 APBB1O00213 710 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 RLBP1P12271 317 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 FLIIQ13045 1269 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 KLHL34Q8N239 644 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 TNNQ9UQP3 1299 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 PARP4Q9UKK3 1724 aaKnown RBP8.98□□□□□ -0.97
LSM8-204ENST00000424702 PIGBQ92521 554 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 NWD2Q9ULI1 1742 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 ALDH1L1O75891 902 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 PARP3Q9Y6F1 533 aa8.98□□□□□ -0.97
LSM8-204ENST00000424702 ANKRD45Q5TZF3 282 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 ANKRD13DQ6ZTN6 518 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 PHF14O94880 888 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 IL6STP40189 918 aaPredicted RBP8.97□□□□□ -0.97
LSM8-204ENST00000424702 CWC25Q9NXE8 425 aaPredicted RBP8.97□□□□□ -0.97
LSM8-204ENST00000424702 GORABQ5T7V8 394 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 XAGE3Q8WTP9 111 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
LSM8-204ENST00000424702 KSR2Q6VAB6 950 aa8.96□□□□□ -0.97
LSM8-204ENST00000424702 CHPF2Q9P2E5 772 aa8.96□□□□□ -0.97
LSM8-204ENST00000424702 GIGYF1O75420 1035 aaPredicted RBP8.96□□□□□ -0.97
LSM8-204ENST00000424702 GNAI2P04899 355 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 PDE4AP27815 886 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 KCNJ4P48050 445 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 MYD88Q99836 296 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 ASAP1Q9ULH1 1129 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 BCL9LQ86UU0 1499 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 NBPF5PQ86XG9 351 aaPredicted RBP8.96□□□□□ -0.98
LSM8-204ENST00000424702 NLGN1Q8N2Q7 840 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 PLBD2Q8NHP8 589 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 LRP6O75581 1613 aa8.96□□□□□ -0.98
LSM8-204ENST00000424702 G3BP1Q13283 466 aaKnown RBP eCLIP8.95□□□□□ -0.98
LSM8-204ENST00000424702 TXNRD1Q16881 649 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 FAM161AQ3B820 660 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 RC3H1Q5TC82 1133 aaKnown RBP8.95□□□□□ -0.98
LSM8-204ENST00000424702 COPS6Q7L5N1 327 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 GCC1Q96CN9 775 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 ZBTB3Q9H5J0 574 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 PDZRN3Q9UPQ7 1066 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 F6X3S4 739 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 CASC1Q6TDU7 716 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 TPTE2Q6XPS3 522 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 BICDL1Q6ZP65 573 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 ATG3Q9NT62 314 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 TRMT112Q9UI30 125 aaKnown RBP8.95□□□□□ -0.98
LSM8-204ENST00000424702 RPS6KA4O75676 772 aa8.95□□□□□ -0.98
LSM8-204ENST00000424702 BRPF1P55201 1214 aaPredicted RBP8.95□□□□□ -0.98
LSM8-204ENST00000424702 ERC1Q8IUD2 1116 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms