RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 VIRMAQ69YN4 1812 aaKnown RBP21.31■■□□□ 1
RPUSD3-204ENST00000424438 ZPR1O75312 459 aa21.3■■□□□ 1
RPUSD3-204ENST00000424438 PANK3Q9H999 370 aa21.3■■□□□ 1
RPUSD3-204ENST00000424438 SLC34A2O95436 690 aa21.29■■□□□ 1
RPUSD3-204ENST00000424438 CHRNA5P30532 468 aa21.29■■□□□ 1
RPUSD3-204ENST00000424438 SLC52A2Q9HAB3 445 aa21.29■■□□□ 1
RPUSD3-204ENST00000424438 NARFQ9UHQ1 456 aa21.29■■□□□ 1
RPUSD3-204ENST00000424438 CYP19A1P11511 503 aaPredicted RBP21.28■■□□□ 1
RPUSD3-204ENST00000424438 VEGFAP15692 232 aaPredicted RBP21.28■■□□□ 1
RPUSD3-204ENST00000424438 IL13P35225 146 aa21.28■■□□□ 1
RPUSD3-204ENST00000424438 SULT6B1Q6IMI4 303 aa21.28■■□□□ 1
RPUSD3-204ENST00000424438 VSIG10Q8N0Z9 540 aa21.28■■□□□ 1
RPUSD3-204ENST00000424438 LMNB1P20700 586 aa21.27■■□□□ 1
RPUSD3-204ENST00000424438 MORC1Q86VD1 984 aa21.27■■□□□ 1
RPUSD3-204ENST00000424438 DNAJC10Q8IXB1 793 aa21.27■■□□□ 1
RPUSD3-204ENST00000424438 COL15A1P39059 1388 aa21.26■□□□□ 0.99
RPUSD3-204ENST00000424438 UBR2Q8IWV8 1755 aa21.26■□□□□ 0.99
RPUSD3-204ENST00000424438 GLTPD2A6NH11 291 aa21.26■□□□□ 0.99
RPUSD3-204ENST00000424438 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
RPUSD3-204ENST00000424438 USPL1Q5W0Q7 1092 aa21.26■□□□□ 0.99
RPUSD3-204ENST00000424438 EIF4G2P78344 907 aaKnown RBP eCLIP21.25■□□□□ 0.99
RPUSD3-204ENST00000424438 NFIXQ14938 502 aa21.25■□□□□ 0.99
RPUSD3-204ENST00000424438 CCDC88AQ3V6T2 1871 aa21.25■□□□□ 0.99
RPUSD3-204ENST00000424438 TIAM2Q8IVF5 1701 aa21.25■□□□□ 0.99
RPUSD3-204ENST00000424438 DICER1Q9UPY3 1922 aaKnown RBP21.24■□□□□ 0.99
RPUSD3-204ENST00000424438 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
RPUSD3-204ENST00000424438 TTLL6Q8N841 843 aa21.23■□□□□ 0.99
RPUSD3-204ENST00000424438 POLR3GLQ9BT43 218 aa21.23■□□□□ 0.99
RPUSD3-204ENST00000424438 RNMTO43148 476 aaKnown RBP21.22■□□□□ 0.99
RPUSD3-204ENST00000424438 BCL2L12Q9HB09 334 aa21.22■□□□□ 0.99
RPUSD3-204ENST00000424438 SERPINB2P05120 415 aa21.2■□□□□ 0.98
RPUSD3-204ENST00000424438 RASSF7Q02833 373 aa21.2■□□□□ 0.98
RPUSD3-204ENST00000424438 ZBTB1Q9Y2K1 713 aa21.2■□□□□ 0.98
RPUSD3-204ENST00000424438 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
RPUSD3-204ENST00000424438 FER1L6Q2WGJ9 1857 aa21.2■□□□□ 0.98
RPUSD3-204ENST00000424438 HSPA5P11021 654 aaKnown RBP21.19■□□□□ 0.98
RPUSD3-204ENST00000424438 LGR6Q9HBX8 967 aa21.19■□□□□ 0.98
RPUSD3-204ENST00000424438 ANKRD31Q8N7Z5 1873 aa21.18■□□□□ 0.98
RPUSD3-204ENST00000424438 SCN7AQ01118 1682 aa21.18■□□□□ 0.98
RPUSD3-204ENST00000424438 A0A087WZG4 1122 aa21.17■□□□□ 0.98
RPUSD3-204ENST00000424438 H0YIN7 160 aa21.17■□□□□ 0.98
RPUSD3-204ENST00000424438 NFKBIEO00221 500 aa21.17■□□□□ 0.98
RPUSD3-204ENST00000424438 EIF5P55010 431 aaKnown RBP21.17■□□□□ 0.98
RPUSD3-204ENST00000424438 AMER1Q5JTC6 1135 aaPredicted RBP21.17■□□□□ 0.98
RPUSD3-204ENST00000424438 LTBP3Q9NS15 1303 aa21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 C2CD5Q86YS7 1000 aa21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 AIDAQ96BJ3 306 aa21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 PRDM10Q9NQV6 1147 aa21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 CREBZFQ9NS37 354 aa21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 MKRN1Q9UHC7 482 aaKnown RBP21.16■□□□□ 0.98
RPUSD3-204ENST00000424438 STARD3NLO95772 234 aa21.15■□□□□ 0.98
RPUSD3-204ENST00000424438 SLC39A6Q13433 755 aa21.15■□□□□ 0.98
RPUSD3-204ENST00000424438 DPY19L2Q6NUT2 758 aa21.15■□□□□ 0.98
RPUSD3-204ENST00000424438 CARMIL3Q8ND23 1372 aa21.14■□□□□ 0.98
RPUSD3-204ENST00000424438 BRIP1Q9BX63 1249 aa21.14■□□□□ 0.97
RPUSD3-204ENST00000424438 TEX13AQ9BXU3 409 aaPredicted RBP21.14■□□□□ 0.97
RPUSD3-204ENST00000424438 SIPA1L3O60292 1781 aaPredicted RBP21.13■□□□□ 0.97
RPUSD3-204ENST00000424438 ARFGEF2Q9Y6D5 1785 aa21.13■□□□□ 0.97
RPUSD3-204ENST00000424438 POTECB2RU33 542 aa21.13■□□□□ 0.97
RPUSD3-204ENST00000424438 PDE6BP35913 854 aa21.13■□□□□ 0.97
RPUSD3-204ENST00000424438 FOXN1O15353 648 aa21.12■□□□□ 0.97
RPUSD3-204ENST00000424438 CTCFP49711 727 aaPredicted RBP21.12■□□□□ 0.97
RPUSD3-204ENST00000424438 MTHFSDQ2M296 383 aaKnown RBP21.12■□□□□ 0.97
RPUSD3-204ENST00000424438 COL11A2P13942 1736 aaPredicted RBP21.12■□□□□ 0.97
RPUSD3-204ENST00000424438 PCDH10Q9P2E7 1040 aa21.11■□□□□ 0.97
RPUSD3-204ENST00000424438 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
RPUSD3-204ENST00000424438 HEG1Q9ULI3 1381 aa21.1■□□□□ 0.97
RPUSD3-204ENST00000424438 IL6STP40189 918 aaPredicted RBP21.09■□□□□ 0.97
RPUSD3-204ENST00000424438 CHADLQ6NUI6 762 aa21.09■□□□□ 0.97
RPUSD3-204ENST00000424438 HMOX1P09601 288 aa21.08■□□□□ 0.97
RPUSD3-204ENST00000424438 CANXP27824 592 aaKnown RBP21.08■□□□□ 0.97
RPUSD3-204ENST00000424438 FAM161AQ3B820 660 aa21.08■□□□□ 0.97
RPUSD3-204ENST00000424438 SOGA3Q5TF21 947 aa21.08■□□□□ 0.97
RPUSD3-204ENST00000424438 PRR5LQ6MZQ0 368 aa21.08■□□□□ 0.97
RPUSD3-204ENST00000424438 BCORQ6W2J9 1755 aa21.08■□□□□ 0.96
RPUSD3-204ENST00000424438 SCN4AP35499 1836 aa21.07■□□□□ 0.96
RPUSD3-204ENST00000424438 DIAPH1O60610 1272 aaKnown RBP21.07■□□□□ 0.96
RPUSD3-204ENST00000424438 ERFEQ4G0M1 354 aa21.07■□□□□ 0.96
RPUSD3-204ENST00000424438 TBC1D9BQ66K14 1250 aa21.07■□□□□ 0.96
RPUSD3-204ENST00000424438 ZNF790Q6PG37 636 aa21.07■□□□□ 0.96
RPUSD3-204ENST00000424438 STYK1Q6J9G0 422 aa21.06■□□□□ 0.96
RPUSD3-204ENST00000424438 CNKSR1Q969H4 720 aa21.06■□□□□ 0.96
RPUSD3-204ENST00000424438 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
RPUSD3-204ENST00000424438 RGL2O15211 777 aa21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 TAOK3Q9H2K8 898 aa21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 SLX4Q8IY92 1834 aa21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 CNTNAP1P78357 1384 aa21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 COL3A1P02461 1466 aaPredicted RBP21.05■□□□□ 0.96
RPUSD3-204ENST00000424438 PER1O15534 1290 aaPredicted RBP21.04■□□□□ 0.96
RPUSD3-204ENST00000424438 GAS2L2Q8NHY3 880 aa21.04■□□□□ 0.96
RPUSD3-204ENST00000424438 ZNF622Q969S3 477 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPUSD3-204ENST00000424438 CEMIPQ8WUJ3 1361 aa21.04■□□□□ 0.96
RPUSD3-204ENST00000424438 C21orf2O43822 256 aa21.03■□□□□ 0.96
RPUSD3-204ENST00000424438 TEFQ10587 303 aa21.03■□□□□ 0.96
RPUSD3-204ENST00000424438 BICDL1Q6ZP65 573 aa21.03■□□□□ 0.96
RPUSD3-204ENST00000424438 L3MBTL3Q96JM7 780 aaPredicted RBP21.03■□□□□ 0.96
RPUSD3-204ENST00000424438 GNAT3A8MTJ3 354 aa21.02■□□□□ 0.96
RPUSD3-204ENST00000424438 CAMTA2O94983 1202 aa21.02■□□□□ 0.96
RPUSD3-204ENST00000424438 SRGNP10124 158 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms