RNA–Protein interactions for RNA: ENST00000424135.5

PLOD3-204, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-204ENST00000424135 APLP1P51693 650 aa15.98■□□□□ 0.15
PLOD3-204ENST00000424135 NFIXQ14938 502 aa15.98■□□□□ 0.15
PLOD3-204ENST00000424135 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
PLOD3-204ENST00000424135 MRC1P22897 1456 aa15.97■□□□□ 0.15
PLOD3-204ENST00000424135 RASSF7Q02833 373 aa15.97■□□□□ 0.15
PLOD3-204ENST00000424135 PER1O15534 1290 aaPredicted RBP15.96■□□□□ 0.15
PLOD3-204ENST00000424135 ZPR1O75312 459 aa15.96■□□□□ 0.15
PLOD3-204ENST00000424135 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
PLOD3-204ENST00000424135 NARFQ9UHQ1 456 aa15.96■□□□□ 0.15
PLOD3-204ENST00000424135 RRAGCQ9HB90 399 aa15.95■□□□□ 0.14
PLOD3-204ENST00000424135 COL15A1P39059 1388 aa15.95■□□□□ 0.14
PLOD3-204ENST00000424135 CARMIL3Q8ND23 1372 aa15.95■□□□□ 0.14
PLOD3-204ENST00000424135 PCNTO95613 3336 aa15.94■□□□□ 0.14
PLOD3-204ENST00000424135 CANXP27824 592 aaKnown RBP15.94■□□□□ 0.14
PLOD3-204ENST00000424135 CNGB1Q14028 1251 aaPredicted RBP15.94■□□□□ 0.14
PLOD3-204ENST00000424135 RBM46Q8TBY0 533 aaKnown RBP15.94■□□□□ 0.14
PLOD3-204ENST00000424135 CCER1Q8TC90 406 aaPredicted RBP15.94■□□□□ 0.14
PLOD3-204ENST00000424135 AFDNP55196 1824 aaKnown RBP15.94■□□□□ 0.14
PLOD3-204ENST00000424135 DIAPH1O60610 1272 aaKnown RBP15.92■□□□□ 0.14
PLOD3-204ENST00000424135 SERPINB2P05120 415 aa15.92■□□□□ 0.14
PLOD3-204ENST00000424135 CCDC24Q8N4L8 307 aa15.92■□□□□ 0.14
PLOD3-204ENST00000424135 IL17REQ8NFR9 667 aa15.92■□□□□ 0.14
PLOD3-204ENST00000424135 SBF1O95248 1867 aa15.92■□□□□ 0.14
PLOD3-204ENST00000424135 VIRMAQ69YN4 1812 aaKnown RBP15.91■□□□□ 0.14
PLOD3-204ENST00000424135 COL3A1P02461 1466 aaPredicted RBP15.91■□□□□ 0.14
PLOD3-204ENST00000424135 NRXN2Q9P2S2 1712 aa15.91■□□□□ 0.14
PLOD3-204ENST00000424135 BICDL1Q6ZP65 573 aa15.91■□□□□ 0.14
PLOD3-204ENST00000424135 WDR90Q96KV7 1748 aa15.91■□□□□ 0.14
PLOD3-204ENST00000424135 EIF5P55010 431 aaKnown RBP15.9■□□□□ 0.14
PLOD3-204ENST00000424135 C2CD5Q86YS7 1000 aa15.9■□□□□ 0.14
PLOD3-204ENST00000424135 C16orf71Q8IYS4 520 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-204ENST00000424135 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
PLOD3-204ENST00000424135 ZNF496Q96IT1 587 aaPredicted RBP15.9■□□□□ 0.14
PLOD3-204ENST00000424135 KDM2BQ8NHM5 1336 aa15.9■□□□□ 0.14
PLOD3-204ENST00000424135 NFKBIEO00221 500 aa15.89■□□□□ 0.13
PLOD3-204ENST00000424135 TBC1D9BQ66K14 1250 aa15.89■□□□□ 0.13
PLOD3-204ENST00000424135 UBR2Q8IWV8 1755 aa15.89■□□□□ 0.13
PLOD3-204ENST00000424135 KCNQ3O43525 872 aa15.88■□□□□ 0.13
PLOD3-204ENST00000424135 KLRG1Q96E93 195 aa15.88■□□□□ 0.13
PLOD3-204ENST00000424135 U2SURPO15042 1029 aaKnown RBP15.87■□□□□ 0.13
PLOD3-204ENST00000424135 FSTL1Q12841 308 aa15.87■□□□□ 0.13
PLOD3-204ENST00000424135 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
PLOD3-204ENST00000424135 TBC1D2BQ9UPU7 963 aa15.87■□□□□ 0.13
PLOD3-204ENST00000424135 DLEC1Q9Y238 1755 aa15.86■□□□□ 0.13
PLOD3-204ENST00000424135 A1BGP04217 495 aa15.86■□□□□ 0.13
PLOD3-204ENST00000424135 LMNB1P20700 586 aa15.86■□□□□ 0.13
PLOD3-204ENST00000424135 PHACTR3Q96KR7 559 aa15.86■□□□□ 0.13
PLOD3-204ENST00000424135 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
PLOD3-204ENST00000424135 HEG1Q9ULI3 1381 aa15.86■□□□□ 0.13
PLOD3-204ENST00000424135 ANKRD31Q8N7Z5 1873 aa15.85■□□□□ 0.13
PLOD3-204ENST00000424135 POTECB2RU33 542 aa15.85■□□□□ 0.13
PLOD3-204ENST00000424135 STARD3NLO95772 234 aa15.85■□□□□ 0.13
PLOD3-204ENST00000424135 ZNF790Q6PG37 636 aa15.85■□□□□ 0.13
PLOD3-204ENST00000424135 TTC5Q8N0Z6 440 aa15.85■□□□□ 0.13
PLOD3-204ENST00000424135 ZNF330Q9Y3S2 320 aaPredicted RBP15.85■□□□□ 0.13
PLOD3-204ENST00000424135 TNRC6CQ9HCJ0 1690 aaKnown RBP15.84■□□□□ 0.13
PLOD3-204ENST00000424135 GLTPD2A6NH11 291 aa15.84■□□□□ 0.13
PLOD3-204ENST00000424135 H0YIN7 160 aa15.84■□□□□ 0.13
PLOD3-204ENST00000424135 PIP4K2AP48426 406 aaPredicted RBP15.84■□□□□ 0.13
PLOD3-204ENST00000424135 COL13A1Q5TAT6 717 aaPredicted RBP15.84■□□□□ 0.13
PLOD3-204ENST00000424135 PRR5LQ6MZQ0 368 aa15.84■□□□□ 0.13
PLOD3-204ENST00000424135 JMYQ8N9B5 988 aa15.84■□□□□ 0.13
PLOD3-204ENST00000424135 PRAMEF22A3QJZ6 481 aa15.83■□□□□ 0.12
PLOD3-204ENST00000424135 GNAT3A8MTJ3 354 aa15.83■□□□□ 0.12
PLOD3-204ENST00000424135 TEFQ10587 303 aa15.83■□□□□ 0.12
PLOD3-204ENST00000424135 ZNF622Q969S3 477 aaKnown RBP eCLIP15.83■□□□□ 0.12
PLOD3-204ENST00000424135 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
PLOD3-204ENST00000424135 SIPA1L3O60292 1781 aaPredicted RBP15.82■□□□□ 0.12
PLOD3-204ENST00000424135 C21orf2O43822 256 aa15.82■□□□□ 0.12
PLOD3-204ENST00000424135 CAMTA2O94983 1202 aa15.82■□□□□ 0.12
PLOD3-204ENST00000424135 SMC1BQ8NDV3 1235 aa15.82■□□□□ 0.12
PLOD3-204ENST00000424135 A0A087WZG4 1122 aa15.81■□□□□ 0.12
PLOD3-204ENST00000424135 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
PLOD3-204ENST00000424135 SCN7AQ01118 1682 aa15.81■□□□□ 0.12
PLOD3-204ENST00000424135 CCDC88AQ3V6T2 1871 aa15.81■□□□□ 0.12
PLOD3-204ENST00000424135 GAS2L2Q8NHY3 880 aa15.81■□□□□ 0.12
PLOD3-204ENST00000424135 BRIP1Q9BX63 1249 aa15.81■□□□□ 0.12
PLOD3-204ENST00000424135 ZC3H4Q9UPT8 1303 aaKnown RBP15.81■□□□□ 0.12
PLOD3-204ENST00000424135 TIAM2Q8IVF5 1701 aa15.8■□□□□ 0.12
PLOD3-204ENST00000424135 CEMIPQ8WUJ3 1361 aa15.8■□□□□ 0.12
PLOD3-204ENST00000424135 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
PLOD3-204ENST00000424135 IL6STP40189 918 aaPredicted RBP15.8■□□□□ 0.12
PLOD3-204ENST00000424135 RSPH6AQ9H0K4 717 aa15.8■□□□□ 0.12
PLOD3-204ENST00000424135 USP16Q9Y5T5 823 aa15.8■□□□□ 0.12
PLOD3-204ENST00000424135 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
PLOD3-204ENST00000424135 FMNL2Q96PY5 1086 aa15.79■□□□□ 0.12
PLOD3-204ENST00000424135 BTBD11A6QL63 1104 aa15.78■□□□□ 0.12
PLOD3-204ENST00000424135 POTEIP0CG38 1075 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 POTEJP0CG39 1038 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 PDE6BP35913 854 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 DCTN1Q14203 1278 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 ERFEQ4G0M1 354 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 SETDB2Q96T68 719 aa15.77■□□□□ 0.12
PLOD3-204ENST00000424135 TEX13AQ9BXU3 409 aaPredicted RBP15.77■□□□□ 0.12
PLOD3-204ENST00000424135 SLX4Q8IY92 1834 aa15.77■□□□□ 0.11
PLOD3-204ENST00000424135 PRPF40BQ6NWY9 871 aaKnown RBP15.76■□□□□ 0.11
PLOD3-204ENST00000424135 MCM10Q7L590 875 aa15.76■□□□□ 0.11
PLOD3-204ENST00000424135 DZIP3Q86Y13 1208 aaKnown RBP15.76■□□□□ 0.11
PLOD3-204ENST00000424135 CNBD1Q8NA66 436 aa15.76■□□□□ 0.11
PLOD3-204ENST00000424135 FER1L6Q2WGJ9 1857 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms