RNA–Protein interactions for RNA: ENST00000423670.1

SCYL3-204, Transcript of SCY1 like pseudokinase 3, humanhuman

TSL 5

Gene SCYL3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCYL3-204ENST00000423670 UBTFL1P0CB47 393 aaPredicted RBP11.43□□□□□ -0.58
SCYL3-204ENST00000423670 UPF2Q9HAU5 1272 aaKnown RBP11.43□□□□□ -0.58
SCYL3-204ENST00000423670 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
SCYL3-204ENST00000423670 SALL3Q9BXA9 1300 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 DDX21Q9NR30 783 aaKnown RBP eCLIP11.42□□□□□ -0.58
SCYL3-204ENST00000423670 USP16Q9Y5T5 823 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 SHANK3Q9BYB0 1731 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 IBTKQ9P2D0 1353 aaPredicted RBP11.42□□□□□ -0.58
SCYL3-204ENST00000423670 PARP4Q9UKK3 1724 aaKnown RBP11.42□□□□□ -0.58
SCYL3-204ENST00000423670 KSR2Q6VAB6 950 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 SSH3Q8TE77 659 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 CARD10Q9BWT7 1032 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 CHMP4AQ9BY43 222 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 STRN4Q9NRL3 753 aa11.42□□□□□ -0.58
SCYL3-204ENST00000423670 POLA2Q14181 598 aa11.41□□□□□ -0.58
SCYL3-204ENST00000423670 CWF19L2Q2TBE0 894 aaKnown RBP11.41□□□□□ -0.58
SCYL3-204ENST00000423670 PPP1R42Q7Z4L9 355 aa11.41□□□□□ -0.58
SCYL3-204ENST00000423670 ZCRB1Q8TBF4 217 aaKnown RBP11.41□□□□□ -0.58
SCYL3-204ENST00000423670 HYPKQ9NX55 129 aa11.41□□□□□ -0.58
SCYL3-204ENST00000423670 PIP4K2AP48426 406 aaPredicted RBP11.4□□□□□ -0.58
SCYL3-204ENST00000423670 TSHZ3Q63HK5 1081 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 TBC1D2Q9BYX2 928 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 SDSP20132 328 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 RBM25P49756 843 aaKnown RBP11.4□□□□□ -0.58
SCYL3-204ENST00000423670 PDE1AP54750 535 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 CABP4P57796 275 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 AIMP1Q12904 312 aaKnown RBP11.4□□□□□ -0.58
SCYL3-204ENST00000423670 KIF2CQ99661 725 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 OSBPL3Q9H4L5 887 aa11.4□□□□□ -0.58
SCYL3-204ENST00000423670 PCDH11XQ9BZA7 1347 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 PCDH11YQ9BZA8 1340 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 CDC45O75419 566 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 HSP90AB1P08238 724 aaKnown RBP11.39□□□□□ -0.59
SCYL3-204ENST00000423670 MYL6BP14649 208 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 IL2RBP14784 551 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 NKX1-1Q15270 411 aaPredicted RBP11.39□□□□□ -0.59
SCYL3-204ENST00000423670 LRRCC1Q9C099 1032 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 ROBO1Q9Y6N7 1651 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 ALDH1L1O75891 902 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 IGKV5-2P06315 115 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 SNRPA1P09661 255 aaKnown RBP11.39□□□□□ -0.59
SCYL3-204ENST00000423670 XAGE3Q8WTP9 111 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 KAZALD1Q96I82 304 aa11.39□□□□□ -0.59
SCYL3-204ENST00000423670 DAXXQ9UER7 740 aaPredicted RBP11.39□□□□□ -0.59
SCYL3-204ENST00000423670 TUBGCP6Q96RT7 1819 aa11.38□□□□□ -0.59
SCYL3-204ENST00000423670 SRGAP3O43295 1099 aa11.38□□□□□ -0.59
SCYL3-204ENST00000423670 COPS6Q7L5N1 327 aa11.38□□□□□ -0.59
SCYL3-204ENST00000423670 FMNL2Q96PY5 1086 aa11.38□□□□□ -0.59
SCYL3-204ENST00000423670 USP35Q9P2H5 1018 aa11.38□□□□□ -0.59
SCYL3-204ENST00000423670 EVA1CP58658 441 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 TTC5Q8N0Z6 440 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 DDX54Q8TDD1 881 aaKnown RBP11.37□□□□□ -0.59
SCYL3-204ENST00000423670 BTG4Q9NY30 223 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 SURF6O75683 361 aaKnown RBP11.37□□□□□ -0.59
SCYL3-204ENST00000423670 LINS1Q8NG48 757 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 IL1RAPL2Q9NP60 686 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 UBR2Q8IWV8 1755 aa11.37□□□□□ -0.59
SCYL3-204ENST00000423670 UTYO14607 1347 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 TOGARAM1Q9Y4F4 1720 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 MTX1Q13505 466 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 KCPQ6ZWJ8 1503 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 NBPF26B4DH59 902 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 MX1P20591 662 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 BECN1Q14457 450 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 NBPF14Q5TI25 921 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 NBPF10Q6P3W6 841 aaKnown RBP11.36□□□□□ -0.59
SCYL3-204ENST00000423670 NBPF15Q8N660 670 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 SUCLG2Q96I99 432 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 ANTXR1Q9H6X2 564 aa11.36□□□□□ -0.59
SCYL3-204ENST00000423670 C9orf78Q9NZ63 289 aaPredicted RBP11.36□□□□□ -0.59
SCYL3-204ENST00000423670 COL16A1Q07092 1604 aaPredicted RBP11.35□□□□□ -0.59
SCYL3-204ENST00000423670 PAPPAQ13219 1627 aa11.35□□□□□ -0.59
SCYL3-204ENST00000423670 GRM8O00222 908 aa11.35□□□□□ -0.59
SCYL3-204ENST00000423670 DDX58O95786 925 aaKnown RBP11.35□□□□□ -0.59
SCYL3-204ENST00000423670 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
SCYL3-204ENST00000423670 RHPN1Q8TCX5 695 aa11.35□□□□□ -0.59
SCYL3-204ENST00000423670 STAP2Q9UGK3 403 aa11.35□□□□□ -0.59
SCYL3-204ENST00000423670 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
SCYL3-204ENST00000423670 LAMB4A4D0S4 1761 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 NEURL1BA8MQ27 555 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 ANKRD13DQ6ZTN6 518 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 NUTM1Q86Y26 1132 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 METTL22Q9BUU2 404 aaPredicted RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 CD2BP2O95400 341 aaKnown RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 UNC5CLQ8IV45 518 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 MYD88Q99836 296 aa11.34□□□□□ -0.59
SCYL3-204ENST00000423670 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 SLKQ9H2G2 1235 aaPredicted RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 BICC1Q9H694 974 aaKnown RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 PA2G4Q9UQ80 394 aaKnown RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.34□□□□□ -0.59
SCYL3-204ENST00000423670 TNS2Q63HR2 1409 aa11.33□□□□□ -0.6
SCYL3-204ENST00000423670 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
SCYL3-204ENST00000423670 GCKRQ14397 625 aa11.33□□□□□ -0.6
SCYL3-204ENST00000423670 EPHA10Q5JZY3 1008 aa11.33□□□□□ -0.6
SCYL3-204ENST00000423670 USP26Q9BXU7 913 aa11.33□□□□□ -0.6
SCYL3-204ENST00000423670 COL22A1Q8NFW1 1626 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms