RNA–Protein interactions for RNA: ENST00000423135.1

MTHFD2P3-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase pseudogene 3, humanhuman

BASIC

Gene MTHFD2P3, Length 221 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2P3-201ENST00000423135 BCL9O00512 1426 aa13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 ATP10DQ9P241 1426 aa13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 DDX58O95786 925 aaKnown RBP13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 IGHDP01880 384 aa13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 NECTIN2Q92692 538 aa13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 TEX13AQ9BXU3 409 aaPredicted RBP13.68□□□□□ -0.22
MTHFD2P3-201ENST00000423135 PDIA6Q15084 440 aa13.67□□□□□ -0.22
MTHFD2P3-201ENST00000423135 PHAXQ9H814 394 aaKnown RBP13.67□□□□□ -0.22
MTHFD2P3-201ENST00000423135 USP21Q9UK80 565 aa13.67□□□□□ -0.22
MTHFD2P3-201ENST00000423135 CCDC9Q9Y3X0 531 aaKnown RBP13.67□□□□□ -0.22
MTHFD2P3-201ENST00000423135 GNAI3P08754 354 aa13.66□□□□□ -0.22
MTHFD2P3-201ENST00000423135 KSR2Q6VAB6 950 aa13.66□□□□□ -0.22
MTHFD2P3-201ENST00000423135 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
MTHFD2P3-201ENST00000423135 DNAAF4Q8WXU2 420 aa13.66□□□□□ -0.22
MTHFD2P3-201ENST00000423135 PIGBQ92521 554 aa13.66□□□□□ -0.22
MTHFD2P3-201ENST00000423135 PRAMEF22A3QJZ6 481 aa13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 F6X3S4 739 aa13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 MEX3CQ5U5Q3 659 aaKnown RBP13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 SLC4A10Q6U841 1118 aa13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 SMC5Q8IY18 1101 aa13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 USP16Q9Y5T5 823 aa13.65□□□□□ -0.22
MTHFD2P3-201ENST00000423135 ALDH1L1O75891 902 aa13.64□□□□□ -0.23
MTHFD2P3-201ENST00000423135 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
MTHFD2P3-201ENST00000423135 SRCIN1Q9C0H9 1055 aa13.64□□□□□ -0.23
MTHFD2P3-201ENST00000423135 HDAC5Q9UQL6 1122 aa13.64□□□□□ -0.23
MTHFD2P3-201ENST00000423135 THSD7AQ9UPZ6 1657 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ADCY9O60503 1353 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PI4KAP2A4QPH2 592 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 BEND3Q5T5X7 828 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 LRP10Q7Z4F1 713 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PI4KAP1Q8N8J0 262 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 MARCH10Q8NA82 808 aaPredicted RBP13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ATG3Q9NT62 314 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 TRPC5Q9UL62 973 aaPredicted RBP13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 DOT1LQ8TEK3 1739 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ATRNO75882 1429 aa13.63□□□□□ -0.23
MTHFD2P3-201ENST00000423135 GNAI2P04899 355 aa13.62□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PROSER3Q2NL68 480 aa13.62□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ANKRD44Q8N8A2 993 aa13.62□□□□□ -0.23
MTHFD2P3-201ENST00000423135 MEIS3Q99687 375 aa13.62□□□□□ -0.23
MTHFD2P3-201ENST00000423135 AFF2P51816 1311 aa13.62□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ONECUT3O60422 494 aaPredicted RBP13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 HMMRO75330 724 aa13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ANXA1P04083 346 aa13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 FAM98CQ17RN3 349 aaKnown RBP13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 LINS1Q8NG48 757 aa13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 GJD4Q96KN9 370 aaPredicted RBP13.61□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PTCD1O75127 700 aaKnown RBP13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 STARD3NLO95772 234 aa13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PRIM1P49642 420 aaKnown RBP13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 CEP85Q6P2H3 762 aa13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 XAGE3Q8WTP9 111 aa13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 SMARCC1Q92922 1105 aaPredicted RBP13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ASAP1Q9ULH1 1129 aa13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 MAP3K2Q9Y2U5 619 aa13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
MTHFD2P3-201ENST00000423135 KAT6BQ8WYB5 2073 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 NEXNQ0ZGT2 675 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 COPS6Q7L5N1 327 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 RIC3Q7Z5B4 369 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 PDZRN3Q9UPQ7 1066 aa13.59□□□□□ -0.23
MTHFD2P3-201ENST00000423135 UBTFL1P0CB47 393 aaPredicted RBP13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 MYL6BP14649 208 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 SIRT2Q8IXJ6 389 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 PLBD2Q8NHP8 589 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 METTL22Q9BUU2 404 aaPredicted RBP13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 DCTPP1Q9H773 170 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 C1orf115Q9H7X2 142 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 TSHZ2Q9NRE2 1034 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 ZNF831Q5JPB2 1677 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 UTYO14607 1347 aa13.58□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NBPF26B4DH59 902 aa13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 ATP8B2P98198 1209 aa13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NUCB1Q02818 461 aa13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NBPF14Q5TI25 921 aa13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NBPF10Q6P3W6 841 aaKnown RBP13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NBPF15Q8N660 670 aa13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 SYTL4Q96C24 671 aaPredicted RBP13.57□□□□□ -0.24
MTHFD2P3-201ENST00000423135 AIMP1Q12904 312 aaKnown RBP13.56□□□□□ -0.24
MTHFD2P3-201ENST00000423135 DNAJC10Q8IXB1 793 aa13.56□□□□□ -0.24
MTHFD2P3-201ENST00000423135 RBM42Q9BTD8 480 aaKnown RBP13.56□□□□□ -0.24
MTHFD2P3-201ENST00000423135 A1BGP04217 495 aa13.55□□□□□ -0.24
MTHFD2P3-201ENST00000423135 COL15A1P39059 1388 aa13.55□□□□□ -0.24
MTHFD2P3-201ENST00000423135 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
MTHFD2P3-201ENST00000423135 TJP1Q07157 1748 aa13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NEURL1BA8MQ27 555 aa13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 CYP19A1P11511 503 aaPredicted RBP13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 MTX1Q13505 466 aa13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 CHD1LQ86WJ1 897 aa13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 QTRT2Q9H974 415 aaKnown RBP13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 C9orf78Q9NZ63 289 aaPredicted RBP13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 LRRFIP2Q9Y608 721 aaKnown RBP13.54□□□□□ -0.24
MTHFD2P3-201ENST00000423135 NUP188Q5SRE5 1749 aa13.53□□□□□ -0.24
MTHFD2P3-201ENST00000423135 A0A0G2JS52 829 aa13.53□□□□□ -0.24
MTHFD2P3-201ENST00000423135 GRM8O00222 908 aa13.53□□□□□ -0.24
MTHFD2P3-201ENST00000423135 IGKV5-2P06315 115 aa13.53□□□□□ -0.24
MTHFD2P3-201ENST00000423135 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
MTHFD2P3-201ENST00000423135 RGS3P49796 1198 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms