RNA–Protein interactions for RNA: ENST00000422959.6

PHTF2-206, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PHTF2, Length 3,525 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-206ENST00000422959 VPS37CA5D8V6 355 aaPredicted RBP17.5■□□□□ 0.39
PHTF2-206ENST00000422959 PRPF40BQ6NWY9 871 aaKnown RBP17.5■□□□□ 0.39
PHTF2-206ENST00000422959 CEP170BQ9Y4F5 1589 aaPredicted RBP17.49■□□□□ 0.39
PHTF2-206ENST00000422959 TBX22Q9Y458 520 aa17.49■□□□□ 0.39
PHTF2-206ENST00000422959 GADD45BO75293 160 aaPredicted RBP17.49■□□□□ 0.39
PHTF2-206ENST00000422959 RIC3Q7Z5B4 369 aa17.49■□□□□ 0.39
PHTF2-206ENST00000422959 NECAB1Q8N987 351 aa17.49■□□□□ 0.39
PHTF2-206ENST00000422959 TTC21AQ8NDW8 1320 aa17.49■□□□□ 0.39
PHTF2-206ENST00000422959 RASEFQ8IZ41 740 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 ATP5J2-PTCD1G3V325 749 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
PHTF2-206ENST00000422959 CASTP20810 708 aaKnown RBP17.48■□□□□ 0.39
PHTF2-206ENST00000422959 CCDC83Q8IWF9 413 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 CCDC85AQ96PX6 553 aaPredicted RBP17.48■□□□□ 0.39
PHTF2-206ENST00000422959 TMEM63CQ9P1W3 806 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 MAP3K5Q99683 1374 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
PHTF2-206ENST00000422959 KIAA0232Q92628 1395 aa17.48■□□□□ 0.39
PHTF2-206ENST00000422959 MSNP26038 577 aaKnown RBP17.47■□□□□ 0.39
PHTF2-206ENST00000422959 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
PHTF2-206ENST00000422959 OVOS2A0A0J9YW53 1432 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 OVOS2Q6IE36 1432 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 CHGBP05060 677 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
PHTF2-206ENST00000422959 FAM173BQ6P4H8 233 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 CLASRPQ8N2M8 674 aaKnown RBP17.47■□□□□ 0.39
PHTF2-206ENST00000422959 ANKRD24Q8TF21 1146 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 KIF20BQ96Q89 1820 aa17.47■□□□□ 0.39
PHTF2-206ENST00000422959 JAKMIP1Q96N16 626 aaKnown RBP17.46■□□□□ 0.39
PHTF2-206ENST00000422959 GCP02774 474 aa17.46■□□□□ 0.39
PHTF2-206ENST00000422959 CDC42BPGQ6DT37 1551 aa17.46■□□□□ 0.39
PHTF2-206ENST00000422959 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.45■□□□□ 0.38
PHTF2-206ENST00000422959 ANKLE2Q86XL3 938 aa17.45■□□□□ 0.38
PHTF2-206ENST00000422959 PLEKHO1Q53GL0 409 aaPredicted RBP17.44■□□□□ 0.38
PHTF2-206ENST00000422959 PROSER2Q86WR7 435 aaPredicted RBP17.44■□□□□ 0.38
PHTF2-206ENST00000422959 RIMBP3CA6NJZ7 1639 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 RIMBP3BA6NNM3 1639 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 RIMBP3Q9UFD9 1639 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 ZNF830Q96NB3 372 aaPredicted RBP17.44■□□□□ 0.38
PHTF2-206ENST00000422959 CNPY2Q9Y2B0 182 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 COL9A3Q14050 684 aaPredicted RBP17.44■□□□□ 0.38
PHTF2-206ENST00000422959 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 NFATC2IPQ8NCF5 419 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 TLR7Q9NYK1 1049 aaKnown RBP17.44■□□□□ 0.38
PHTF2-206ENST00000422959 DIP2BQ9P265 1576 aa17.44■□□□□ 0.38
PHTF2-206ENST00000422959 PTH1RQ03431 593 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 KIF1BPQ96EK5 621 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 FAM227BQ96M60 508 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 DNAJC2Q99543 621 aaKnown RBP17.43■□□□□ 0.38
PHTF2-206ENST00000422959 ARHGEF10O15013 1369 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 PLEKHG1Q9ULL1 1385 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 AK2P54819 239 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 RBM10P98175 930 aaKnown RBP17.43■□□□□ 0.38
PHTF2-206ENST00000422959 ADCK5Q3MIX3 580 aa17.43■□□□□ 0.38
PHTF2-206ENST00000422959 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.38
PHTF2-206ENST00000422959 IP6K1Q92551 441 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 MYD88Q99836 296 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 LARGE1O95461 756 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 LRRC2Q9BYS8 371 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 SMC3Q9UQE7 1217 aa17.42■□□□□ 0.38
PHTF2-206ENST00000422959 SLFNL1Q499Z3 407 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 DNTTIP2Q5QJE6 756 aaKnown RBP17.41■□□□□ 0.38
PHTF2-206ENST00000422959 CWC22Q9HCG8 908 aaKnown RBP17.41■□□□□ 0.38
PHTF2-206ENST00000422959 IBTKQ9P2D0 1353 aaPredicted RBP17.41■□□□□ 0.38
PHTF2-206ENST00000422959 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 BEND3Q5T5X7 828 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 SPATA31D1Q6ZQQ2 1576 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 KDM4AO75164 1064 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 FGD1P98174 961 aa17.41■□□□□ 0.38
PHTF2-206ENST00000422959 BICC1Q9H694 974 aaKnown RBP17.41■□□□□ 0.38
PHTF2-206ENST00000422959 R3HCC1Q9Y3T6 440 aaKnown RBP17.41■□□□□ 0.38
PHTF2-206ENST00000422959 CEBPZQ03701 1054 aaKnown RBP17.4■□□□□ 0.38
PHTF2-206ENST00000422959 USP48Q86UV5 1035 aa17.4■□□□□ 0.38
PHTF2-206ENST00000422959 KNDC1Q76NI1 1749 aa17.4■□□□□ 0.38
PHTF2-206ENST00000422959 VIRMAQ69YN4 1812 aaKnown RBP17.4■□□□□ 0.38
PHTF2-206ENST00000422959 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
PHTF2-206ENST00000422959 COPS6Q7L5N1 327 aa17.39■□□□□ 0.38
PHTF2-206ENST00000422959 SUCLG2Q96I99 432 aa17.39■□□□□ 0.38
PHTF2-206ENST00000422959 NEUROD6Q96NK8 337 aa17.39■□□□□ 0.38
PHTF2-206ENST00000422959 SSH3Q8TE77 659 aa17.39■□□□□ 0.37
PHTF2-206ENST00000422959 DBF4Q9UBU7 674 aaPredicted RBP17.39■□□□□ 0.37
PHTF2-206ENST00000422959 SNX14Q9Y5W7 946 aa17.39■□□□□ 0.37
PHTF2-206ENST00000422959 FBXW7Q969H0 707 aa17.39■□□□□ 0.37
PHTF2-206ENST00000422959 RNMTO43148 476 aaKnown RBP17.38■□□□□ 0.37
PHTF2-206ENST00000422959 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
PHTF2-206ENST00000422959 XAGE3Q8WTP9 111 aa17.38■□□□□ 0.37
PHTF2-206ENST00000422959 USP31Q70CQ4 1352 aa17.38■□□□□ 0.37
PHTF2-206ENST00000422959 CAMK4Q16566 473 aa17.38■□□□□ 0.37
PHTF2-206ENST00000422959 PI4K2BQ8TCG2 481 aa17.37■□□□□ 0.37
PHTF2-206ENST00000422959 TFIP11Q9UBB9 837 aaKnown RBP17.37■□□□□ 0.37
PHTF2-206ENST00000422959 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.37■□□□□ 0.37
PHTF2-206ENST00000422959 CLCN1P35523 988 aa17.37■□□□□ 0.37
PHTF2-206ENST00000422959 CCDC129Q6ZRS4 1044 aa17.37■□□□□ 0.37
PHTF2-206ENST00000422959 UBE3BQ7Z3V4 1068 aa17.37■□□□□ 0.37
PHTF2-206ENST00000422959 USP16Q9Y5T5 823 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms