RNA–Protein interactions for RNA: ENST00000422832.1

HLA-DMA-204, Transcript of major histocompatibility complex, class II, DM alpha, human

Gene HLA-DMA, Length 611 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DMA-204	ENST00000422832	IL17RE	Q8NFR9	667 aa		11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	TEX13A	Q9BXU3	409 aa	Predicted RBP	11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	PIM2	Q9P1W9	311 aa		11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	C10orf71	Q711Q0	1435 aa		11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	PXDNL	A1KZ92	1463 aa		11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	KIF13B	Q9NQT8	1826 aa		11.23	□□□□□ -0.61
HLA-DMA-204	ENST00000422832		A0A087WZG4	1122 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	BTBD11	A6QL63	1104 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	COL15A1	P39059	1388 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	DDR1	Q08345	913 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	DALRD3	Q5D0E6	543 aa	Known RBP	11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	ZNF790	Q6PG37	636 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	KCP	Q6ZWJ8	1503 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	PHACTR3	Q96KR7	559 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	FMNL2	Q96PY5	1086 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	RSPH6A	Q9H0K4	717 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	NARF	Q9UHQ1	456 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	ZBTB1	Q9Y2K1	713 aa		11.22	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	TM4SF1	P30408	202 aa		11.21	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	ZNF496	Q96IT1	587 aa	Predicted RBP	11.21	□□□□□ -0.61
HLA-DMA-204	ENST00000422832	ADAMTS7	Q9UKP4	1686 aa		11.2	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	HEG1	Q9ULI3	1381 aa		11.2	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	POLRMT	O00411	1230 aa	Known RBP	11.2	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	NFIX	Q14938	502 aa		11.2	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	BICDL1	Q6ZP65	573 aa		11.2	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	UBR2	Q8IWV8	1755 aa		11.19	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	NPHP1	O15259	732 aa		11.19	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	CHRNA5	P30532	468 aa		11.19	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	KIAA1551	Q9HCM1	1747 aa		11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	SERPINB2	P05120	415 aa		11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	KCNA3	P22001	575 aa		11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	EIF5	P55010	431 aa	Known RBP	11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	MCM10	Q7L590	875 aa		11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	TBC1D2B	Q9UPU7	963 aa		11.18	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	ADCY9	O60503	1353 aa		11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	CEMIP	Q8WUJ3	1361 aa		11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	HTATSF1	O43719	755 aa	Known RBP	11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	A1BG	P04217	495 aa		11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	IL6ST	P40189	918 aa	Predicted RBP	11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	PNN	Q9H307	717 aa	Known RBP	11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	SIPA1L3	O60292	1781 aa	Predicted RBP	11.17	□□□□□ -0.62
HLA-DMA-204	ENST00000422832		H0YIN7	160 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	KCNQ3	O43525	872 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	SNRPA1	P09661	255 aa	Known RBP	11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	DCTN1	Q14203	1278 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	C9orf131	Q5VYM1	1079 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	C2CD5	Q86YS7	1000 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	BCL2L12	Q9HB09	334 aa		11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	BRCA1	P38398	1863 aa	Known RBP	11.16	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	AFDN	P55196	1824 aa	Known RBP	11.15	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	ARFGEF1	Q9Y6D6	1849 aa		11.15	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	TAF7	Q15545	349 aa	Predicted RBP	11.15	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	SETDB2	Q96T68	719 aa		11.15	□□□□□ -0.62
HLA-DMA-204	ENST00000422832	MAPK8IP3	Q9UPT6	1336 aa		11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	TBC1D9B	Q66K14	1250 aa		11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	DZIP3	Q86Y13	1208 aa	Known RBP	11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	TTLL6	Q8N841	843 aa		11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	RNF181	Q9P0P0	153 aa		11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	USP16	Q9Y5T5	823 aa		11.14	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PDE6B	P35913	854 aa		11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PIP4K2A	P48426	406 aa	Predicted RBP	11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	CNBD1	Q8NA66	436 aa		11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PNISR	Q8TF01	805 aa	Known RBP	11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	ZNF622	Q969S3	477 aa	Known RBP eCLIP	11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PDZRN3	Q9UPQ7	1066 aa		11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	ZNF652	Q9Y2D9	606 aa		11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	CARMIL3	Q8ND23	1372 aa		11.13	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	KDM2B	Q8NHM5	1336 aa		11.12	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	ST5	P78524	1137 aa		11.12	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	BRIP1	Q9BX63	1249 aa		11.12	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	MIS18A	Q9NYP9	233 aa		11.12	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PRAMEF22	A3QJZ6	481 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	KIF3C	O14782	793 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	CAMTA2	O94983	1202 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	RALBP1	Q15311	655 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	NFE2L2	Q16236	605 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	NBPF5P	Q86XG9	351 aa	Predicted RBP	11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	CCDC24	Q8N4L8	307 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	NRXN2	Q9P2S2	1712 aa		11.11	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	TOMM70	O94826	608 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	HSPA6	P17066	643 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	LMNB1	P20700	586 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	DDX10	Q13206	875 aa	Known RBP	11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PRR5L	Q6MZQ0	368 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	NMRK2	Q9NPI5	230 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	ZNF219	Q9P2Y4	722 aa	Predicted RBP	11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	SCN7A	Q01118	1682 aa		11.1	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	DLG5	Q8TDM6	1919 aa		11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	GTF2E1	P29083	439 aa	Predicted RBP	11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	RASSF7	Q02833	373 aa		11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	CLEC4G	Q6UXB4	293 aa		11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	NGEF	Q8N5V2	710 aa		11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	PLEKHF1	Q96S99	279 aa		11.09	□□□□□ -0.63
HLA-DMA-204	ENST00000422832	DLEC1	Q9Y238	1755 aa		11.08	□□□□□ -0.64
HLA-DMA-204	ENST00000422832	FAM177B	A6PVY3	158 aa		11.08	□□□□□ -0.64
HLA-DMA-204	ENST00000422832	C21orf2	O43822	256 aa		11.08	□□□□□ -0.64
HLA-DMA-204	ENST00000422832	TPTE2	Q6XPS3	522 aa		11.08	□□□□□ -0.64
HLA-DMA-204	ENST00000422832	CNKSR1	Q969H4	720 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms