RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 SRCIN1Q9C0H9 1055 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 SLIT1O75093 1534 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 SRGAP3O43295 1099 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 LARP6Q9BRS8 491 aaKnown RBP19.2■□□□□ 0.66
CDH1-202ENST00000422392 GDPD2Q9HCC8 539 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
CDH1-202ENST00000422392 ARHGAP23Q9P227 1491 aa19.19■□□□□ 0.66
CDH1-202ENST00000422392 MCM2P49736 904 aa19.19■□□□□ 0.66
CDH1-202ENST00000422392 NBPF6Q5VWK0 638 aa19.19■□□□□ 0.66
CDH1-202ENST00000422392 NBPF4Q96M43 638 aa19.19■□□□□ 0.66
CDH1-202ENST00000422392 ANAPC15P60006 121 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 RHPN1Q8TCX5 695 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 RGPD2P0DJD1 1756 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 PI4KAP2A4QPH2 592 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 PI4KAP1Q8N8J0 262 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 PI4K2BQ8TCG2 481 aa19.18■□□□□ 0.66
CDH1-202ENST00000422392 PXDNLA1KZ92 1463 aa19.17■□□□□ 0.66
CDH1-202ENST00000422392 ZSCAN30Q86W11 494 aa19.17■□□□□ 0.66
CDH1-202ENST00000422392 DTNBO60941 627 aa19.17■□□□□ 0.66
CDH1-202ENST00000422392 TPRNQ4KMQ1 711 aa19.17■□□□□ 0.66
CDH1-202ENST00000422392 RNF214Q8ND24 703 aa19.17■□□□□ 0.66
CDH1-202ENST00000422392 EIF4A1P60842 406 aaKnown RBP19.16■□□□□ 0.66
CDH1-202ENST00000422392 POLA2Q14181 598 aa19.16■□□□□ 0.66
CDH1-202ENST00000422392 LRSAM1Q6UWE0 723 aa19.16■□□□□ 0.66
CDH1-202ENST00000422392 HSPA4P34932 840 aa19.15■□□□□ 0.66
CDH1-202ENST00000422392 THEMISQ8N1K5 641 aaPredicted RBP19.15■□□□□ 0.66
CDH1-202ENST00000422392 LRRC59Q96AG4 307 aaKnown RBP19.15■□□□□ 0.66
CDH1-202ENST00000422392 GADD45BO75293 160 aaPredicted RBP19.14■□□□□ 0.65
CDH1-202ENST00000422392 MSNP26038 577 aaKnown RBP19.14■□□□□ 0.65
CDH1-202ENST00000422392 CWC27Q6UX04 472 aaKnown RBP19.14■□□□□ 0.65
CDH1-202ENST00000422392 INTS4Q96HW7 963 aaKnown RBP19.14■□□□□ 0.65
CDH1-202ENST00000422392 SPG7Q9UQ90 795 aa19.14■□□□□ 0.65
CDH1-202ENST00000422392 BEND3Q5T5X7 828 aa19.14■□□□□ 0.65
CDH1-202ENST00000422392 MPRIPQ6WCQ1 1025 aa19.14■□□□□ 0.65
CDH1-202ENST00000422392 DNAAF4Q8WXU2 420 aa19.14■□□□□ 0.65
CDH1-202ENST00000422392 CEMIPQ8WUJ3 1361 aa19.14■□□□□ 0.65
CDH1-202ENST00000422392 RASEFQ8IZ41 740 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 BABAM1Q9NWV8 329 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 AOX1Q06278 1338 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 ANKARQ7Z5J8 1434 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 CPA1P15085 419 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 KIF1BPQ96EK5 621 aa19.13■□□□□ 0.65
CDH1-202ENST00000422392 SGSM2O43147 1006 aa19.12■□□□□ 0.65
CDH1-202ENST00000422392 PDLIM2Q96JY6 352 aa19.12■□□□□ 0.65
CDH1-202ENST00000422392 PHF8Q9UPP1 1060 aa19.12■□□□□ 0.65
CDH1-202ENST00000422392 SNX14Q9Y5W7 946 aa19.12■□□□□ 0.65
CDH1-202ENST00000422392 RAD50Q92878 1312 aa19.12■□□□□ 0.65
CDH1-202ENST00000422392 OS9Q13438 667 aaPredicted RBP19.11■□□□□ 0.65
CDH1-202ENST00000422392 IP6K1Q92551 441 aa19.11■□□□□ 0.65
CDH1-202ENST00000422392 MBD3O95983 291 aa19.11■□□□□ 0.65
CDH1-202ENST00000422392 LSG1Q9H089 658 aaKnown RBP19.11■□□□□ 0.65
CDH1-202ENST00000422392 FER1L4A9Z1Z3 1794 aa19.11■□□□□ 0.65
CDH1-202ENST00000422392 KDM3BQ7LBC6 1761 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.1■□□□□ 0.65
CDH1-202ENST00000422392 ADCY9O60503 1353 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 PRAMEF22A3QJZ6 481 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 TEFQ10587 303 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 KIAA1211Q6ZU35 1233 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 CNTROBQ8N137 903 aa19.1■□□□□ 0.65
CDH1-202ENST00000422392 AK2P54819 239 aa19.09■□□□□ 0.65
CDH1-202ENST00000422392 PROSER3Q2NL68 480 aa19.09■□□□□ 0.65
CDH1-202ENST00000422392 ZNF530Q6P9A1 599 aaPredicted RBP19.09■□□□□ 0.65
CDH1-202ENST00000422392 IL17RAQ96F46 866 aa19.09■□□□□ 0.65
CDH1-202ENST00000422392 PA2G4Q9UQ80 394 aaKnown RBP19.09■□□□□ 0.65
CDH1-202ENST00000422392 USP54Q70EL1 1684 aa19.09■□□□□ 0.65
CDH1-202ENST00000422392 RPAP1Q9BWH6 1393 aaPredicted RBP19.09■□□□□ 0.65
CDH1-202ENST00000422392 XPCQ01831 940 aaPredicted RBP19.08■□□□□ 0.64
CDH1-202ENST00000422392 DDX54Q8TDD1 881 aaKnown RBP19.07■□□□□ 0.64
CDH1-202ENST00000422392 MED1Q15648 1581 aaPredicted RBP19.07■□□□□ 0.64
CDH1-202ENST00000422392 CWF19L2Q2TBE0 894 aaKnown RBP19.07■□□□□ 0.64
CDH1-202ENST00000422392 RUFY3Q7L099 469 aa19.07■□□□□ 0.64
CDH1-202ENST00000422392 TTC14Q96N46 770 aa19.07■□□□□ 0.64
CDH1-202ENST00000422392 MAP3K2Q9Y2U5 619 aa19.07■□□□□ 0.64
CDH1-202ENST00000422392 WDR33Q9C0J8 1336 aaKnown RBP19.06■□□□□ 0.64
CDH1-202ENST00000422392 LARGE1O95461 756 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 ESCO1Q5FWF5 840 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 NOL7Q9UMY1 257 aaKnown RBP19.06■□□□□ 0.64
CDH1-202ENST00000422392 CNPY2Q9Y2B0 182 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 CASTP20810 708 aaKnown RBP19.06■□□□□ 0.64
CDH1-202ENST00000422392 PTH1RQ03431 593 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 PSME1Q06323 249 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 NFAT5O94916 1531 aa19.06■□□□□ 0.64
CDH1-202ENST00000422392 C9orf78Q9NZ63 289 aaPredicted RBP19.05■□□□□ 0.64
CDH1-202ENST00000422392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.05■□□□□ 0.64
CDH1-202ENST00000422392 PXDNQ92626 1479 aa19.05■□□□□ 0.64
CDH1-202ENST00000422392 ADCK5Q3MIX3 580 aa19.05■□□□□ 0.64
CDH1-202ENST00000422392 TSPY26PQ9H489 355 aa19.05■□□□□ 0.64
CDH1-202ENST00000422392 OFD1O75665 1012 aa19.04■□□□□ 0.64
CDH1-202ENST00000422392 DIAPH3Q9NSV4 1193 aa19.04■□□□□ 0.64
CDH1-202ENST00000422392 AKAP4Q5JQC9 854 aa19.04■□□□□ 0.64
CDH1-202ENST00000422392 SYT1P21579 422 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 MPNDQ8N594 471 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 GLRX3O76003 335 aaKnown RBP19.03■□□□□ 0.64
CDH1-202ENST00000422392 HOXB7P09629 217 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 HSP90AA2PQ14568 343 aaPredicted RBP19.03■□□□□ 0.64
CDH1-202ENST00000422392 HS1BP3Q53T59 392 aa19.03■□□□□ 0.64
CDH1-202ENST00000422392 PRPF40BQ6NWY9 871 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms