RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 C6orf229H3BNL8 230 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 IQCA1Q86XH1 822 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-203ENST00000422202 IL1RAPL2Q9NP60 686 aa15.69■□□□□ 0.1
COL20A1-203ENST00000422202 SREK1Q8WXA9 508 aaKnown RBP15.69■□□□□ 0.1
COL20A1-203ENST00000422202 SSRP1Q08945 709 aaKnown RBP15.69■□□□□ 0.1
COL20A1-203ENST00000422202 ANKLE2Q86XL3 938 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 CTCFLQ8NI51 663 aaPredicted RBP15.68■□□□□ 0.1
COL20A1-203ENST00000422202 ZNF622Q969S3 477 aaKnown RBP eCLIP15.68■□□□□ 0.1
COL20A1-203ENST00000422202 IFIT1P09914 478 aaKnown RBP15.68■□□□□ 0.1
COL20A1-203ENST00000422202 ODF2LQ9ULJ1 636 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 MROH2BQ7Z745 1585 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 MYO1BO43795 1136 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 SMARCA4P51532 1647 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 SLC12A7Q9Y666 1083 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 RRS1Q15050 365 aaKnown RBP15.68■□□□□ 0.1
COL20A1-203ENST00000422202 UBXN4Q92575 508 aa15.68■□□□□ 0.1
COL20A1-203ENST00000422202 BIN2Q9UBW5 565 aaPredicted RBP15.68■□□□□ 0.1
COL20A1-203ENST00000422202 MCM3P25205 808 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 CFAP65Q6ZU64 1925 aaKnown RBP15.67■□□□□ 0.1
COL20A1-203ENST00000422202 USO1O60763 962 aaKnown RBP15.67■□□□□ 0.1
COL20A1-203ENST00000422202 KIF20AO95235 890 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 CCDC144CPQ8IYA2 1237 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 PAIP2Q9BPZ3 127 aaKnown RBP15.67■□□□□ 0.1
COL20A1-203ENST00000422202 A0A1W2PRG0 241 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 DPH6Q7L8W6 267 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 PSMC4P43686 418 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 KIF4BQ2VIQ3 1234 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 CATIPQ7Z7H3 387 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 CALML4Q96GE6 196 aa15.67■□□□□ 0.1
COL20A1-203ENST00000422202 CCDC175P0C221 793 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 PLS1Q14651 629 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 MAP3K11Q16584 847 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 CCDC196A0A1B0GTZ2 297 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 SLC5A1P13866 664 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 PAFAH1B1P43034 410 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 ACTN2P35609 894 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 WWC3Q9ULE0 1092 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 TTC21AQ8NDW8 1320 aa15.66■□□□□ 0.1
COL20A1-203ENST00000422202 MTIF2P46199 727 aaKnown RBP15.65■□□□□ 0.1
COL20A1-203ENST00000422202 TERF1P54274 439 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 MAP3K12Q12852 859 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 GBP3Q9H0R5 595 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 MIS18AQ9NYP9 233 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 CCDC174Q6PII3 467 aa15.65■□□□□ 0.1
COL20A1-203ENST00000422202 TOP1P11387 765 aaKnown RBP15.65■□□□□ 0.1
COL20A1-203ENST00000422202 GNAT3A8MTJ3 354 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 SLU7O95391 586 aaKnown RBP15.64■□□□□ 0.09
COL20A1-203ENST00000422202 MYD88Q99836 296 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 BOLA2Q9H3K6 86 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 ZNF213O14771 459 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 NDC80O14777 642 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 TAF12Q16514 161 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 IFIT5Q13325 482 aaKnown RBP15.64■□□□□ 0.09
COL20A1-203ENST00000422202 C8orf76Q96K31 380 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 BEGAINQ9BUH8 593 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 PPP6R1Q9UPN7 881 aa15.64■□□□□ 0.09
COL20A1-203ENST00000422202 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 STXBP4Q6ZWJ1 553 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 ZSCAN31Q96LW9 406 aaPredicted RBP15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CCDC194A0A1B0GVG4 234 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 PHAXQ9H814 394 aaKnown RBP15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CCDC83Q8IWF9 413 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CUX1P39880 1505 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 MXRA7P84157 204 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 C6orf163Q5TEZ5 329 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CNNM3Q8NE01 707 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 ZSCAN12O43309 604 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 CCDC40Q4G0X9 1142 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 FAM212AQ96EL1 285 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 PTPN14Q15678 1187 aa15.63■□□□□ 0.09
COL20A1-203ENST00000422202 TBC1D5Q92609 795 aa15.62■□□□□ 0.09
COL20A1-203ENST00000422202 PHACTR2O75167 634 aa15.62■□□□□ 0.09
COL20A1-203ENST00000422202 ZNF692Q9BU19 519 aaPredicted RBP15.62■□□□□ 0.09
COL20A1-203ENST00000422202 URI1O94763 535 aaPredicted RBP15.62■□□□□ 0.09
COL20A1-203ENST00000422202 ALS2CR12Q96Q35 445 aa15.62■□□□□ 0.09
COL20A1-203ENST00000422202 CABP5Q9NP86 173 aa15.62■□□□□ 0.09
COL20A1-203ENST00000422202 IFIT3O14879 490 aaKnown RBP15.62■□□□□ 0.09
COL20A1-203ENST00000422202 NAA15Q9BXJ9 866 aaKnown RBP15.62■□□□□ 0.09
COL20A1-203ENST00000422202 AMPD3Q01432 767 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 MICALCLQ6ZW33 695 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 POLR3GO15318 223 aaPredicted RBP15.61■□□□□ 0.09
COL20A1-203ENST00000422202 STX6O43752 255 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 SFPQP23246 707 aaKnown RBP eCLIP15.61■□□□□ 0.09
COL20A1-203ENST00000422202 RBM25P49756 843 aaKnown RBP15.61■□□□□ 0.09
COL20A1-203ENST00000422202 CFAP58Q5T655 872 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 MAATS1Q7Z4T9 603 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 CCDC63Q8NA47 563 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 CTR9Q6PD62 1173 aa15.61■□□□□ 0.09
COL20A1-203ENST00000422202 TCP11L1Q9NUJ3 509 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 TRMT112Q9UI30 125 aaKnown RBP15.6■□□□□ 0.09
COL20A1-203ENST00000422202 RTEL1-TNFRSF6BF6WH68 1400 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 CCDC160A6NGH7 325 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 HLA-DOAP06340 250 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 GRPEL1Q9HAV7 217 aa15.6■□□□□ 0.09
COL20A1-203ENST00000422202 FANCIQ9NVI1 1328 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms